Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62036679 Chenopodium quinoa HOM05D005668 ORTHO05D007082 3.7e-114 414.8 204 100.0
AUR62034588 Chenopodium quinoa HOM05D005668 ORTHO05D007082 8.0e-101 370.5 187 97.3
EL10Ac7g17156 Beta vulgaris HOM05D005668 ORTHO05D007082 8.6e-95 350.5 187 89.8
Ah.02g128040 Amaranthus hybridus HOM05D004972 ORTHO05D006309 1.5e-91 339.7 186 88.7
Hund26016 Selenicereus undatus HOM05D005668 ORTHO05D007082 3.9e-87 325.1 183 82.5
Sc01g0004980 Simmondsia chinensis HOM05D005668 ORTHO05D007082 9.6e-78 293.9 186 76.3
Hma1.2p1_0671F.1_g200690 Hydrangea macrophylla HOM05D005668 ORTHO05D007082 1.7e-74 283.1 180 72.2
GSVIVG01034046001 Vitis vinifera HOM05D005668 ORTHO05D007082 2.2e-74 282.7 184 71.7
Lj3P959T33 Lonicera japonica HOM05D005668 ORTHO05D007082 1.4e-73 280.0 183 69.9
Thecc.05G026500 Theobroma cacao HOM05D005668 ORTHO05D007082 1.4e-73 280.0 182 70.3
Cpa.g.sc56.75 Carica papaya HOM05D005668 ORTHO05D007082 3.2e-73 278.9 194 67.5
Potri.016G105600 Populus trichocarpa HOM05D005668 ORTHO05D007082 4.2e-73 278.5 184 69.0
CSS0033766 Camellia sinensis var. sinensis HOM05D005668 ORTHO05D007082 5.4e-73 278.1 183 71.6
Actinidia13809 Actinidia chinensis HOM05D005668 ORTHO05D007082 7.1e-73 277.7 182 69.2
Nn2g13550 Nelumbo nucifera HOM05D005668 ORTHO05D007082 7.1e-73 277.7 182 68.7
Migut.J00254 Erythranthe guttata HOM05D005668 ORTHO05D007082 9.3e-73 277.3 179 72.1
Manes.09G099500 Manihot esculenta HOM05D005668 ORTHO05D007082 9.3e-73 277.3 184 67.9
TAR633G1417 Trochodendron aralioides HOM05D005668 ORTHO05D007082 9.3e-73 277.3 178 70.8
COL.COLO4_14664 Corchorus olitorius HOM05D005668 ORTHO05D007082 2.7e-72 275.8 182 69.8
Peaxi162Scf00014g01419 Petunia axillaris HOM05D005668 ORTHO05D007082 2.7e-72 275.8 181 66.9
MSTRG.5615 Avicennia marina HOM05D005668 ORTHO05D007082 6.0e-72 274.6 178 70.2
PGSC0003DMG400019135 Solanum tuberosum HOM05D005668 ORTHO05D007082 6.0e-72 274.6 182 68.1
CAN.G978.9 Capsicum annuum HOM05D005668 ORTHO05D007082 3.0e-71 272.3 178 68.5
CANSAT35G1374 Cannabis sativa HOM05D005668 ORTHO05D007082 3.9e-71 271.9 182 67.6
Cc06_g01940 Coffea canephora HOM05D005668 ORTHO05D007082 5.1e-71 271.6 178 69.1
Solyc09g011730.4 Solanum lycopersicum HOM05D005668 ORTHO05D007082 5.1e-71 271.6 178 69.7
Sopen09g006550 Solanum pennellii HOM05D005668 ORTHO05D007082 5.1e-71 271.6 178 69.7
Duzib093G0236 Durio zibethinus HOM05D005668 ORTHO05D007082 6.6e-71 271.2 179 67.0
PSO384G2457 Papaver somniferum HOM05D005668 ORTHO05D007082 6.6e-71 271.2 183 66.7
PSO339G5656 Papaver somniferum HOM05D005668 ORTHO05D007082 8.7e-71 270.8 187 65.8
Actinidia29156 Actinidia chinensis HOM05D005668 ORTHO05D007082 1.5e-70 270.0 178 69.1
Ciclev10012485m.g Citrus clementina HOM05D005668 ORTHO05D007082 1.5e-70 270.0 185 67.0
Haze_20910 Corylus avellana HOM05D005668 ORTHO05D007082 1.5e-70 270.0 184 67.9
QL07p027771 Quercus lobata HOM05D005668 ORTHO05D007082 1.5e-70 270.0 184 65.2
PGSC0003DMG400020340 Solanum tuberosum HOM05D005668 ORTHO05D007082 3.3e-70 268.9 178 68.5
Potri.006G093700 Populus trichocarpa HOM05D005668 ORTHO05D007082 4.3e-70 268.5 191 64.4
Nitab4.5_0000119g0350 Nicotiana tabacum HOM05D005668 ORTHO05D007082 5.6e-70 268.1 182 65.9
Sabra06G0071200 Salix brachista HOM05D005668 ORTHO05D007082 9.6e-70 267.3 190 64.7
CAN.G351.19 Capsicum annuum HOM05D005668 ORTHO05D007082 1.6e-69 266.5 182 65.9
unitig_27.g24805 Utricularia gibba HOM05D005668 ORTHO05D007082 3.6e-69 265.4 183 67.2
CiPaw.10G150900 Carya illinoinensis HOM05D005668 ORTHO05D007082 8.1e-69 264.2 204 60.3
RcHm_v2.0_Chr3g0464311 Rosa chinensis HOM05D005668 ORTHO05D007082 8.1e-69 264.2 184 66.8
FAN09G2081 Fragaria x ananassa HOM05D005668 ORTHO05D007082 1.1e-68 263.8 184 66.3
Gohir.A09G162000 Gossypium hirsutum HOM05D005668 ORTHO05D007082 2.4e-68 262.7 179 67.0
Gohir.D09G157600 Gossypium hirsutum HOM05D005668 ORTHO05D007082 3.1e-68 262.3 179 66.5
Gorai.006G179300 Gossypium raimondii HOM05D005668 ORTHO05D007082 3.1e-68 262.3 179 66.5
Atru.chr8.2154 Acer truncatum HOM05D005668 ORTHO05D007082 4.0e-68 261.9 183 66.7
CiPaw.09G203400 Carya illinoinensis HOM05D005668 ORTHO05D007082 9.0e-68 260.8 184 64.1
Rhsim05G0201000 Rhododendron simsii HOM05D005668 ORTHO05D007082 2.0e-67 259.6 182 67.0
FvH4_6g12490 Fragaria vesca HOM05D005668 ORTHO05D007082 2.6e-67 259.2 184 65.8
FAN02G1041 Fragaria x ananassa HOM05D005668 ORTHO05D007082 2.6e-67 259.2 184 65.8
FAN05G5175 Fragaria x ananassa HOM05D005668 ORTHO05D007082 2.6e-67 259.2 184 66.3
Lsat_1_v5_gn_9_29260 Lactuca sativa HOM05D005668 ORTHO05D007082 3.4e-67 258.8 180 63.9
HanXRQChr10g0292601 Helianthus annuus HOM05D005668 ORTHO05D007082 4.4e-67 258.5 182 64.8
TWI77G0370 Tripterygium wilfordii HOM05D005668 ORTHO05D007082 4.4e-67 258.5 202 60.4
Sed0009323 Sechium edule HOM05D005668 ORTHO05D007082 5.8e-67 258.1 187 63.6
ECA247G1252 Erigeron canadensis HOM05D005668 ORTHO05D007082 7.6e-67 257.7 180 65.6
HanXRQChr06g0176661 Helianthus annuus HOM05D005668 ORTHO05D007082 7.6e-67 257.7 180 64.4
FAN14G5852 Fragaria x ananassa HOM05D005668 ORTHO05D007082 9.9e-67 257.3 182 65.4
PGR044G0692 Punica granatum HOM05D005668 ORTHO05D007082 1.3e-66 256.9 178 65.7
AL3G20360 Arabidopsis lyrata HOM05D005668 ORTHO05D007082 3.8e-66 255.4 188 60.1
CDE04G3656 Ceratophyllum demersum HOM05D005668 ORTHO05D007082 6.4e-66 254.6 173 66.5
Carub.0003s0836 Capsella rubella HOM05D005668 ORTHO05D007082 1.1e-65 253.8 184 60.9
ClCG10G021640 Citrullus lanatus HOM05D005668 ORTHO05D007082 1.9e-65 253.1 182 63.7
CARHR083600 Cardamine hirsuta HOM05D005668 ORTHO05D007082 2.4e-65 252.7 191 60.7
Eucgr.F01481 Eucalyptus grandis HOM05D005668 ORTHO05D007082 4.2e-65 251.9 178 66.3
Sp3g07630 Schrenkiella parvula HOM05D005668 ORTHO05D007082 4.2e-65 251.9 188 60.6
MD12G1156400 Malus domestica HOM05D005668 ORTHO05D007082 5.4e-65 251.5 185 63.8
BcaC09g48013 Brassica carinata HOM05D005668 ORTHO05D007082 1.2e-64 250.4 184 61.4
DCAR_024047 Daucus carota HOM05D005668 ORTHO05D007082 1.2e-64 250.4 160 70.6
Prupe.6G267200 Prunus persica HOM05D005668 ORTHO05D007082 1.2e-64 250.4 184 64.7
AT3G09250 Arabidopsis thaliana HOM05D005668 ORTHO05D007082 1.6e-64 250.0 188 59.0
CsaV3_3G034370 Cucumis sativus L. HOM05D005668 ORTHO05D007082 1.6e-64 250.0 190 61.1
THA.LOC104823270 Tarenaya hassleriana HOM05D005668 ORTHO05D007082 1.6e-64 250.0 185 60.0
MBI14_g25115_MAGBIO Magnolia biondii HOM05D005668 ORTHO05D007082 2.1e-64 249.6 185 62.7
MD04G1141800 Malus domestica HOM05D005668 ORTHO05D007082 2.1e-64 249.6 185 63.8
SGA_v2.0_scaffold75G24983 Striga asiatica HOM05D005668 ORTHO05D007082 2.1e-64 249.6 161 68.3
MELO3C009208.2 Cucumis melo HOM05D005668 ORTHO05D007082 4.6e-64 248.4 204 59.3
Thhalv10021409m.g Eutrema salsugineum HOM05D005668 ORTHO05D007082 7.9e-64 247.7 184 59.8
BolC1t05468H Brassica oleracea HOM05D005668 ORTHO05D007082 3.9e-63 245.4 190 58.4
BraA01t04309Z Brassica rapa HOM05D005668 ORTHO05D007082 3.9e-63 245.4 190 58.9
Aqoxy5G03828 Aquilegia oxysepala HOM05D005668 ORTHO05D007082 1.1e-62 243.8 179 62.0
Aa31LG3G1740 Aethionema arabicum HOM05D005668 ORTHO05D007082 1.5e-62 243.4 181 60.2
BcaC09g48059 Brassica carinata HOM05D005668 ORTHO05D007082 4.3e-62 241.9 184 58.7
Lalb_Chr07g0193171 Lupinus albus HOM05D005668 ORTHO05D007082 6.2e-61 238.0 177 59.3
Glyma.01G107100 Glycine max HOM05D005668 ORTHO05D007082 8.1e-61 237.7 197 55.8
Ca_07382_v3 Cicer arietinum L. HOM05D005668 ORTHO05D007082 1.4e-60 236.9 200 56.0
Gohir.A10G232501 Gossypium hirsutum HOM05D005668 ORTHO05D007082 1.4e-60 236.9 175 61.7
Gohir.D10G244900 Gossypium hirsutum HOM05D005668 ORTHO05D007082 1.8e-60 236.5 175 61.7
Glyma.03G073762 Glycine max HOM05D005668 ORTHO05D007082 9.0e-60 234.2 195 57.4
Manes.07G057000 Manihot esculenta HOM05D005668 ORTHO05D007082 2.0e-59 233.0 179 58.1
arahy.Tifrunner.gnm1.ann1.WQ4JXZ Arachis hypogaea HOM05D005668 ORTHO05D007082 7.6e-59 231.1 198 54.0
Medtr4g019910 Medicago truncatula HOM05D005668 ORTHO05D007082 7.6e-59 231.1 196 54.1
arahy.Tifrunner.gnm1.ann1.J12K19 Arachis hypogaea HOM05D005668 ORTHO05D007082 1.3e-58 230.3 198 54.0
SHI12750 Sapria himalayana HOM05D005668 ORTHO05D007082 1.3e-58 230.3 177 58.2
Os02g0788500 Oryza sativa ssp. japonica HOM05D005668 ORTHO05D007082 7.1e-57 224.6 166 64.5
Dinv37103 Davidia involucrata HOM05D005668 ORTHO05D007082 9.3e-57 224.2 182 61.5
Phvul.006G070400 Phaseolus vulgaris HOM05D005668 ORTHO05D007082 1.2e-56 223.8 197 53.3
Nitab4.5_0000008g0300 Nicotiana tabacum HOM05D005668 ORTHO05D007082 4.6e-56 221.9 138 68.8
Lj3g0016116 Lotus japonicus HOM05D005668 ORTHO05D007082 1.0e-55 220.7 197 51.8
Os01g0753200 Oryza sativa ssp. japonica HOM05D005668 ORTHO05D007082 4.3e-54 215.3 163 59.5
VMungo0540G0241 Vigna mungo HOM05D005668 ORTHO05D007082 5.6e-54 214.9 186 51.1
ATR0950G003 Amborella trichopoda HOM05D005668 ORTHO05D007082 2.8e-53 212.6 196 53.1
Gorai.011G282300 Gossypium raimondii HOM05D005668 ORTHO05D007082 4.8e-53 211.8 158 62.0
HPP92_006850 Vanilla planifolia HOM05D005668 ORTHO05D007082 9.0e-52 207.6 169 56.2
HPP92_006867 Vanilla planifolia HOM05D005668 ORTHO05D007082 2.0e-51 206.5 169 55.6
Zm00001eb257420 Zea mays HOM05D005668 ORTHO05D007082 2.0e-51 206.5 159 62.3
BcaC01g04218 Brassica carinata HOM05D005668 ORTHO05D007082 7.6e-51 204.5 163 59.5
Phvul.006G070500 Phaseolus vulgaris HOM05D005668 ORTHO05D007082 3.8e-50 202.2 196 47.4
Psat7g240360 Pisum sativum HOM05D005668 ORTHO05D007082 8.4e-50 201.1 205 49.8
SEGI_35617 Sequoiadendron giganteum HOM05D005668 ORTHO05D007082 1.9e-49 199.9 174 50.0
Gohir.A10G229920 Gossypium hirsutum HOM05D005668 ORTHO05D007082 4.6e-48 195.3 158 59.5
MBI14_g45810_MAGBIO Magnolia biondii HOM05D005668 ORTHO05D007082 7.9e-48 194.5 141 63.8
Oeu039148.1 Olea europaea HOM05D005668 ORTHO05D007082 1.1e-44 184.1 102 76.5
SMO143G0113 Selaginella moellendorffii HOM05D005668 ORTHO05D007082 3.4e-43 179.1 155 56.1
vmacro20204 Vaccinium macrocarpon HOM05D005668 ORTHO05D007082 2.9e-42 176.0 102 74.5
AagrBONN_evm.TU.Sc2ySwM_228.2951 Anthoceros agrestis HOM05D005668 ORTHO05D007082 1.9e-41 173.3 153 51.0
C03p43750 Brassica napus HOM05D005668 ORTHO05D007082 9.7e-38 161.0 103 66.0
BcaB04g18542 Brassica carinata HOM05D005668 ORTHO05D007082 1.3e-37 160.6 103 65.0
Nitab4.5_0010516g0020 Nicotiana tabacum HOM05D005668 ORTHO05D007082 1.3e-29 134.0 75 72.0
Psat3g035960 Pisum sativum HOM05D005668 ORTHO05D007082 1.4e-23 114.0 103 54.4
Dinv35535 Davidia involucrata HOM05D005668 ORTHO05D007082 5.2e-23 112.1 92 62.0
Nitab4.5_0002152g0020 Nicotiana tabacum HOM05D005668 ORTHO05D007082 1.1e-22 110.9 103 51.5
Mapoly0024s0042 Marchantia polymorpha HOM05D005144 ORTHO05D006112 3.2e-17 92.8 158 34.2
AagrBONN_evm.TU.Sc2ySwM_362.2655 Anthoceros agrestis HOM05D005144 ORTHO05D006112 2.1e-16 90.1 124 38.7
TPR.G2978 Trifolium pratense HOM05D005668 ORTHO05D007082 3.6e-16 89.4 81 54.3
SMO356G0181 Selaginella moellendorffii HOM05D005144 ORTHO05D006112 3.0e-15 86.3 118 37.3
Cre08.g375950 Chlamydomonas reinhardtii HOM05D005668 ORTHO05D007082 4.0e-15 85.9 126 38.1
BraA03t12781Z Brassica rapa HOM05D005668 ORTHO05D007082 1.2e-14 84.3 76 52.6
A03p36100 Brassica napus HOM05D005668 ORTHO05D007082 1.5e-14 84.0 76 52.6
SEGI_08848 Sequoiadendron giganteum HOM05D005144 ORTHO05D006112 3.3e-14 82.8 121 36.4
SEGI_22496 Sequoiadendron giganteum HOM05D005144 ORTHO05D006112 4.4e-14 82.4 117 35.0
arahy.Tifrunner.gnm1.ann1.2N10NB Arachis hypogaea HOM05D005668 ORTHO05D007082 1.3e-13 80.9 90 47.8
Potri.003G141600 Populus trichocarpa HOM05D005144 ORTHO05D006112 6.3e-13 78.6 117 33.3
MCO04G552 Micromonas commoda HOM05D005668 ORTHO05D007082 8.2e-13 78.2 97 44.3
Atru.chr10.1066 Acer truncatum HOM05D005668 ORTHO05D007082 5.3e-12 75.5 86 55.8
CARHR125070 Cardamine hirsuta HOM05D005144 ORTHO05D006112 7.0e-12 75.1 119 31.9
Migut.E01282 Erythranthe guttata HOM05D005144 ORTHO05D006112 7.0e-12 75.1 119 29.4
Lalb_Chr09g0332261 Lupinus albus HOM05D005144 ORTHO05D006112 7.0e-12 75.1 117 32.5
Phvul.002G299800 Phaseolus vulgaris HOM05D005144 ORTHO05D006112 7.0e-12 75.1 117 32.5
arahy.Tifrunner.gnm1.ann1.11VL1S Arachis hypogaea HOM05D005144 ORTHO05D006112 9.1e-12 74.7 117 32.5
arahy.Tifrunner.gnm1.ann1.72DNA3 Arachis hypogaea HOM05D005144 ORTHO05D006112 9.1e-12 74.7 117 32.5
MSTRG.13890 Avicennia marina HOM05D005144 ORTHO05D006112 1.2e-11 74.3 159 28.3
Lsat_1_v5_gn_6_8420 Lactuca sativa HOM05D005144 ORTHO05D006112 1.2e-11 74.3 117 30.8
Lj4g0014592 Lotus japonicus HOM05D005144 ORTHO05D006112 2.0e-11 73.6 117 31.6
MBI07_g40676_MAGBIO Magnolia biondii HOM05D005144 ORTHO05D006112 2.0e-11 73.6 117 35.0
Psat7g024160 Pisum sativum HOM05D005144 ORTHO05D006112 2.0e-11 73.6 117 31.6
Ah.12g052690 Amaranthus hybridus HOM05D005144 ORTHO05D006112 3.5e-11 72.8 117 30.8
MSTRG.1800 Avicennia marina HOM05D005144 ORTHO05D006112 3.5e-11 72.8 147 26.5
CAN.G567.13 Capsicum annuum HOM05D005144 ORTHO05D006112 3.5e-11 72.8 117 30.8
Ca_17470_v3 Cicer arietinum L. HOM05D005144 ORTHO05D006112 4.5e-11 72.4 117 31.6
VMungo0251G3542 Vigna mungo HOM05D005144 ORTHO05D006112 4.5e-11 72.4 117 31.6
CSS0010562 Camellia sinensis var. sinensis HOM05D005144 ORTHO05D006112 5.9e-11 72.0 119 30.3
CSS0049427 Camellia sinensis var. sinensis HOM05D005144 ORTHO05D006112 5.9e-11 72.0 119 30.3
AUR62010862 Chenopodium quinoa HOM05D005144 ORTHO05D006112 5.9e-11 72.0 117 30.8
AUR62019860 Chenopodium quinoa HOM05D002356 ORTHO05D006112 5.9e-11 72.0 117 30.8
Thecc.03G300600 Theobroma cacao HOM05D005144 ORTHO05D006112 5.9e-11 72.0 117 30.8
TPR.G3399 Trifolium pratense HOM05D005144 ORTHO05D006112 1.0e-10 71.2 117 30.8
Medtr8g099610 Medicago truncatula HOM05D005144 ORTHO05D006112 2.2e-10 70.1 117 30.8
Hund14208 Selenicereus undatus HOM05D005144 ORTHO05D006112 8.5e-10 68.2 117 30.8
EL10Ac5g12937 Beta vulgaris HOM05D005144 ORTHO05D006112 1.1e-09 67.8 117 28.2
Carub.0007s1712 Capsella rubella HOM05D005144 ORTHO05D006112 1.1e-09 67.8 118 28.0
Lalb_Chr05g0224021 Lupinus albus HOM05D005144 ORTHO05D006112 1.9e-09 67.0 117 28.2
TPR.G339 Trifolium pratense HOM05D005668 ORTHO05D007082 1.9e-09 67.0 103 35.0
SGA_v2.0_scaffold96G29029 Striga asiatica HOM05D005144 ORTHO05D006112 2.5e-09 66.6 117 28.2
BraA03t12780Z Brassica rapa HOM05D005668 ORTHO05D007082 1.2e-08 64.3 41 68.3
SalBow1G0822 Salvia bowleyana HOM05D005144 ORTHO05D006112 1.8e-07 60.5 158 25.9
PRCOL_00006744 Prasinoderma coloniale HOM05D005668 ORTHO05D049035 4.0e-07 59.3 123 33.3


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