Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62036301 Chenopodium quinoa HOM05D006402 ORTHO05D008099 4.9e-79 297.7 150 100.0
AUR62016156 Chenopodium quinoa HOM05D006402 ORTHO05D008099 1.8e-73 279.3 150 92.7
EL10Ac1g02084 Beta vulgaris HOM05D006402 ORTHO05D008099 1.5e-64 249.6 150 82.0
Cc10_g01150 Coffea canephora HOM05D006402 ORTHO05D008099 2.7e-53 212.2 124 83.1
COL.COLO4_26087 Corchorus olitorius HOM05D006402 ORTHO05D008099 1.7e-52 209.5 125 81.6
Dinv18455 Davidia involucrata HOM05D006402 ORTHO05D008099 5.1e-52 208.0 123 82.9
Manes.05G142900 Manihot esculenta HOM05D006402 ORTHO05D008099 5.1e-52 208.0 138 75.4
Sc02g0008870 Simmondsia chinensis HOM05D006402 ORTHO05D008099 8.6e-52 207.2 127 81.9
MSTRG.1145 Avicennia marina HOM05D006402 ORTHO05D008099 1.5e-51 206.5 125 83.2
Duzib093G1673 Durio zibethinus HOM05D006402 ORTHO05D008099 1.9e-51 206.1 125 80.0
Gohir.A06G001000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.9e-51 206.1 146 71.9
Sed0012705 Sechium edule HOM05D006402 ORTHO05D008099 7.3e-51 204.1 126 76.2
Lj4C17T8 Lonicera japonica HOM05D006402 ORTHO05D008099 9.6e-51 203.8 153 68.0
Nn6g34597 Nelumbo nucifera HOM05D006402 ORTHO05D008099 1.6e-50 203.0 121 81.0
MELO3C011341.2 Cucumis melo HOM05D006402 ORTHO05D008099 2.1e-50 202.6 126 76.2
Gorai.010G001200 Gossypium raimondii HOM05D006402 ORTHO05D008099 3.6e-50 201.8 146 71.2
PGR142G1353 Punica granatum HOM05D006402 ORTHO05D008099 3.6e-50 201.8 125 77.6
Potri.002G016600 Populus trichocarpa HOM05D006402 ORTHO05D008099 4.7e-50 201.4 125 75.2
Gohir.A09G028000 Gossypium hirsutum HOM05D006402 ORTHO05D008099 6.2e-50 201.1 146 71.9
Haze_22699 Corylus avellana HOM05D006402 ORTHO05D008099 8.1e-50 200.7 127 77.2
Gorai.006G031900 Gossypium raimondii HOM05D006402 ORTHO05D008099 8.1e-50 200.7 146 72.6
Sed0017306 Sechium edule HOM05D006402 ORTHO05D008099 8.1e-50 200.7 126 76.2
DCAR_007723 Daucus carota HOM05D006402 ORTHO05D008099 1.1e-49 200.3 143 69.2
Nitab4.5_0003030g0100 Nicotiana tabacum HOM05D006402 ORTHO05D008099 1.1e-49 200.3 124 77.4
CiPaw.08G069100 Carya illinoinensis HOM05D006402 ORTHO05D008099 1.4e-49 199.9 127 78.0
Migut.C00897 Erythranthe guttata HOM05D006402 ORTHO05D008099 1.4e-49 199.9 155 70.3
HanXRQChr14g0429471 Helianthus annuus HOM05D006402 ORTHO05D008099 1.4e-49 199.9 124 76.6
Peaxi162Scf00174g00075 Petunia axillaris HOM05D006402 ORTHO05D008099 1.4e-49 199.9 124 78.2
SalBow7G2419 Salvia bowleyana HOM05D006402 ORTHO05D008099 2.4e-49 199.1 132 78.0
SalBow6G2408 Salvia bowleyana HOM05D006402 ORTHO05D008099 3.1e-49 198.7 151 71.5
Cfa014004 Carpinus fangiana HOM05D006402 ORTHO05D008099 4.0e-49 198.4 128 75.8
Rhsim07G0248600 Rhododendron simsii HOM05D006402 ORTHO05D008099 5.2e-49 198.0 127 74.8
Ciclev10002722m.g Citrus clementina HOM05D006402 ORTHO05D008099 6.9e-49 197.6 149 69.8
Sabra02G0013300 Salix brachista HOM05D006402 ORTHO05D008099 6.9e-49 197.6 125 74.4
SGA_v2.0_scaffold292G47394 Striga asiatica HOM05D006402 ORTHO05D008099 6.9e-49 197.6 126 76.2
arahy.Tifrunner.gnm1.ann1.KWDT0T Arachis hypogaea HOM05D006402 ORTHO05D008099 1.2e-48 196.8 125 73.6
Sopen04g035580 Solanum pennellii HOM05D006402 ORTHO05D008099 1.5e-48 196.4 124 76.6
CSS0047659 Camellia sinensis var. sinensis HOM05D006402 ORTHO05D008099 2.6e-48 195.7 128 75.0
PGSC0003DMG400009954 Solanum tuberosum HOM05D006402 ORTHO05D008099 2.6e-48 195.7 123 77.2
Hma1.2p1_0023F.1_g015780 Hydrangea macrophylla HOM05D006402 ORTHO05D008099 3.4e-48 195.3 127 74.0
QL02p012927 Quercus lobata HOM05D006402 ORTHO05D008099 3.4e-48 195.3 126 77.0
Solyc04g081940.3 Solanum lycopersicum HOM05D006402 ORTHO05D008099 3.4e-48 195.3 122 77.0
TAR628G1405 Trochodendron aralioides HOM05D006402 ORTHO05D008099 5.8e-48 194.5 121 75.2
ClCG08G014030 Citrullus lanatus HOM05D006402 ORTHO05D008099 7.6e-48 194.1 121 75.2
Solyc02g085937.1 Solanum lycopersicum HOM05D006402 ORTHO05D008099 7.6e-48 194.1 121 76.0
Aa31LG4G6170 Aethionema arabicum HOM05D006402 ORTHO05D008099 9.9e-48 193.7 141 70.2
PGSC0003DMG400012651 Solanum tuberosum HOM05D006402 ORTHO05D008099 9.9e-48 193.7 124 74.2
MD08G1008000 Malus domestica HOM05D006402 ORTHO05D008099 1.7e-47 193.0 126 73.8
Sc02g0008830 Simmondsia chinensis HOM05D006402 ORTHO05D008099 2.2e-47 192.6 127 77.2
Sopen02g030620 Solanum pennellii HOM05D006402 ORTHO05D008099 3.8e-47 191.8 119 76.5
unitig_32.g11245 Utricularia gibba HOM05D006402 ORTHO05D008099 3.8e-47 191.8 124 77.4
Thecc.08G051300 Theobroma cacao HOM05D006402 ORTHO05D008099 6.4e-47 191.0 125 76.0
Prupe.1G359800 Prunus persica HOM05D006402 ORTHO05D008099 8.4e-47 190.7 125 74.4
CAN.G311.71 Capsicum annuum HOM05D006402 ORTHO05D008099 1.1e-46 190.3 124 73.4
Aqoxy6G00455 Aquilegia oxysepala HOM05D006402 ORTHO05D008099 1.4e-46 189.9 124 71.8
AL2G36080 Arabidopsis lyrata HOM05D006402 ORTHO05D008099 1.4e-46 189.9 126 77.8
arahy.Tifrunner.gnm1.ann1.R93WT9 Arachis hypogaea HOM05D006402 ORTHO05D008099 2.4e-46 189.1 125 71.2
CANSAT25G3089 Cannabis sativa HOM05D006402 ORTHO05D008099 2.4e-46 189.1 127 72.4
CARHR069600 Cardamine hirsuta HOM05D006402 ORTHO05D008099 4.2e-46 188.3 126 75.4
Carub.0002s2294 Capsella rubella HOM05D006402 ORTHO05D008099 5.4e-46 188.0 126 77.0
Cpa.g.sc81.101 Carica papaya HOM05D006402 ORTHO05D008099 5.4e-46 188.0 123 74.0
Sp5g31180 Schrenkiella parvula HOM05D006402 ORTHO05D008099 5.4e-46 188.0 126 76.2
BcaC08g47098 Brassica carinata HOM05D006402 ORTHO05D008099 1.2e-45 186.8 126 75.4
THA.LOC104811442 Tarenaya hassleriana HOM05D006402 ORTHO05D008099 1.6e-45 186.4 138 68.8
Thhalv10019271m.g Eutrema salsugineum HOM05D006402 ORTHO05D008099 3.5e-45 185.3 124 76.6
AT1G76060 Arabidopsis thaliana HOM05D006402 ORTHO05D008099 4.6e-45 184.9 126 76.2
ECA238G1428 Erigeron canadensis HOM05D006402 ORTHO05D008099 7.8e-45 184.1 123 73.2
Atru.chr13.220 Acer truncatum HOM05D006402 ORTHO05D008099 1.0e-44 183.7 125 72.0
A02p20400 Brassica napus HOM05D006402 ORTHO05D008099 3.0e-44 182.2 122 76.2
TWI14G1330 Tripterygium wilfordii HOM05D006402 ORTHO05D008099 3.0e-44 182.2 125 71.2
MBI03_g11314_MAGBIO Magnolia biondii HOM05D006402 ORTHO05D008099 1.5e-43 179.9 123 69.9
A07p41620 Brassica napus HOM05D006402 ORTHO05D008099 1.9e-43 179.5 127 70.9
BraA07t31691Z Brassica rapa HOM05D006402 ORTHO05D008099 1.9e-43 179.5 127 70.9
BolC6t40039H Brassica oleracea HOM05D006402 ORTHO05D008099 3.3e-43 178.7 127 70.9
C06p50000 Brassica napus HOM05D006402 ORTHO05D008099 9.6e-43 177.2 127 70.1
HPP92_013449 Vanilla planifolia HOM05D006402 ORTHO05D008099 1.3e-42 176.8 122 71.3
CDE05G2406 Ceratophyllum demersum HOM05D000228 ORTHO05D001122 2.8e-42 175.6 114 75.4
VMungo0647G0728 Vigna mungo HOM05D006402 ORTHO05D008099 2.8e-42 175.6 132 65.2
Lalb_Chr23g0266011 Lupinus albus HOM05D006402 ORTHO05D008099 3.6e-42 175.3 136 62.5
Ca_13483_v3 Cicer arietinum L. HOM05D006402 ORTHO05D008099 1.1e-41 173.7 126 67.5
FvH4_2g37980 Fragaria vesca HOM05D006402 ORTHO05D008099 1.1e-41 173.7 148 63.5
Eucgr.F01698 Eucalyptus grandis HOM05D006402 ORTHO05D008099 1.8e-41 172.9 131 68.7
FAN20G3208 Fragaria x ananassa HOM05D006402 ORTHO05D008099 2.4e-41 172.6 148 62.8
CsaV3_2G024420 Cucumis sativus L. HOM05D006402 ORTHO05D008099 3.1e-41 172.2 126 67.5
PSO675G2459 Papaver somniferum HOM05D006402 ORTHO05D008099 5.3e-41 171.4 129 65.9
RcHm_v2.0_Chr6g0303641 Rosa chinensis HOM05D006402 ORTHO05D008099 5.3e-41 171.4 141 63.8
FAN27G3062 Fragaria x ananassa HOM05D006402 ORTHO05D008099 9.0e-41 170.6 148 62.2
ATR0580G246 Amborella trichopoda HOM05D006402 ORTHO05D008099 1.2e-40 170.2 126 68.3
Phvul.001G003000 Phaseolus vulgaris HOM05D006402 ORTHO05D008099 3.4e-40 168.7 127 63.8
Glyma.17G261100 Glycine max HOM05D006402 ORTHO05D008099 9.9e-40 167.2 140 60.7
Gohir.D09G027401 Gossypium hirsutum HOM05D006402 ORTHO05D008099 1.3e-39 166.8 146 63.0
PSO541G5119 Papaver somniferum HOM05D006402 ORTHO05D008099 2.2e-39 166.0 120 67.5
SEGI_22650 Sequoiadendron giganteum HOM05D006402 ORTHO05D008099 3.8e-39 165.2 125 65.6
ATR0680G026 Amborella trichopoda HOM05D006402 ORTHO05D008099 6.4e-39 164.5 126 65.9
Lj5g0026723 Lotus japonicus HOM05D006402 ORTHO05D008099 8.4e-39 164.1 126 66.7
Medtr1g026078 Medicago truncatula HOM05D006402 ORTHO05D008099 1.9e-38 162.9 126 65.1
Glyma.09G042800 Glycine max HOM05D006402 ORTHO05D008099 2.4e-38 162.5 140 58.6
TPR.G26406 Trifolium pratense HOM05D006402 ORTHO05D008099 2.4e-38 162.5 125 66.4
Lsat_1_v5_gn_2_6761 Lactuca sativa HOM05D006402 ORTHO05D008099 4.2e-38 161.8 123 67.5
Actinidia29765 Actinidia chinensis HOM05D006402 ORTHO05D008099 1.2e-37 160.2 123 63.4
Os03g0136600 Oryza sativa ssp. japonica HOM05D006402 ORTHO05D008099 1.2e-37 160.2 137 60.6
Psat6g001160 Pisum sativum HOM05D006402 ORTHO05D008099 1.6e-37 159.8 140 60.0
Zm00001eb002920 Zea mays HOM05D006402 ORTHO05D008099 3.0e-36 155.6 126 63.5
SHI08020 Sapria himalayana HOM05D006402 ORTHO05D008099 3.9e-36 155.2 123 63.4
BcaC03g15641 Brassica carinata HOM05D006402 ORTHO05D008099 6.9e-33 144.4 128 61.7
Pp3c14_25160 Physcomitrium patens HOM05D006402 ORTHO05D008099 4.6e-29 131.7 132 50.8
SMO358G0213 Selaginella moellendorffii HOM05D006402 ORTHO05D008099 4.6e-29 131.7 119 52.9
BolC2t09355H Brassica oleracea HOM05D006402 ORTHO05D008099 1.9e-27 126.3 125 55.2
BraA02t07072Z Brassica rapa HOM05D006402 ORTHO05D008099 1.9e-27 126.3 93 69.9
C02p33500 Brassica napus HOM05D006402 ORTHO05D008099 2.5e-27 125.9 125 55.2
BcaC08g47099 Brassica carinata HOM05D006402 ORTHO05D008099 4.0e-25 118.6 76 77.6
AagrBONN_evm.TU.Sc2ySwM_228.4698 Anthoceros agrestis HOM05D006402 ORTHO05D008099 5.3e-25 118.2 117 52.1
CBR_g51533 Chara braunii HOM05D006402 ORTHO05D008099 3.2e-22 109.0 126 47.6
PRCOL_00001167 Prasinoderma coloniale HOM05D006402 ORTHO05D008099 3.2e-22 109.0 104 54.8
Mapoly0186s0006 Marchantia polymorpha HOM05D006402 ORTHO05D008099 1.6e-21 106.7 123 47.2
QL08p014343 Quercus lobata HOM05D006402 ORTHO05D008099 2.1e-21 106.3 122 50.0
MD15G1006900 Malus domestica HOM05D006402 ORTHO05D008099 5.7e-19 98.2 91 59.3
Eucgr.F01697 Eucalyptus grandis HOM05D006402 ORTHO05D008099 2.2e-18 96.3 113 49.6
MCO02G370 Micromonas commoda HOM05D006402 ORTHO05D008099 1.2e-16 90.5 81 53.1
Cre01.g028150 Chlamydomonas reinhardtii HOM05D006402 ORTHO05D008099 1.5e-16 90.1 109 42.2
Sed0026898 Sechium edule HOM05D006402 ORTHO05D008099 4.6e-13 78.6 117 39.3
BcaC08g47297 Brassica carinata HOM05D006402 ORTHO05D008099 7.9e-13 77.8 121 39.7
Glyma.14G222200 Glycine max HOM05D006402 ORTHO05D008099 1.9e-11 73.2 57 68.4
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 1.3e-07 60.5 49 69.4


User provided reference genes

Program Settings