Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 1.2e-106 389.8 191 100.0
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 2.7e-58 229.2 138 78.3
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 1.8e-57 226.5 136 76.5
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 6.7e-57 224.6 136 77.9
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 8.7e-57 224.2 140 77.1
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 1.5e-56 223.4 137 74.5
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 1.9e-56 223.0 137 75.2
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 3.3e-56 222.2 150 72.7
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 9.6e-56 220.7 136 75.7
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 1.3e-55 220.3 136 75.7
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 1.3e-55 220.3 136 73.5
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 2.8e-55 219.2 135 77.0
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 3.7e-55 218.8 136 75.7
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 4.8e-55 218.4 136 75.7
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 1.1e-54 217.2 136 74.3
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 1.1e-54 217.2 136 72.1
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 1.4e-54 216.9 137 74.5
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.8e-54 216.5 136 75.0
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 5.3e-54 214.9 135 74.1
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 6.9e-54 214.5 141 74.5
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 9.0e-54 214.2 135 75.6
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 9.0e-54 214.2 135 75.6
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 9.0e-54 214.2 135 75.6
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 1.5e-53 213.4 141 73.8
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 1.5e-53 213.4 139 71.9
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 1.5e-53 213.4 137 73.7
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 2.0e-53 213.0 135 73.3
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 2.6e-53 212.6 136 72.1
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 2.6e-53 212.6 137 73.0
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 3.4e-53 212.2 138 72.5
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 5.8e-53 211.5 136 72.8
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 5.8e-53 211.5 136 72.1
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 5.8e-53 211.5 136 70.6
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 1.3e-52 210.3 135 71.1
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 1.3e-52 210.3 135 73.3
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 1.3e-52 210.3 135 73.3
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.3e-52 210.3 138 71.0
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.7e-52 209.9 130 76.2
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.7e-52 209.9 130 76.2
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 3.8e-52 208.8 137 69.3
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 8.4e-52 207.6 136 71.3
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.1e-51 207.2 136 70.6
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 1.1e-51 207.2 137 70.8
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 1.9e-51 206.5 145 68.3
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.2e-51 205.7 131 74.0
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 3.2e-51 205.7 137 68.6
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 4.2e-51 205.3 137 69.3
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 4.2e-51 205.3 138 70.3
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 5.5e-51 204.9 138 69.6
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 2.1e-50 203.0 136 70.6
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 2.1e-50 203.0 136 66.9
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 3.5e-50 202.2 137 70.1
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 3.5e-50 202.2 135 67.4
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 2.3e-49 199.5 138 68.8
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 3.0e-49 199.1 136 69.1
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 3.9e-49 198.7 136 69.1
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 3.9e-49 198.7 138 68.8
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 3.9e-49 198.7 139 68.3
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 5.1e-49 198.4 136 64.7
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 5.1e-49 198.4 188 51.6
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 5.1e-49 198.4 136 69.1
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 8.7e-49 197.6 136 69.9
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 1.9e-48 196.4 136 66.9
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 3.3e-48 195.7 135 66.7
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 3.3e-48 195.7 119 77.3
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 3.3e-48 195.7 135 66.7
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 4.3e-48 195.3 136 66.2
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 5.7e-48 194.9 142 65.5
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 9.6e-48 194.1 102 93.1
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 9.6e-48 194.1 138 67.4
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 1.3e-47 193.7 140 66.4
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 1.3e-47 193.7 137 65.0
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 1.3e-47 193.7 136 67.6
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 1.3e-47 193.7 138 66.7
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 1.6e-47 193.4 136 66.2
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 1.6e-47 193.4 136 65.4
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 1.6e-47 193.4 136 65.4
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 2.1e-47 193.0 119 75.6
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 2.1e-47 193.0 138 66.7
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 2.1e-47 193.0 139 66.2
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 2.1e-47 193.0 139 66.2
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 4.8e-47 191.8 136 64.7
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 8.2e-47 191.0 133 69.9
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 1.4e-46 190.3 136 65.4
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 1.8e-46 189.9 138 70.3
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 3.1e-46 189.1 108 80.6
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 5.3e-46 188.3 135 66.7
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 5.3e-46 188.3 136 65.4
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 6.9e-46 188.0 137 65.0
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 6.9e-46 188.0 138 64.5
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 9.0e-46 187.6 123 69.9
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 9.0e-46 187.6 137 66.4
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 1.5e-45 186.8 123 69.9
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 2.0e-45 186.4 163 57.1
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 2.6e-45 186.0 116 76.7
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 5.9e-45 184.9 139 65.5
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 5.9e-45 184.9 124 71.8
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 5.9e-45 184.9 124 71.8
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 7.6e-45 184.5 137 65.0
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 1.0e-44 184.1 133 67.7
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 2.2e-44 183.0 134 64.2
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 3.8e-44 182.2 138 63.8
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 4.2e-43 178.7 134 64.9
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 4.2e-43 178.7 116 70.7
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 5.5e-43 178.3 138 59.4
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 6.1e-42 174.9 135 62.2
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 1.3e-41 173.7 126 66.7
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 5.1e-41 171.8 139 61.9
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 5.7e-40 168.3 143 58.0
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 7.4e-40 167.9 154 53.9
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 2.8e-39 166.0 110 70.9
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 8.2e-39 164.5 136 59.6
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 1.8e-38 163.3 110 69.1
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 9.1e-38 161.0 131 61.1
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 5.9e-37 158.3 117 66.7
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 2.5e-35 152.9 91 79.1
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 1.0e-33 147.5 109 64.2
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 4.4e-32 142.1 122 51.6
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 5.7e-32 141.7 119 56.3
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 7.4e-32 141.4 104 61.5
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 1.7e-31 140.2 122 52.5
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 3.7e-31 139.0 119 52.9
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 1.4e-30 137.1 132 47.7
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 6.9e-30 134.8 116 50.9
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 2.5e-27 126.3 86 69.8
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 1.2e-26 124.0 85 64.7
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 3.0e-25 119.4 80 65.0
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 5.7e-24 115.2 121 43.8
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 3.8e-20 102.4 90 54.4
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 5.3e-14 82.0 87 51.7
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 5.9e-13 78.6 73 53.4
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 1.7e-07 60.5 95 36.8


User provided reference genes

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