Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 0.0e+00 1475.3 785 100.0
AUR62031141 Chenopodium quinoa HOM05D007489 ORTHO05D008037 0.0e+00 1146.0 808 79.1
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 9.8e-147 525.0 851 46.1
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 9.7e-70 269.2 861 33.1
Ah.10g026690 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.6e-56 225.3 372 44.4
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 1.7e-45 188.7 845 28.4
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 3.6e-40 171.0 825 29.6
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 8.9e-39 166.4 847 29.5
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 5.7e-38 163.7 833 30.0
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 4.9e-37 160.6 830 29.5
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 1.1e-36 159.5 856 28.0
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 3.1e-36 157.9 257 44.0
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 5.9e-35 153.7 823 28.3
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 1.0e-34 152.9 852 27.9
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 1.3e-34 152.5 866 28.5
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 3.3e-33 147.9 838 27.9
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 4.3e-33 147.5 815 27.9
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 5.6e-33 147.1 833 29.1
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 2.1e-32 145.2 861 29.0
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 3.1e-31 141.4 822 28.5
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 3.1e-31 141.4 847 28.0
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 3.1e-31 141.4 892 27.5
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 8.9e-31 139.8 820 27.6
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 2.0e-30 138.7 821 27.5
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 5.8e-30 137.1 801 27.7
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 2.9e-29 134.8 813 27.3
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 1.4e-28 132.5 780 27.3
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 1.4e-28 132.5 834 26.9
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 2.0e-27 128.6 851 26.6
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 2.7e-27 128.3 868 26.6
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 6.0e-27 127.1 840 27.9
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 2.3e-26 125.2 960 26.8
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 5.0e-26 124.0 834 27.6
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 5.0e-26 124.0 856 26.3
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 6.6e-26 123.6 837 28.3
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 1.9e-25 122.1 810 27.2
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 7.3e-25 120.2 864 26.5
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 7.3e-25 120.2 797 26.5
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 1.2e-24 119.4 852 27.7
Hund23951 Selenicereus undatus HOM05D007489 ORTHO05D008037 2.1e-24 118.6 499 27.7
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 3.6e-24 117.9 939 26.5
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 4.7e-24 117.5 812 26.7
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 5.2e-23 114.0 865 26.6
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 6.8e-23 113.6 522 28.9
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 2.6e-22 111.7 847 27.9
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 5.8e-22 110.5 817 25.7
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 5.8e-22 110.5 260 36.9
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 9.8e-22 109.8 883 27.1
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 1.3e-21 109.4 340 32.6
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 1.7e-21 109.0 798 25.7
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 4.9e-21 107.5 849 25.6
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 1.1e-20 106.3 833 27.5
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 3.2e-20 104.8 154 41.6
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 4.1e-20 104.4 839 27.4
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 7.0e-20 103.6 847 26.3
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 3.5e-19 101.3 873 26.1
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 7.8e-19 100.1 201 37.8
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 1.0e-18 99.8 832 28.2
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 3.9e-18 97.8 827 27.1
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 5.1e-18 97.4 839 26.3
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 8.6e-18 96.7 855 26.7
COL.COLO4_31347 Corchorus olitorius HOM05D007489 ORTHO05D008037 1.1e-17 96.3 168 42.3
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 1.5e-17 95.9 456 29.8
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 2.5e-17 95.1 886 24.4
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 2.5e-17 95.1 233 35.6
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 4.3e-17 94.4 553 26.9
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 4.3e-17 94.4 157 42.7
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 5.6e-17 94.0 859 26.5
CsaV3_6G050690 Cucumis sativus L. HOM05D007489 ORTHO05D008037 1.2e-16 92.8 127 48.0
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 1.2e-16 92.8 143 43.4
Os01g0755100 Oryza sativa ssp. japonica HOM05D007489 ORTHO05D008037 1.6e-16 92.4 807 24.9
PGR004G2208 Punica granatum HOM05D007489 ORTHO05D008037 1.6e-16 92.4 124 48.4
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 2.8e-16 91.7 887 27.3
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 1.1e-15 89.7 881 26.6
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 1.4e-15 89.4 873 25.3
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 5.8e-14 84.0 841 25.9
arahy.Tifrunner.gnm1.ann1.X1E7Z2 Arachis hypogaea HOM05D007489 ORTHO05D008037 1.7e-13 82.4 802 26.1
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 4.9e-13 80.9 845 25.6
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 4.9e-13 80.9 908 24.1
Cpa.g.sc7.37 Carica papaya HOM05D007489 ORTHO05D008037 3.2e-12 78.2 375 27.2
Zm00001eb152860 Zea mays HOM05D007489 ORTHO05D008037 4.1e-12 77.8 798 26.2
BolC7t45475H Brassica oleracea HOM05D010718 ORTHO05D008037 5.4e-12 77.4 837 25.6
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 5.4e-12 77.4 902 23.5
arahy.Tifrunner.gnm1.ann1.8IS92U Arachis hypogaea HOM05D007489 ORTHO05D008037 9.2e-12 76.6 65 60.0
SalBow1G4805 Salvia bowleyana HOM05D007489 ORTHO05D008037 9.2e-12 76.6 67 52.2
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 1.2e-11 76.3 901 27.0
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 2.1e-11 75.5 857 25.7
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 7.8e-11 73.6 838 25.3
SalBow2G2687 Salvia bowleyana HOM05D007489 ORTHO05D008037 7.8e-11 73.6 91 41.8
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 1.0e-10 73.2 887 27.3
MBI06_g31401_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 1.0e-10 73.2 124 42.7
Nitab4.5_0000376g0220 Nicotiana tabacum HOM05D007489 ORTHO05D008037 1.0e-10 73.2 100 47.0
Peaxi162Scf00223g01422 Petunia axillaris HOM05D007489 ORTHO05D008037 3.3e-09 68.2 90 51.1
Aqoxy534s001 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 7.3e-09 67.0 102 45.1
HPP92_008016 Vanilla planifolia HOM05D007489 ORTHO05D008037 2.1e-08 65.5 794 23.0
Lalb_Chr16g0384211 Lupinus albus HOM05D007489 ORTHO05D008037 6.2e-08 63.9 500 26.6
SMO340G0226 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 6.2e-08 63.9 59 52.5
SMO356G0683 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 8.1e-08 63.5 59 52.5
VMungo0251G2273 Vigna mungo HOM05D007489 ORTHO05D008037 8.1e-08 63.5 223 32.3
unitig_0.g132 Utricularia gibba HOM05D007489 ORTHO05D008037 2.4e-07 62.0 256 30.5
MD05G1304800 Malus domestica HOM05D007489 ORTHO05D008037 4.0e-07 61.2 55 56.4
Eucgr.D00548 Eucalyptus grandis HOM05D007489 ORTHO05D008037 8.9e-07 60.1 36 83.3
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 4.4e-06 57.8 783 23.0
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 5.8e-06 57.4 784 23.0


User provided reference genes

Program Settings