Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62036841 Chenopodium quinoa HOM05D007171 ORTHO05D008946 4.3e-124 448.0 224 100.0
AUR62042289 Chenopodium quinoa HOM05D007171 ORTHO05D008946 2.1e-118 429.1 224 95.5
EL10Ac7g17274 Beta vulgaris HOM05D007171 ORTHO05D008946 6.1e-86 321.2 233 70.0
CiPaw.10G139300 Carya illinoinensis HOM05D007171 ORTHO05D008946 1.0e-56 224.2 208 52.4
Hma1.2p1_0350F.1_g132480 Hydrangea macrophylla HOM05D007171 ORTHO05D008946 1.3e-56 223.8 218 52.3
CSS0013206 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 2.3e-56 223.0 208 53.4
CSS0034218 Camellia sinensis var. sinensis HOM05D007171 ORTHO05D008946 2.3e-56 223.0 208 53.4
QL07p045896 Quercus lobata HOM05D007171 ORTHO05D008946 6.2e-54 214.9 202 52.5
Dinv37232 Davidia involucrata HOM05D007171 ORTHO05D008946 1.4e-53 213.8 208 51.9
Nn2g10565 Nelumbo nucifera HOM05D007171 ORTHO05D008946 1.2e-52 210.7 215 50.2
Cfa017468 Carpinus fangiana HOM05D007171 ORTHO05D008946 8.4e-51 204.5 203 48.3
Lalb_Chr21g0317461 Lupinus albus HOM05D007171 ORTHO05D008946 8.4e-51 204.5 196 50.5
Sed0019751 Sechium edule HOM05D007171 ORTHO05D008946 1.1e-50 204.1 216 49.5
MELO3C003081.2 Cucumis melo HOM05D007171 ORTHO05D008946 2.4e-50 203.0 213 49.3
Lj2C103T12 Lonicera japonica HOM05D007171 ORTHO05D008946 4.2e-50 202.2 206 49.0
ATR0594G074 Amborella trichopoda HOM05D007171 ORTHO05D008946 1.6e-49 200.3 182 53.3
Eucgr.K03186 Eucalyptus grandis HOM05D007171 ORTHO05D008946 1.6e-49 200.3 205 47.8
Gohir.A13G095390 Gossypium hirsutum HOM05D007171 ORTHO05D008946 2.7e-49 199.5 227 46.7
Ciclev10012666m.g Citrus clementina HOM05D007171 ORTHO05D008946 6.0e-49 198.4 207 49.3
Actinidia11236 Actinidia chinensis HOM05D007171 ORTHO05D008946 1.0e-48 197.6 216 44.0
MD04G1110400 Malus domestica HOM05D007171 ORTHO05D008946 1.0e-48 197.6 228 45.6
GSVIVG01025575001 Vitis vinifera HOM05D007171 ORTHO05D008946 1.3e-48 197.2 216 49.1
Ca_04434_v3 Cicer arietinum L. HOM05D007171 ORTHO05D008946 1.7e-48 196.8 197 48.7
Gorai.001G248800 Gossypium raimondii HOM05D007171 ORTHO05D008946 2.3e-48 196.4 227 45.8
Gohir.D13G097200 Gossypium hirsutum HOM05D007171 ORTHO05D008946 5.1e-48 195.3 227 45.8
MSTRG.10286 Avicennia marina HOM05D007171 ORTHO05D008946 6.6e-48 194.9 196 50.0
Prupe.6G245500 Prunus persica HOM05D007171 ORTHO05D008946 8.7e-48 194.5 177 53.7
Thecc.05G049600 Theobroma cacao HOM05D007171 ORTHO05D008946 1.5e-47 193.7 229 44.5
arahy.Tifrunner.gnm1.ann1.J666ZG Arachis hypogaea HOM05D007171 ORTHO05D008946 2.5e-47 193.0 202 47.5
RcHm_v2.0_Chr3g0468061 Rosa chinensis HOM05D007171 ORTHO05D008946 2.5e-47 193.0 223 47.1
arahy.Tifrunner.gnm1.ann1.56UX32 Arachis hypogaea HOM05D007171 ORTHO05D008946 3.3e-47 192.6 202 47.5
Migut.L01644 Erythranthe guttata HOM05D007171 ORTHO05D008946 4.3e-47 192.2 222 46.8
PGR004G1538 Punica granatum HOM05D007171 ORTHO05D008946 5.6e-47 191.8 222 44.6
Cc06_g03280 Coffea canephora HOM05D007171 ORTHO05D008946 1.3e-46 190.7 196 46.9
Atru.chr8.2508 Acer truncatum HOM05D007171 ORTHO05D008946 8.1e-46 188.0 208 49.0
HanXRQChr13g0399321 Helianthus annuus HOM05D007171 ORTHO05D008946 1.4e-45 187.2 196 49.0
Lj2g0011641 Lotus japonicus HOM05D007171 ORTHO05D008946 1.4e-45 187.2 201 47.8
VMungo0464G1509 Vigna mungo HOM05D007171 ORTHO05D008946 1.4e-45 187.2 198 49.5
Peaxi162Scf00039g00419 Petunia axillaris HOM05D007171 ORTHO05D008946 1.8e-45 186.8 199 46.2
Sc07g0006190 Simmondsia chinensis HOM05D007171 ORTHO05D008946 2.4e-45 186.4 208 51.9
Medtr6g023885 Medicago truncatula HOM05D007171 ORTHO05D008946 3.1e-45 186.0 223 43.0
TWI74G0166 Tripterygium wilfordii HOM05D007171 ORTHO05D008946 4.0e-45 185.7 223 44.4
Manes.09G071900 Manihot esculenta HOM05D007171 ORTHO05D008946 9.0e-45 184.5 200 46.0
CANSAT80G0026 Cannabis sativa HOM05D007171 ORTHO05D008946 4.4e-44 182.2 202 48.0
Phvul.004G054300 Phaseolus vulgaris HOM05D007171 ORTHO05D008946 5.8e-44 181.8 191 46.6
FvH4_6g14830 Fragaria vesca HOM05D007171 ORTHO05D008946 2.2e-43 179.9 222 45.0
CsaV3_4G024490 Cucumis sativus L. HOM05D007171 ORTHO05D008946 1.1e-42 177.6 213 43.7
FAN14G2678 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.9e-42 176.8 222 44.6
SHI12609 Sapria himalayana HOM05D007171 ORTHO05D008946 1.9e-42 176.8 185 46.5
ECA233G5714 Erigeron canadensis HOM05D007171 ORTHO05D008946 4.2e-42 175.6 186 48.4
SalBow4G3339 Salvia bowleyana HOM05D007171 ORTHO05D008946 4.2e-42 175.6 196 44.9
Sopen09g001790 Solanum pennellii HOM05D007171 ORTHO05D008946 7.1e-42 174.9 197 43.7
FAN05G0875 Fragaria x ananassa HOM05D007171 ORTHO05D008946 9.3e-42 174.5 214 45.3
FAN09G2349 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.2e-41 174.1 222 43.2
Glyma.05G078000 Glycine max HOM05D007171 ORTHO05D008946 1.6e-41 173.7 204 45.6
Nitab4.5_0002774g0040 Nicotiana tabacum HOM05D007171 ORTHO05D008946 2.1e-41 173.3 197 44.2
Nitab4.5_0000643g0130 Nicotiana tabacum HOM05D007171 ORTHO05D008946 3.5e-41 172.6 199 44.2
TPR.G16189 Trifolium pratense HOM05D007171 ORTHO05D008946 4.6e-41 172.2 196 44.9
Solyc09g005930.4 Solanum lycopersicum HOM05D007171 ORTHO05D008946 6.0e-41 171.8 197 43.7
Glyma.19G071700 Glycine max HOM05D007171 ORTHO05D008946 1.0e-40 171.0 199 44.2
CDE04G2331 Ceratophyllum demersum HOM05D007171 ORTHO05D008946 5.1e-40 168.7 210 43.8
MBI14_g46135_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 5.1e-40 168.7 314 36.0
Haze_20689 Corylus avellana HOM05D007171 ORTHO05D008946 6.6e-40 168.3 191 44.5
THA.LOC104826994 Tarenaya hassleriana HOM05D007171 ORTHO05D008946 8.7e-40 167.9 201 43.8
FAN02G0958 Fragaria x ananassa HOM05D007171 ORTHO05D008946 1.9e-39 166.8 222 43.2
PSO339G0903 Papaver somniferum HOM05D007171 ORTHO05D008946 2.5e-39 166.4 175 47.4
PGSC0003DMG400023935 Solanum tuberosum HOM05D007171 ORTHO05D008946 2.5e-39 166.4 197 41.6
Duzib128G0424 Durio zibethinus HOM05D007171 ORTHO05D008946 5.6e-39 165.2 229 41.9
Lsat_1_v5_gn_6_33220 Lactuca sativa HOM05D007171 ORTHO05D008946 5.6e-39 165.2 186 46.8
BolC9t60129H Brassica oleracea HOM05D007171 ORTHO05D008946 9.6e-39 164.5 212 41.5
Thhalv10014568m.g Eutrema salsugineum HOM05D007171 ORTHO05D008946 1.3e-38 164.1 210 41.4
BcaC06g32009 Brassica carinata HOM05D007171 ORTHO05D008946 2.8e-38 162.9 215 40.9
A10p32970 Brassica napus HOM05D007171 ORTHO05D008946 6.2e-38 161.8 211 40.3
BcaNung03278 Brassica carinata HOM05D007171 ORTHO05D008946 8.1e-38 161.4 211 41.2
DCAR_017747 Daucus carota HOM05D007171 ORTHO05D008946 1.4e-37 160.6 202 41.1
BraA10t45334Z Brassica rapa HOM05D007171 ORTHO05D008946 1.8e-37 160.2 211 40.3
PSO384G3756 Papaver somniferum HOM05D007171 ORTHO05D008946 1.8e-37 160.2 175 45.7
Aa31LG1G22150 Aethionema arabicum HOM05D007171 ORTHO05D008946 4.0e-37 159.1 192 43.8
Carub.0006s0150 Capsella rubella HOM05D007171 ORTHO05D008946 6.9e-37 158.3 202 42.6
unitig_0.g696 Utricularia gibba HOM05D007171 ORTHO05D008946 6.9e-37 158.3 179 45.8
CAN.G350.19 Capsicum annuum HOM05D007171 ORTHO05D008946 1.2e-36 157.5 192 42.2
C09p73940 Brassica napus HOM05D007171 ORTHO05D008946 1.5e-36 157.1 212 40.6
AT5G02740 Arabidopsis thaliana HOM05D007171 ORTHO05D008946 4.5e-36 155.6 203 42.9
SGA_v2.0_scaffold94G28650 Striga asiatica HOM05D007171 ORTHO05D008946 1.7e-35 153.7 187 39.6
Zm00001eb397290 Zea mays HOM05D007171 ORTHO05D008946 8.4e-35 151.4 176 42.0
AL6G11990 Arabidopsis lyrata HOM05D007171 ORTHO05D008946 1.2e-33 147.5 203 40.4
SEGI_11390 Sequoiadendron giganteum HOM05D007171 ORTHO05D008946 1.2e-33 147.5 184 42.4
Potri.006G215800 Populus trichocarpa HOM05D007171 ORTHO05D008946 5.1e-32 142.1 250 40.0
Os03g0282900 Oryza sativa ssp. japonica HOM05D007171 ORTHO05D008946 1.5e-31 140.6 236 35.6
Sabra06G0166400 Salix brachista HOM05D007171 ORTHO05D008946 5.6e-31 138.7 220 40.5
Ah.08g212060 Amaranthus hybridus HOM05D007171 ORTHO05D008946 2.6e-28 129.8 188 42.0
vmacro20092 Vaccinium macrocarpon HOM05D007171 ORTHO05D008946 1.9e-26 123.6 140 47.1
Ah.08g212070 Amaranthus hybridus HOM05D007171 ORTHO05D008946 3.9e-24 115.9 87 65.5
COL.COLO4_10310 Corchorus olitorius HOM05D007171 ORTHO05D008946 3.9e-24 115.9 206 36.4
Psat1g085840 Pisum sativum HOM05D007171 ORTHO05D008946 1.6e-22 110.5 117 44.4
HPP92_001690 Vanilla planifolia HOM05D007171 ORTHO05D008946 3.4e-20 102.8 123 39.0
Oeu035685.1 Olea europaea HOM05D007171 ORTHO05D008946 8.5e-19 98.2 85 48.2
CARHR210640 Cardamine hirsuta HOM05D007171 ORTHO05D008946 4.6e-17 92.4 135 39.3
Aqoxy2G01927 Aquilegia oxysepala HOM05D007171 ORTHO05D008946 1.0e-16 91.3 146 39.0
TAR383G0190 Trochodendron aralioides HOM05D007171 ORTHO05D008946 3.9e-16 89.4 95 44.2
ClCG04G008670 Citrullus lanatus HOM05D007171 ORTHO05D008946 5.7e-15 85.5 168 34.5
SMO358G0627 Selaginella moellendorffii HOM05D007171 ORTHO05D008946 1.6e-14 84.0 203 29.1
Pp3c16_16690 Physcomitrium patens HOM05D007171 ORTHO05D008946 3.7e-14 82.8 201 28.9
MBI14_g16337_MAGBIO Magnolia biondii HOM05D007171 ORTHO05D008946 2.4e-13 80.1 56 62.5
AagrBONN_evm.TU.Sc2ySwM_117.1072 Anthoceros agrestis HOM05D007171 ORTHO05D008946 1.0e-11 74.7 177 27.1
HanXRQChr13g0399281 Helianthus annuus HOM05D007171 ORTHO05D008946 2.5e-10 70.1 72 48.6
CBR_g5643 Chara braunii HOM05D062952 ORTHO05D008946 3.9e-08 62.8 171 24.6


User provided reference genes

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