Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.0e-49 198.7 96 100.0
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.0e-46 188.7 96 94.8
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 5.0e-37 157.5 108 73.1
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.1e-35 152.1 81 87.7
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 6.0e-30 134.0 97 67.0
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 1.3e-29 132.9 107 58.9
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 1.3e-29 132.9 103 64.1
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 3.0e-29 131.7 103 64.1
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 8.6e-29 130.2 102 62.7
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 1.1e-28 129.8 78 74.4
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.9e-28 129.0 101 62.4
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 2.5e-28 128.6 104 60.6
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 2.5e-28 128.6 80 71.2
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 2.5e-28 128.6 79 74.7
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 3.3e-28 128.3 78 73.1
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 4.3e-28 127.9 78 69.2
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 5.6e-28 127.5 101 62.4
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 5.6e-28 127.5 104 57.7
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 5.6e-28 127.5 78 74.4
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 1.6e-27 125.9 78 73.1
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 2.1e-27 125.6 101 60.4
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 2.1e-27 125.6 78 71.8
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 2.8e-27 125.2 108 57.4
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 4.7e-27 124.4 109 54.1
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 6.2e-27 124.0 78 71.8
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 6.2e-27 124.0 78 71.8
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 6.2e-27 124.0 103 61.2
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 8.0e-27 123.6 97 63.9
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 8.0e-27 123.6 104 57.7
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 1.1e-26 123.2 107 54.2
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 1.4e-26 122.9 99 59.6
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 1.4e-26 122.9 77 70.1
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 1.8e-26 122.5 77 68.8
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.8e-26 122.5 105 59.0
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 2.3e-26 122.1 107 55.1
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 3.1e-26 121.7 103 57.3
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 3.1e-26 121.7 102 59.8
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 4.0e-26 121.3 76 69.7
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 4.0e-26 121.3 100 60.0
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 5.2e-26 120.9 101 59.4
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 5.2e-26 120.9 105 57.1
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 6.8e-26 120.6 105 57.1
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 8.9e-26 120.2 78 69.2
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 8.9e-26 120.2 100 57.0
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 1.2e-25 119.8 103 60.2
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 1.2e-25 119.8 78 67.9
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 1.5e-25 119.4 79 67.1
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 1.5e-25 119.4 100 60.0
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 2.0e-25 119.0 100 59.0
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 2.0e-25 119.0 100 59.0
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 3.4e-25 118.2 75 69.3
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 3.4e-25 118.2 77 66.2
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 5.8e-25 117.5 107 51.4
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 5.8e-25 117.5 103 56.3
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 5.8e-25 117.5 107 53.3
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 7.5e-25 117.1 78 65.4
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 9.8e-25 116.7 75 66.7
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 1.3e-24 116.3 78 65.4
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 1.3e-24 116.3 81 69.1
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 1.7e-24 115.9 77 66.2
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 1.7e-24 115.9 78 66.7
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 1.7e-24 115.9 96 58.3
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 1.7e-24 115.9 78 67.9
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.7e-24 114.8 77 68.8
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.7e-24 114.8 77 68.8
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 3.7e-24 114.8 77 68.8
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 6.4e-24 114.0 78 64.1
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 6.4e-24 114.0 72 66.7
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 6.4e-24 114.0 77 66.2
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 8.3e-24 113.6 105 52.4
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 1.4e-23 112.8 77 66.2
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 1.9e-23 112.5 109 52.3
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 1.9e-23 112.5 77 67.5
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 5.4e-23 110.9 73 64.4
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 5.4e-23 110.9 77 67.5
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 5.4e-23 110.9 77 67.5
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.1e-22 109.0 78 65.4
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 4.6e-22 107.8 75 60.0
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 2.3e-21 105.5 79 59.5
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 2.3e-21 105.5 109 46.8
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 3.0e-21 105.1 81 59.3
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 5.1e-21 104.4 103 49.5
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 1.1e-20 103.2 78 64.1
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.5e-20 102.1 77 63.6
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 3.3e-20 101.7 77 62.3
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 4.3e-20 101.3 77 62.3
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 4.3e-20 101.3 73 58.9
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 1.2e-19 99.8 70 64.3
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 1.2e-19 99.8 70 64.3
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 1.6e-19 99.4 73 63.0
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 2.1e-19 99.0 75 56.0
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 5.2e-18 94.4 95 49.5
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 5.2e-18 94.4 95 49.5
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 8.9e-18 93.6 78 55.1
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 2.0e-17 92.4 103 47.6
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 2.0e-17 92.4 78 55.1
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 2.0e-17 92.4 73 54.8
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 2.6e-17 92.0 78 53.8
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 2.6e-17 92.0 103 46.6
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 4.4e-17 91.3 103 46.6
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 5.8e-17 90.9 76 48.7
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 5.8e-17 90.9 78 52.6
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 5.8e-17 90.9 78 52.6
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 5.8e-17 90.9 79 51.9
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 1.3e-16 89.7 78 51.3
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 1.7e-16 89.4 103 44.7
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 1.7e-16 89.4 103 44.7
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 2.2e-16 89.0 78 52.6
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 3.7e-16 88.2 78 50.0
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 3.7e-16 88.2 72 52.8
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 4.9e-16 87.8 75 49.3
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 1.4e-15 86.3 78 50.0
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 1.4e-15 86.3 78 50.0
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 1.4e-15 86.3 105 43.8
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 1.4e-15 86.3 107 43.0
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 2.7e-14 82.0 74 51.4
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 7.3e-12 73.9 69 53.6
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 3.6e-11 71.6 40 77.5
Lsat_1_v5_gn_2_96480 Lactuca sativa HOM05D006227 ORTHO05D007714 4.7e-11 71.2 53 60.4
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 6.2e-11 70.9 40 75.0
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 1.4e-10 69.7 40 75.0
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 8.4e-08 60.5 78 38.5
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 1.9e-07 59.3 37 67.6
Manes.04G009950 Manihot esculenta HOM05D006227 ORTHO05D007714 4.2e-07 58.2 40 62.5
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 5.4e-07 57.8 79 35.4
RcHm_v2.0_Chr4g0411551 Rosa chinensis HOM05D000001 ORTHO05D000003 1.6e-06 56.2 61 47.5


User provided reference genes

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