Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62036888 Chenopodium quinoa HOM05D008020 ORTHO05D010140 3.2e-30 134.4 67 100.0
AUR62043558 Chenopodium quinoa HOM05D008020 ORTHO05D010140 3.2e-30 134.4 67 100.0
EL10Ac1g01981 Beta vulgaris HOM05D008020 ORTHO05D010140 3.5e-21 104.4 68 82.4
Sc26g0004630 Simmondsia chinensis HOM05D008020 ORTHO05D010140 6.9e-17 90.1 68 70.6
Ah.00g000390 Amaranthus hybridus HOM05D008020 ORTHO05D010140 4.9e-15 84.0 68 70.6
SalBow7G2452 Salvia bowleyana HOM05D008020 ORTHO05D010140 1.4e-14 82.4 68 66.2
Glyma.04G018700 Glycine max HOM05D008020 ORTHO05D010140 7.1e-14 80.1 69 63.8
Manes.05G135100 Manihot esculenta HOM05D008020 ORTHO05D010140 9.3e-14 79.7 70 67.1
Oeu056212.1 Olea europaea HOM05D008020 ORTHO05D010140 1.2e-13 79.3 69 63.8
Rhsim06G0008300 Rhododendron simsii HOM05D008020 ORTHO05D010140 1.2e-13 79.3 70 67.1
Psat5g011800 Pisum sativum HOM05D008020 ORTHO05D010140 2.7e-13 78.2 70 62.9
Glyma.06G019000 Glycine max HOM05D008020 ORTHO05D010140 3.5e-13 77.8 69 62.3
Ca_15441_v3 Cicer arietinum L. HOM05D008020 ORTHO05D010140 4.6e-13 77.4 69 59.4
Os03g0133100 Oryza sativa ssp. japonica HOM05D008020 ORTHO05D010140 6.0e-13 77.0 68 69.1
Medtr3g115170 Medicago truncatula HOM05D008020 ORTHO05D010140 1.0e-12 76.3 69 60.9
Thecc.08G057500 Theobroma cacao HOM05D008020 ORTHO05D010140 1.0e-12 76.3 70 60.0
Haze_22756 Corylus avellana HOM05D008020 ORTHO05D010140 1.8e-12 75.5 69 62.3
Gorai.002G118600 Gossypium raimondii HOM05D008020 ORTHO05D010140 1.8e-12 75.5 70 62.9
Gohir.A01G106700 Gossypium hirsutum HOM05D008020 ORTHO05D010140 2.3e-12 75.1 69 60.9
Zm00001eb402590 Zea mays HOM05D008020 ORTHO05D010140 2.3e-12 75.1 72 63.9
arahy.Tifrunner.gnm1.ann1.IQ4KFY Arachis hypogaea HOM05D008020 ORTHO05D010140 3.0e-12 74.7 74 55.4
Cfa014061 Carpinus fangiana HOM05D008020 ORTHO05D010140 3.0e-12 74.7 69 62.3
Gohir.D01G093200 Gossypium hirsutum HOM05D008020 ORTHO05D010140 3.0e-12 74.7 69 60.9
Phvul.009G021900 Phaseolus vulgaris HOM05D008020 ORTHO05D010140 3.0e-12 74.7 69 59.4
Migut.C00948 Erythranthe guttata HOM05D008020 ORTHO05D010140 3.9e-12 74.3 71 64.8
Migut.C00952 Erythranthe guttata HOM05D008020 ORTHO05D010140 3.9e-12 74.3 71 64.8
Nn6g31749 Nelumbo nucifera HOM05D008020 ORTHO05D010140 6.7e-12 73.6 68 60.3
CDE05G0785 Ceratophyllum demersum HOM05D008020 ORTHO05D010140 1.1e-11 72.8 69 62.3
Lj1g0023017 Lotus japonicus HOM05D008020 ORTHO05D010140 1.1e-11 72.8 69 58.0
VMungo1309G2936 Vigna mungo HOM05D008020 ORTHO05D010140 1.1e-11 72.8 68 58.8
ClCG11G018630 Citrullus lanatus HOM05D008020 ORTHO05D010140 1.5e-11 72.4 69 60.9
TWI56G1414 Tripterygium wilfordii HOM05D008020 ORTHO05D010140 2.5e-11 71.6 70 62.9
Eucgr.F03547 Eucalyptus grandis HOM05D008020 ORTHO05D010140 3.3e-11 71.2 72 61.1
PSO210G7351 Papaver somniferum HOM05D008020 ORTHO05D010140 3.3e-11 71.2 71 57.7
Cpa.g.sc26.209 Carica papaya HOM05D008020 ORTHO05D010140 4.3e-11 70.9 70 58.6
MD15G1003000 Malus domestica HOM05D008020 ORTHO05D010140 4.3e-11 70.9 70 58.6
Actinidia29785 Actinidia chinensis HOM05D008020 ORTHO05D010140 5.6e-11 70.5 68 60.3
Carub.0008s0691 Capsella rubella HOM05D008020 ORTHO05D010140 1.3e-10 69.3 76 52.6
COL.COLO4_00185 Corchorus olitorius HOM05D008020 ORTHO05D010140 1.3e-10 69.3 72 58.3
COL.COLO4_03997 Corchorus olitorius HOM05D008020 ORTHO05D010140 1.3e-10 69.3 72 58.3
TAR625G0930 Trochodendron aralioides HOM05D008020 ORTHO05D010140 1.3e-10 69.3 69 60.9
ATR0106G002 Amborella trichopoda HOM05D008020 ORTHO05D010140 2.1e-10 68.6 73 56.2
unitig_0.g2104 Utricularia gibba HOM05D008020 ORTHO05D010140 3.7e-10 67.8 69 62.3
Sp7g08310 Schrenkiella parvula HOM05D008020 ORTHO05D010140 4.8e-10 67.4 85 47.1
Lalb_Chr11g0061691 Lupinus albus HOM05D008020 ORTHO05D010140 6.2e-10 67.0 71 56.3
Thhalv10009649m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 8.2e-10 66.6 85 47.1
AT5G42290 Arabidopsis thaliana HOM05D008020 ORTHO05D010140 1.1e-09 66.2 83 48.2
C03p28110 Brassica napus HOM05D008020 ORTHO05D010140 1.1e-09 66.2 85 47.1
MELO3C017014.2 Cucumis melo HOM05D008020 ORTHO05D010140 1.1e-09 66.2 71 56.3
BcaC01g05309 Brassica carinata HOM05D008020 ORTHO05D010140 1.8e-09 65.5 85 45.9
RcHm_v2.0_Chr6g0304161 Rosa chinensis HOM05D008020 ORTHO05D010140 1.8e-09 65.5 75 58.7
BolC3t15181H Brassica oleracea HOM05D008020 ORTHO05D010140 2.4e-09 65.1 85 43.5
Lsat_1_v5_gn_9_44980 Lactuca sativa HOM05D008020 ORTHO05D010140 2.4e-09 65.1 70 54.3
ECA232G3495 Erigeron canadensis HOM05D008020 ORTHO05D010140 3.1e-09 64.7 77 51.9
HanXRQChr15g0492771 Helianthus annuus HOM05D008020 ORTHO05D010140 3.1e-09 64.7 71 54.9
BcaB01g03440 Brassica carinata HOM05D008020 ORTHO05D010140 4.0e-09 64.3 85 44.7
Thhalv10028031m.g Eutrema salsugineum HOM05D008020 ORTHO05D010140 4.0e-09 64.3 85 49.4
CARHR284890 Cardamine hirsuta HOM05D008020 ORTHO05D010140 6.9e-09 63.5 84 45.2
Duzib041G0109 Durio zibethinus HOM05D008020 ORTHO05D010140 6.9e-09 63.5 69 53.6
AL8G19330 Arabidopsis lyrata HOM05D008020 ORTHO05D010140 9.0e-09 63.2 83 47.0
SEGI_30631 Sequoiadendron giganteum HOM05D008020 ORTHO05D010140 1.2e-08 62.8 75 52.0
CSS0004036 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 2.0e-08 62.0 68 57.4
CsaV3_4G037160 Cucumis sativus L. HOM05D008020 ORTHO05D010140 7.6e-08 60.1 67 52.2
FAN15G1770 Fragaria x ananassa HOM05D008020 ORTHO05D010140 2.9e-07 58.2 82 50.0
FvH4_2g37570 Fragaria vesca HOM05D008020 ORTHO05D010140 1.1e-06 56.2 83 48.2
AagrBONN_evm.TU.Sc2ySwM_368.1603 Anthoceros agrestis HOM05D008020 ORTHO05D010140 1.4e-06 55.8 68 51.5
CSS0008844 Camellia sinensis var. sinensis HOM05D008020 ORTHO05D010140 1.4e-06 55.8 66 51.5


User provided reference genes

Program Settings