Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62037018 Chenopodium quinoa HOM05D003094 ORTHO05D003482 1.6e-26 122.1 64 100.0
AUR62042498 Chenopodium quinoa HOM05D003094 ORTHO05D003482 1.4e-14 82.4 49 83.7
AUR62040348 Chenopodium quinoa HOM05D003094 ORTHO05D003482 4.0e-14 80.9 49 81.6
EL10Ac4g10181 Beta vulgaris HOM05D003094 ORTHO05D003482 2.3e-09 65.1 47 70.2
EL10Ac7g16627 Beta vulgaris HOM05D003094 ORTHO05D003482 2.3e-09 65.1 47 70.2
Sc04g0003380 Simmondsia chinensis HOM05D003094 ORTHO05D003482 2.3e-09 65.1 47 68.1
Atru.chr9.905 Acer truncatum HOM05D003094 ORTHO05D003482 5.0e-09 63.9 47 66.0
TAR374G0309 Trochodendron aralioides HOM05D003094 ORTHO05D003482 5.0e-09 63.9 48 64.6
TAR374G0733 Trochodendron aralioides HOM05D003094 ORTHO05D003482 5.0e-09 63.9 48 64.6
SHI53281 Sapria himalayana HOM05D003094 ORTHO05D003482 6.6e-09 63.5 48 64.6
ATR0757G079 Amborella trichopoda HOM05D003094 ORTHO05D003482 8.6e-09 63.2 47 66.0
ClCG06G014600 Citrullus lanatus HOM05D003094 ORTHO05D003482 8.6e-09 63.2 47 66.0
MELO3C017325.2 Cucumis melo HOM05D003094 ORTHO05D003482 8.6e-09 63.2 47 66.0
MBI16_g44830_MAGBIO Magnolia biondii HOM05D003094 ORTHO05D003482 8.6e-09 63.2 49 61.2
CiPaw.16G089100 Carya illinoinensis HOM05D003094 ORTHO05D003482 1.1e-08 62.8 47 66.0
Lj9A424T34 Lonicera japonica HOM05D003094 ORTHO05D003482 1.9e-08 62.0 47 63.8
Ciclev10020325m.g Citrus clementina HOM05D003094 ORTHO05D003482 2.5e-08 61.6 47 63.8
GSVIVG01008338001 Vitis vinifera HOM05D003094 ORTHO05D003482 2.5e-08 61.6 47 61.7
CSS0029576 Camellia sinensis var. sinensis HOM05D003094 ORTHO05D003482 9.5e-08 59.7 47 61.7
Hund11930 Selenicereus undatus HOM05D003094 ORTHO05D003482 9.5e-08 59.7 47 59.6
Haze_18734 Corylus avellana HOM05D003094 ORTHO05D003482 1.2e-07 59.3 47 61.7
Eucgr.K02236 Eucalyptus grandis HOM05D003094 ORTHO05D003482 1.2e-07 59.3 47 61.7
MD06G1220500 Malus domestica HOM05D003094 ORTHO05D003482 1.6e-07 58.9 47 59.6
MD14G1229900 Malus domestica HOM05D003094 ORTHO05D003482 2.1e-07 58.5 47 59.6
Sed0020442 Sechium edule HOM05D003094 ORTHO05D003482 2.1e-07 58.5 47 61.7
Cc04_g06860 Coffea canephora HOM05D003094 ORTHO05D003482 2.8e-07 58.2 47 59.6
Glyma.05G139400 Glycine max HOM05D003094 ORTHO05D003482 2.8e-07 58.2 47 59.6
Cfa019732 Carpinus fangiana HOM05D003094 ORTHO05D003482 3.6e-07 57.8 47 59.6
Duzib213G0897 Durio zibethinus HOM05D003094 ORTHO05D003482 3.6e-07 57.8 47 59.6
Thecc.07G091700 Theobroma cacao HOM05D003094 ORTHO05D003482 3.6e-07 57.8 47 57.4
Lj4g0013095 Lotus japonicus HOM05D003094 ORTHO05D003482 4.7e-07 57.4 49 57.1
QL10p026547 Quercus lobata HOM05D003094 ORTHO05D003482 4.7e-07 57.4 47 57.4
Gohir.A13G146300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 6.2e-07 57.0 47 61.7
Gohir.D09G047900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 6.2e-07 57.0 47 61.7
Gohir.D13G151300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 6.2e-07 57.0 47 61.7
Gohir.D13G152004 Gossypium hirsutum HOM05D003094 ORTHO05D003482 6.2e-07 57.0 47 61.7
Gorai.012G098500 Gossypium raimondii HOM05D000575 ORTHO05D003482 6.2e-07 57.0 47 61.7
Actinidia19943 Actinidia chinensis HOM05D003094 ORTHO05D003482 8.1e-07 56.6 46 58.7
Actinidia36579 Actinidia chinensis HOM05D003094 ORTHO05D003482 8.1e-07 56.6 46 58.7
Manes.05G133000 Manihot esculenta HOM05D003094 ORTHO05D003482 8.1e-07 56.6 47 59.6
Sc10g0009380 Simmondsia chinensis HOM05D003094 ORTHO05D003482 8.1e-07 56.6 36 75.0
CsaV3_1G004020 Cucumis sativus L. HOM05D003094 ORTHO05D003482 1.1e-06 56.2 47 59.6
Dinv12225 Davidia involucrata HOM05D003094 ORTHO05D003482 1.1e-06 56.2 47 57.4
Rhsim12G0141600 Rhododendron simsii HOM05D003094 ORTHO05D003482 1.1e-06 56.2 45 57.8
CDE11G0955 Ceratophyllum demersum HOM05D003094 ORTHO05D003482 1.4e-06 55.8 46 58.7
Glyma.08G094700 Glycine max HOM05D003094 ORTHO05D003482 1.4e-06 55.8 47 57.4
Peaxi162Scf00683g00159 Petunia axillaris HOM05D003094 ORTHO05D003482 1.4e-06 55.8 48 58.3
vmacro07219 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 1.4e-06 55.8 47 57.4
FAN02G1016 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.8e-06 55.5 48 54.2
Gohir.D10G153150 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.8e-06 55.5 47 59.6
Psat7g083520 Pisum sativum HOM05D003094 ORTHO05D003482 1.8e-06 55.5 49 51.0
Dinv07353 Davidia involucrata HOM05D003094 ORTHO05D003482 2.3e-06 55.1 47 53.2
Dinv09627 Davidia involucrata HOM05D003094 ORTHO05D003482 2.3e-06 55.1 47 53.2
FAN05G2182 Fragaria x ananassa HOM05D003094 ORTHO05D003482 2.3e-06 55.1 48 54.2
Gohir.A02G112001 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.3e-06 55.1 47 59.6
Gohir.A13G146900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.3e-06 55.1 47 59.6
Gohir.D08G096900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.3e-06 55.1 47 59.6
Gorai.013G170500 Gossypium raimondii HOM05D003094 ORTHO05D003482 2.3e-06 55.1 47 59.6
vmacro16434 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 2.3e-06 55.1 45 55.6
VMungo0251G1973 Vigna mungo HOM05D003094 ORTHO05D003482 2.3e-06 55.1 49 53.1
Gorai.003G056600 Gossypium raimondii HOM05D003094 ORTHO05D003482 3.1e-06 54.7 47 59.6
Phvul.002G182800 Phaseolus vulgaris HOM05D003094 ORTHO05D003482 3.1e-06 54.7 46 56.5
Rhsim10G0183200 Rhododendron simsii HOM05D003094 ORTHO05D003482 3.1e-06 54.7 47 55.3
FvH4_6g26830 Fragaria vesca HOM05D003094 ORTHO05D003482 4.0e-06 54.3 48 52.1
FAN14G2495 Fragaria x ananassa HOM05D003094 ORTHO05D003482 4.0e-06 54.3 48 52.1
Gorai.001G159100 Gossypium raimondii HOM05D003094 ORTHO05D003482 4.0e-06 54.3 47 57.4
Solyc03g119170.3 Solanum lycopersicum HOM05D003094 ORTHO05D003482 4.0e-06 54.3 47 57.4
Sopen03g038060 Solanum pennellii HOM05D003094 ORTHO05D003482 4.0e-06 54.3 47 57.4
PGSC0003DMG402005733 Solanum tuberosum HOM05D003094 ORTHO05D003482 4.0e-06 54.3 47 57.4
CANSAT80G1577 Cannabis sativa HOM05D003094 ORTHO05D003482 5.2e-06 53.9 47 55.3
TWI60G1358 Tripterygium wilfordii HOM05D003094 ORTHO05D003482 5.2e-06 53.9 47 55.3
Duzib084G0458 Durio zibethinus HOM05D003094 ORTHO05D003482 6.8e-06 53.5 49 53.1
Gohir.D07G182700 Gossypium hirsutum HOM05D003094 ORTHO05D003482 6.8e-06 53.5 47 59.6
Nitab4.5_0001986g0070 Nicotiana tabacum HOM05D003094 ORTHO05D003482 6.8e-06 53.5 47 57.4
Nitab4.5_0004955g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 6.8e-06 53.5 47 57.4
PSO017G6706 Papaver somniferum HOM05D003094 ORTHO05D003482 6.8e-06 53.5 49 55.1
PSO063G0897 Papaver somniferum HOM05D003094 ORTHO05D003482 6.8e-06 53.5 49 55.1
RcHm_v2.0_Chr2g0128201 Rosa chinensis HOM05D003094 ORTHO05D003482 6.8e-06 53.5 47 53.2
TPR.G5116 Trifolium pratense HOM05D003094 ORTHO05D003482 6.8e-06 53.5 45 55.6


User provided reference genes

Program Settings