Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62036633 Chenopodium quinoa HOM05D008038 ORTHO05D006902 0.0e+00 1146.3 569 100.0
AUR62034636 Chenopodium quinoa HOM05D008038 ORTHO05D006902 3.1e-235 818.5 467 88.4
EL10Ac7g18043 Beta vulgaris HOM05D008038 ORTHO05D006902 1.0e-169 600.9 467 65.7
Ah.15g095480 Amaranthus hybridus HOM05D008038 ORTHO05D006902 9.0e-126 454.9 396 59.3
Hund18510 Selenicereus undatus HOM05D008038 ORTHO05D006902 6.3e-119 432.2 455 52.3
Prupe.3G170200 Prunus persica HOM05D008038 ORTHO05D006902 2.3e-113 413.7 470 49.4
Duzib264G0258 Durio zibethinus HOM05D008038 ORTHO05D006902 4.8e-111 406.0 467 47.8
Dinv12711 Davidia involucrata HOM05D008038 ORTHO05D006902 8.2e-111 405.2 470 51.3
FvH4_6g37811 Fragaria vesca HOM05D008038 ORTHO05D006902 4.1e-110 402.9 461 49.5
Rhsim06G0121400 Rhododendron simsii HOM05D008038 ORTHO05D006902 1.5e-109 401.0 473 46.1
SGA_v2.0_scaffold46G17483 Striga asiatica HOM05D008038 ORTHO05D006902 5.9e-109 399.1 474 47.7
COL.COLO4_33719 Corchorus olitorius HOM05D008038 ORTHO05D006902 1.7e-108 397.5 531 44.3
Nitab4.5_0002737g0020 Nicotiana tabacum HOM05D008038 ORTHO05D006902 5.0e-108 396.0 434 50.2
Sc10g0010300 Simmondsia chinensis HOM05D008038 ORTHO05D006902 1.4e-107 394.4 430 49.8
PGSC0003DMG400017364 Solanum tuberosum HOM05D008038 ORTHO05D006902 1.9e-107 394.0 434 49.8
unitig_899.g15335 Utricularia gibba HOM05D008038 ORTHO05D006902 2.5e-107 393.7 427 48.0
Dinv12709 Davidia involucrata HOM05D008038 ORTHO05D006902 5.5e-107 392.5 427 51.8
Actinidia11192 Actinidia chinensis HOM05D008038 ORTHO05D006902 1.2e-106 391.3 485 46.2
Thecc.01G159700 Theobroma cacao HOM05D008038 ORTHO05D006902 1.2e-106 391.3 469 46.3
Sopen07g029260 Solanum pennellii HOM05D008038 ORTHO05D006902 3.6e-106 389.8 434 49.5
MSTRG.6764 Avicennia marina HOM05D008038 ORTHO05D006902 8.0e-106 388.7 488 46.3
Solyc07g055900.1 Solanum lycopersicum HOM05D008038 ORTHO05D006902 3.0e-105 386.7 432 49.3
CiPaw.04G110800 Carya illinoinensis HOM05D008038 ORTHO05D006902 6.7e-105 385.6 480 47.1
QL08p043670 Quercus lobata HOM05D008038 ORTHO05D006902 2.6e-104 383.6 474 46.0
CAN.G1481.7 Capsicum annuum HOM05D008038 ORTHO05D006902 4.4e-104 382.9 428 48.4
Nn1g09358 Nelumbo nucifera HOM05D008038 ORTHO05D006902 8.2e-103 378.6 423 49.4
Cc05_g09210 Coffea canephora HOM05D008038 ORTHO05D006902 1.1e-102 378.3 471 46.5
TAR375G0666 Trochodendron aralioides HOM05D008038 ORTHO05D006902 7.7e-101 372.1 459 47.7
Lj6g0005294 Lotus japonicus HOM05D008038 ORTHO05D006902 2.2e-100 370.5 425 46.6
Potri.007G054500 Populus trichocarpa HOM05D008038 ORTHO05D006902 2.9e-100 370.2 449 45.9
PGR142G1605 Punica granatum HOM05D008038 ORTHO05D006902 1.4e-97 361.3 474 45.4
Glyma.08G310900 Glycine max HOM05D008038 ORTHO05D006902 5.2e-97 359.4 433 45.5
Haze_15932 Corylus avellana HOM05D008038 ORTHO05D006902 6.7e-97 359.0 487 44.1
PSO675G5731 Papaver somniferum HOM05D008038 ORTHO05D006902 2.8e-95 353.6 431 46.9
Nn1g09359 Nelumbo nucifera HOM05D008038 ORTHO05D006902 5.3e-94 349.4 423 47.0
Manes.02G085900 Manihot esculenta HOM05D008038 ORTHO05D006902 9.1e-94 348.6 464 42.9
PSO541G6518 Papaver somniferum HOM05D008038 ORTHO05D006902 1.6e-93 347.8 431 46.2
Aqoxy6G01154 Aquilegia oxysepala HOM05D008038 ORTHO05D006902 2.7e-93 347.1 421 48.7
CANSAT64G2812 Cannabis sativa HOM05D008038 ORTHO05D006902 9.8e-88 328.6 448 44.2
Lalb_Chr20g0114131 Lupinus albus HOM05D008038 ORTHO05D006902 2.2e-87 327.4 426 43.0
CANSAT64G1128 Cannabis sativa HOM05D008038 ORTHO05D006902 9.1e-86 322.0 434 44.5
Aqoxy6G01155 Aquilegia oxysepala HOM05D008038 ORTHO05D006902 3.8e-84 316.6 439 43.7
SEGI_39030 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 1.1e-83 315.1 429 43.6
arahy.Tifrunner.gnm1.ann1.6HAR6G Arachis hypogaea HOM05D008038 ORTHO05D006902 1.0e-81 308.5 427 41.2
arahy.Tifrunner.gnm1.ann1.I6EGUB Arachis hypogaea HOM05D008038 ORTHO05D006902 1.4e-81 308.1 427 41.2
Eucgr.K01193 Eucalyptus grandis HOM05D008038 ORTHO05D006902 1.4e-78 298.1 325 47.1
Mapoly0078s0037 Marchantia polymorpha HOM05D008038 ORTHO05D006902 1.1e-75 288.5 441 40.6
COL.COLO4_07289 Corchorus olitorius HOM05D008038 ORTHO05D006902 2.8e-74 283.9 488 39.3
SEGI_04810 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 1.3e-71 275.0 442 40.7
Pp3c20_2590 Physcomitrium patens HOM05D008038 ORTHO05D006902 1.7e-71 274.6 447 40.0
COL.COLO4_25756 Corchorus olitorius HOM05D008038 ORTHO05D006902 2.9e-71 273.9 491 37.3
SEGI_33240 Sequoiadendron giganteum HOM05D008038 ORTHO05D006902 6.4e-71 272.7 424 40.8
CAN.G1481.4 Capsicum annuum HOM05D008038 ORTHO05D006902 3.2e-70 270.4 393 41.2
Oeu026475.1 Olea europaea HOM05D008038 ORTHO05D006902 4.6e-69 266.5 286 51.4
AagrBONN_evm.TU.Sc2ySwM_368.536 Anthoceros agrestis HOM05D008038 ORTHO05D006902 5.6e-67 259.6 452 37.8
Lj6g0001787 Lotus japonicus HOM05D008038 ORTHO05D006902 6.6e-60 236.1 295 45.8
PRCOL_00002007 Prasinoderma coloniale HOM05D008038 ORTHO05D006902 1.7e-52 211.5 447 33.8
PRCOL_00003757 Prasinoderma coloniale HOM05D008038 ORTHO05D006902 2.8e-50 204.1 428 34.1
Peaxi162Scf00154g00619 Petunia axillaris HOM05D008038 ORTHO05D006902 8.9e-49 199.1 251 46.6
Nitab4.5_0001121g0160 Nicotiana tabacum HOM05D008038 ORTHO05D006902 5.6e-43 179.9 244 44.3
Pp3c19_4830 Physcomitrium patens HOM05D008038 ORTHO05D006902 4.3e-35 153.7 482 28.6
Mapoly0207s0005 Marchantia polymorpha HOM05D008038 ORTHO05D006902 9.6e-35 152.5 519 27.9
AUR62001247 Chenopodium quinoa HOM05D008038 ORTHO05D006902 9.9e-24 115.9 165 44.8
Cre09.g417400 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 1.1e-22 112.5 466 26.2
AUR62025742 Chenopodium quinoa HOM05D009732 ORTHO05D010736 1.4e-22 112.1 61 90.2
SEGI_39080 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.0e-21 106.7 403 27.3
SEGI_34953 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.0e-20 105.9 401 28.2
AUR62042020 Chenopodium quinoa HOM05D007817 ORTHO05D010493 2.3e-20 104.8 53 96.2
PSO017G5635 Papaver somniferum HOM05D007914 ORTHO05D006902 3.9e-20 104.0 410 27.1
SEGI_30045 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.1e-19 102.4 405 27.2
Cre02.g142987 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 1.5e-19 102.1 471 27.6
Cre45.g760847 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 1.5e-19 102.1 471 27.6
AUR62015779 Chenopodium quinoa HOM05D009732 ORTHO05D010736 1.9e-19 101.7 54 90.7
Cre32.g758797 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 3.3e-19 100.9 474 27.4
SEGI_39398 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 9.6e-19 99.4 405 26.9
SEGI_01619 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.1e-18 98.2 405 26.9
SEGI_01018 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 3.7e-18 97.4 409 26.2
SEGI_13303 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 4.8e-18 97.1 408 25.5
SEGI_00654 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.4e-17 95.5 404 26.0
SEGI_14024 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.4e-17 95.5 405 25.9
Cre12.g551550 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 9.0e-17 92.8 275 29.1
PSO384G4122 Papaver somniferum HOM05D007914 ORTHO05D006902 1.5e-16 92.0 422 25.1
SEGI_08978 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 7.6e-16 89.7 386 26.2
SEGI_11424 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.3e-15 89.0 404 24.3
SEGI_09628 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.1e-14 85.9 283 31.1
SEGI_23601 Sequoiadendron giganteum HOM05D012154 ORTHO05D013100 1.1e-14 85.9 408 25.2
SEGI_30043 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.1e-14 85.9 283 31.1
Cre16.g685613 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 1.4e-14 85.5 238 30.3
SEGI_05518 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.9e-14 85.1 375 25.3
Cre06.g296150 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 5.5e-14 83.6 158 33.5
CiPaw.01G177700 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.2e-13 82.4 487 23.2
SEGI_24191 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.2e-13 82.4 290 28.3
SEGI_28448 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.2e-13 82.4 283 30.0
AUR62034071 Chenopodium quinoa HOM05D009732 ORTHO05D010736 1.0e-12 79.3 59 64.4
AUR62017759 Chenopodium quinoa HOM05D009732 ORTHO05D010736 1.8e-12 78.6 61 63.9
AUR62009336 Chenopodium quinoa HOM05D009732 ORTHO05D010736 3.0e-12 77.8 61 63.9
AUR62010785 Chenopodium quinoa HOM05D009732 ORTHO05D010736 3.0e-12 77.8 61 63.9
AUR62019926 Chenopodium quinoa HOM05D009732 ORTHO05D010736 3.0e-12 77.8 61 63.9
AUR62039824 Chenopodium quinoa HOM05D009732 ORTHO05D010736 3.0e-12 77.8 61 63.9
AUR62042792 Chenopodium quinoa HOM05D009732 ORTHO05D010736 3.9e-12 77.4 61 62.3
AUR62014696 Chenopodium quinoa HOM05D009732 ORTHO05D010736 5.1e-12 77.0 61 60.7
SEGI_04271 Sequoiadendron giganteum HOM05D012154 ORTHO05D006902 8.7e-12 76.3 393 22.4
AUR62003900 Chenopodium quinoa HOM05D009732 ORTHO05D010736 1.5e-11 75.5 61 62.3
CiPaw.14G107300 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.9e-11 75.1 397 27.0
AUR62004004 Chenopodium quinoa HOM05D009732 ORTHO05D010736 4.3e-11 73.9 61 62.3
AUR62025986 Chenopodium quinoa HOM05D009732 ORTHO05D010736 5.7e-11 73.6 61 60.7
SEGI_12977 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.7e-11 73.6 279 29.7
AUR62015122 Chenopodium quinoa HOM05D000684 ORTHO05D000688 9.7e-11 72.8 61 55.7
SEGI_01179 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.6e-10 72.0 278 26.6
SEGI_21011 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.6e-10 72.0 285 28.8
AUR62022114 Chenopodium quinoa HOM05D009732 ORTHO05D010736 2.8e-10 71.2 61 55.7
BolC4t21931H Brassica oleracea HOM05D000096 ORTHO05D000045 3.7e-10 70.9 463 25.9
AUR62041626 Chenopodium quinoa HOM05D009732 ORTHO05D010736 4.8e-10 70.5 61 55.7
FvH4_7g14272 Fragaria vesca HOM05D000096 ORTHO05D000045 6.3e-10 70.1 496 25.0
C03p47420 Brassica napus HOM05D000096 ORTHO05D000045 8.2e-10 69.7 466 24.0
C06p14120 Brassica napus HOM05D000096 ORTHO05D000045 1.1e-09 69.3 440 25.0
BolC6t36590H Brassica oleracea HOM05D000096 ORTHO05D000045 1.1e-09 69.3 440 25.0
SEGI_02873 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 1.1e-09 69.3 248 28.6
A04p12470 Brassica napus HOM05D000096 ORTHO05D000045 1.4e-09 68.9 434 26.0
CANSAT25G0106 Cannabis sativa HOM05D000096 ORTHO05D000045 1.8e-09 68.6 464 23.9
CiPaw.02G003800 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.4e-09 68.2 447 25.1
CiPaw.14G013400 Carya illinoinensis HOM05D000096 ORTHO05D000045 4.1e-09 67.4 373 24.7
AUR62039343 Chenopodium quinoa HOM05D009732 ORTHO05D010736 4.1e-09 67.4 57 61.4
Hma1.2p1_0871F.1_g231030 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 4.1e-09 67.4 431 24.1
BraA09t39509Z Brassica rapa HOM05D000096 ORTHO05D000045 5.3e-09 67.0 438 22.8
CANSAT25G3526 Cannabis sativa HOM05D000096 ORTHO05D000045 5.3e-09 67.0 475 23.8
CiPaw.03G085400 Carya illinoinensis HOM05D000096 ORTHO05D000045 5.3e-09 67.0 378 24.6
FvH4_5g25262 Fragaria vesca HOM05D000096 ORTHO05D000045 5.3e-09 67.0 495 24.4
SEGI_25194 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 5.3e-09 67.0 303 26.1
A09p34240 Brassica napus HOM05D000096 ORTHO05D000045 6.9e-09 66.6 482 23.0
C02p38310 Brassica napus HOM05D000096 ORTHO05D000045 6.9e-09 66.6 480 23.3
SEGI_17597 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.9e-09 66.6 244 27.9
Atru.chr4.45 Acer truncatum HOM05D000096 ORTHO05D000045 1.2e-08 65.9 431 24.8
CiPaw.09G189900 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.5e-08 65.5 437 26.1
CBR_g8252 Chara braunii HOM05D001007 ORTHO05D006705 1.5e-08 65.5 490 23.5
Lj6g0012163 Lotus japonicus HOM05D000096 ORTHO05D000045 2.0e-08 65.1 390 26.7
C06p16690 Brassica napus HOM05D000096 ORTHO05D000045 2.6e-08 64.7 443 24.8
CANSAT01G2838 Cannabis sativa HOM05D000096 ORTHO05D000045 2.6e-08 64.7 424 25.5
FvH4_5g24553 Fragaria vesca HOM05D000096 ORTHO05D000045 3.4e-08 64.3 386 26.2
CiPaw.05G146400 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.3e-07 62.4 470 24.7
AUR62042021 Chenopodium quinoa HOM05D009732 ORTHO05D010736 1.3e-07 62.4 35 82.9
CiPaw.07G209500 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.7e-07 62.0 468 25.2
ECA236G1250 Erigeron canadensis HOM05D000096 ORTHO05D001319 2.2e-07 61.6 400 23.8
Lalb_Chr09g0328691 Lupinus albus HOM05D000096 ORTHO05D000045 2.2e-07 61.6 426 24.2
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.9e-07 61.2 462 24.9
CiPaw.05G147700 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.9e-07 61.2 408 23.5
AUR62017245 Chenopodium quinoa HOM05D009732 ORTHO05D010736 2.9e-07 61.2 44 63.6
CiPaw.08G106200 Carya illinoinensis HOM05D000096 ORTHO05D000045 5.0e-07 60.5 420 23.8
SEGI_39857 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 6.5e-07 60.1 347 25.1
AUR62015493 Chenopodium quinoa HOM05D006072 ORTHO05D007363 8.5e-07 59.7 61 45.9
ECA233G0447 Erigeron canadensis HOM05D000096 ORTHO05D000045 8.5e-07 59.7 424 25.2
TPR.G15922 Trifolium pratense HOM05D000096 ORTHO05D000045 8.5e-07 59.7 224 27.2
CiPaw.09G061200 Carya illinoinensis HOM05D000096 ORTHO05D000045 1.1e-06 59.3 410 24.6
AUR62036316 Chenopodium quinoa HOM05D000045 ORTHO05D000067 1.9e-06 58.5 61 45.9
ECA246G2676 Erigeron canadensis HOM05D000096 ORTHO05D000045 1.9e-06 58.5 405 24.0
CiPaw.08G169300 Carya illinoinensis HOM05D000096 ORTHO05D000045 2.5e-06 58.2 415 23.6
Dinv14086 Davidia involucrata HOM05D000096 ORTHO05D000045 2.5e-06 58.2 460 23.9
SEGI_27597 Sequoiadendron giganteum HOM05D007914 ORTHO05D006902 2.5e-06 58.2 132 28.0
Cre12.g485438 Chlamydomonas reinhardtii HOM05D008038 ORTHO05D006902 3.2e-06 57.8 74 43.2
CANSAT64G0226 Cannabis sativa HOM05D000096 ORTHO05D000045 4.2e-06 57.4 473 23.5
Os04g0357300 Oryza sativa ssp. japonica HOM05D000096 ORTHO05D000045 4.2e-06 57.4 329 24.3
PSO782G2633 Papaver somniferum HOM05D000096 ORTHO05D000045 4.2e-06 57.4 424 24.1
EL10Ac7g18199 Beta vulgaris HOM05D000096 ORTHO05D000045 7.2e-06 56.6 458 23.4
CBR_g32393 Chara braunii HOM05D000096 ORTHO05D000045 7.2e-06 56.6 133 33.8
Hund26573 Selenicereus undatus HOM05D000045 ORTHO05D010736 9.4e-06 56.2 59 47.5


User provided reference genes

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