Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62036200 Chenopodium quinoa HOM05D006357 ORTHO05D007925 6.4e-51 203.8 100 100.0
AUR62036192 Chenopodium quinoa HOM05D006357 ORTHO05D007925 3.6e-46 188.0 96 95.8
AUR62009745 Chenopodium quinoa HOM05D006357 ORTHO05D007925 2.6e-44 181.8 96 92.7
Ah.15g095880 Amaranthus hybridus HOM05D006357 ORTHO05D007925 1.9e-39 165.6 95 82.1
Sc21g0007020 Simmondsia chinensis HOM05D006357 ORTHO05D007925 2.4e-29 132.1 93 65.6
CSS0003287 Camellia sinensis var. sinensis HOM05D006357 ORTHO05D007925 5.8e-28 127.5 95 64.2
Dinv22833 Davidia involucrata HOM05D006357 ORTHO05D007925 7.6e-28 127.1 95 60.0
ClCG02G022220 Citrullus lanatus HOM05D006357 ORTHO05D007925 9.9e-28 126.7 95 63.2
MELO3C014499.2 Cucumis melo HOM05D006357 ORTHO05D007925 9.9e-28 126.7 95 62.1
SalBow3G2384 Salvia bowleyana HOM05D006357 ORTHO05D007925 9.9e-28 126.7 95 63.2
Manes.11G162800 Manihot esculenta HOM05D006357 ORTHO05D007925 1.7e-27 125.9 95 62.1
Nitab4.5_0006120g0030 Nicotiana tabacum HOM05D006357 ORTHO05D007925 1.7e-27 125.9 95 61.1
Solyc11g068550.1 Solanum lycopersicum HOM05D006357 ORTHO05D007925 1.7e-27 125.9 95 62.1
Sopen11g027270 Solanum pennellii HOM05D006357 ORTHO05D007925 1.7e-27 125.9 95 62.1
PGSC0003DMG400026335 Solanum tuberosum HOM05D006357 ORTHO05D007925 1.7e-27 125.9 95 62.1
CsaV3_6G038350 Cucumis sativus L. HOM05D006357 ORTHO05D007925 2.2e-27 125.6 95 61.1
Aqoxy2G01095 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 2.9e-27 125.2 95 60.0
Nitab4.5_0005641g0010 Nicotiana tabacum HOM05D006357 ORTHO05D007925 4.9e-27 124.4 95 61.1
VMungo1127G1055 Vigna mungo HOM05D006357 ORTHO05D007925 6.4e-27 124.0 94 61.7
Prupe.6G132700 Prunus persica HOM05D006357 ORTHO05D007925 8.4e-27 123.6 95 60.0
TAR633G1946 Trochodendron aralioides HOM05D006357 ORTHO05D007925 8.4e-27 123.6 93 62.4
Thecc.09G281200 Theobroma cacao HOM05D006357 ORTHO05D007925 1.9e-26 122.5 95 61.1
Gohir.A07G110700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 5.4e-26 120.9 90 62.2
Gohir.D07G114400 Gossypium hirsutum HOM05D006357 ORTHO05D007925 5.4e-26 120.9 90 62.2
Gorai.001G122700 Gossypium raimondii HOM05D006357 ORTHO05D007925 5.4e-26 120.9 90 62.2
MBI01_g14623_MAGBIO Magnolia biondii HOM05D006357 ORTHO05D007925 5.4e-26 120.9 95 60.0
MD03G1147800 Malus domestica HOM05D006357 ORTHO05D007925 7.1e-26 120.6 95 57.9
MSTRG.12374 Avicennia marina HOM05D006357 ORTHO05D007925 1.2e-25 119.8 94 59.6
Glyma.11G182400 Glycine max HOM05D006357 ORTHO05D007925 1.2e-25 119.8 94 60.6
arahy.Tifrunner.gnm1.ann1.5186VC Arachis hypogaea HOM05D006357 ORTHO05D007925 1.6e-25 119.4 94 61.7
arahy.Tifrunner.gnm1.ann1.JXBE2X Arachis hypogaea HOM05D006357 ORTHO05D007925 1.6e-25 119.4 94 61.7
Cfa010003 Carpinus fangiana HOM05D006357 ORTHO05D007925 1.6e-25 119.4 95 58.9
SGA_v2.0_scaffold177G39425 Striga asiatica HOM05D006357 ORTHO05D007925 1.6e-25 119.4 96 59.4
EL10Ac7g15835 Beta vulgaris HOM05D006357 ORTHO05D007925 2.1e-25 119.0 96 60.4
PGR119G0351 Punica granatum HOM05D006357 ORTHO05D007925 2.7e-25 118.6 90 62.2
Actinidia37077 Actinidia chinensis HOM05D006357 ORTHO05D007925 6.0e-25 117.5 92 58.7
Ah.08g215640 Amaranthus hybridus HOM05D006357 ORTHO05D007925 6.0e-25 117.5 96 61.5
Ciclev10029363m.g Citrus clementina HOM05D006357 ORTHO05D007925 6.0e-25 117.5 95 58.9
PSO801G0234 Papaver somniferum HOM05D006357 ORTHO05D007925 6.0e-25 117.5 95 58.9
Duzib150G0376 Durio zibethinus HOM05D006357 ORTHO05D007925 7.8e-25 117.1 89 60.7
Lalb_Chr01g0004891 Lupinus albus HOM05D006357 ORTHO05D007925 7.8e-25 117.1 94 59.6
PSO339G3266 Papaver somniferum HOM05D006357 ORTHO05D007925 7.8e-25 117.1 95 58.9
unitig_699.g19178 Utricularia gibba HOM05D006357 ORTHO05D007925 7.8e-25 117.1 95 58.9
Hma1.2p1_0587F.1_g184180 Hydrangea macrophylla HOM05D006357 ORTHO05D007925 1.0e-24 116.7 95 56.8
Eucgr.J00502 Eucalyptus grandis HOM05D006357 ORTHO05D007925 1.3e-24 116.3 93 55.9
Phvul.011G095000 Phaseolus vulgaris HOM05D006357 ORTHO05D007925 1.3e-24 116.3 94 58.5
Atru.chr3.3206 Acer truncatum HOM05D006357 ORTHO05D007925 2.3e-24 115.5 95 56.8
Atru.chr3.3208 Acer truncatum HOM05D006357 ORTHO05D007925 2.3e-24 115.5 95 56.8
Cc01_g08980 Coffea canephora HOM05D006357 ORTHO05D007925 2.3e-24 115.5 93 58.1
Rhsim01G0204700 Rhododendron simsii HOM05D006357 ORTHO05D007925 2.3e-24 115.5 95 56.8
Gorai.004G010300 Gossypium raimondii HOM05D006357 ORTHO05D007925 3.0e-24 115.2 95 56.8
HanXRQChr01g0024501 Helianthus annuus HOM05D006357 ORTHO05D007925 3.0e-24 115.2 95 56.8
FvH4_3g25140 Fragaria vesca HOM05D006357 ORTHO05D007925 3.9e-24 114.8 95 57.9
Gohir.D08G016000 Gossypium hirsutum HOM05D006357 ORTHO05D007925 3.9e-24 114.8 95 56.8
Lj3g0017887 Lotus japonicus HOM05D006357 ORTHO05D007925 3.9e-24 114.8 94 56.4
CANSAT54G2809 Cannabis sativa HOM05D006357 ORTHO05D007925 5.1e-24 114.4 96 57.3
THA.LOC104814785 Tarenaya hassleriana HOM05D006357 ORTHO05D007925 5.1e-24 114.4 95 56.8
Gohir.A08G005700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 6.6e-24 114.0 95 56.8
TWI75G1708 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 6.6e-24 114.0 95 57.9
Lj2P966T16 Lonicera japonica HOM05D006357 ORTHO05D007925 1.1e-23 113.2 95 54.7
RcHm_v2.0_Chr5g0046241 Rosa chinensis HOM05D006357 ORTHO05D007925 1.1e-23 113.2 95 57.9
Sp5g16810 Schrenkiella parvula HOM05D006357 ORTHO05D007925 1.1e-23 113.2 95 57.9
Sed0020794 Sechium edule HOM05D006357 ORTHO05D007925 1.1e-23 113.2 95 56.8
TWI79G0514 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 1.1e-23 113.2 95 58.9
BcaB01g01165 Brassica carinata HOM05D006357 ORTHO05D007925 1.9e-23 112.5 90 60.0
TPR.G17225 Trifolium pratense HOM05D006357 ORTHO05D007925 1.9e-23 112.5 94 57.4
A06p22010 Brassica napus HOM05D006357 ORTHO05D007925 2.5e-23 112.1 95 54.7
BraA06t25289Z Brassica rapa HOM05D006357 ORTHO05D007925 2.5e-23 112.1 95 54.7
CARHR104480 Cardamine hirsuta HOM05D006357 ORTHO05D007925 2.5e-23 112.1 95 55.8
Lsat_1_v5_gn_1_59200 Lactuca sativa HOM05D006357 ORTHO05D007925 2.5e-23 112.1 95 55.8
GSVIVG01036107001 Vitis vinifera HOM05D006357 ORTHO05D007925 2.5e-23 112.1 94 58.5
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 3.3e-23 111.7 88 63.6
Carub.0005s1011 Capsella rubella HOM05D006357 ORTHO05D007925 3.3e-23 111.7 95 56.8
Migut.N02483 Erythranthe guttata HOM05D006357 ORTHO05D007925 3.3e-23 111.7 86 59.3
Actinidia35469 Actinidia chinensis HOM05D006357 ORTHO05D007925 4.3e-23 111.3 87 58.6
Nn6g34850 Nelumbo nucifera HOM05D006357 ORTHO05D007925 4.3e-23 111.3 95 50.5
CiPaw.13G134700 Carya illinoinensis HOM05D006357 ORTHO05D007925 5.6e-23 110.9 94 55.3
Medtr4g052840 Medicago truncatula HOM05D006357 ORTHO05D007925 5.6e-23 110.9 94 58.5
Thhalv10010749m.g Eutrema salsugineum HOM05D006357 ORTHO05D007925 7.3e-23 110.5 95 55.8
FAN21G3578 Fragaria x ananassa HOM05D006357 ORTHO05D007925 7.3e-23 110.5 95 55.8
Sc06g0008780 Simmondsia chinensis HOM05D006357 ORTHO05D007925 7.3e-23 110.5 94 53.2
FvH4_3g25160 Fragaria vesca HOM05D006357 ORTHO05D007925 1.3e-22 109.8 95 55.8
Psat7g187640 Pisum sativum HOM05D006357 ORTHO05D007925 1.3e-22 109.8 94 56.4
Prupe.6G132600 Prunus persica HOM05D006357 ORTHO05D007925 1.3e-22 109.8 93 55.9
FAN25G2095 Fragaria x ananassa HOM05D006357 ORTHO05D007925 1.6e-22 109.4 95 55.8
Lalb_Chr03g0028161 Lupinus albus HOM05D006357 ORTHO05D007925 1.6e-22 109.4 90 57.8
QL01p012073 Quercus lobata HOM05D006357 ORTHO05D007925 1.6e-22 109.4 93 55.9
Ca_26666_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 2.1e-22 109.0 94 55.3
AT3G44380 Arabidopsis thaliana HOM05D006357 ORTHO05D007925 3.6e-22 108.2 95 54.7
BcaC01g02047 Brassica carinata HOM05D006357 ORTHO05D007925 3.6e-22 108.2 95 53.7
C03p69190 Brassica napus HOM05D006357 ORTHO05D007925 3.6e-22 108.2 95 53.7
BolC3t19173H Brassica oleracea HOM05D006357 ORTHO05D007925 3.6e-22 108.2 95 53.7
Os08g0558300 Oryza sativa ssp. japonica HOM05D006357 ORTHO05D007925 3.6e-22 108.2 95 51.6
Ca_19414_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 6.2e-22 107.5 94 55.3
Potri.001G218400 Populus trichocarpa HOM05D006357 ORTHO05D007925 1.1e-21 106.7 96 53.1
FAN11G2870 Fragaria x ananassa HOM05D006357 ORTHO05D007925 1.4e-21 106.3 83 59.0
PGR102G0344 Punica granatum HOM05D006357 ORTHO05D007925 2.4e-21 105.5 93 53.8
QL01p012091 Quercus lobata HOM05D006357 ORTHO05D007925 2.4e-21 105.5 93 54.8
Sabra16G0125700 Salix brachista HOM05D006357 ORTHO05D007925 2.4e-21 105.5 96 54.2
AL5G22540 Arabidopsis lyrata HOM05D006357 ORTHO05D007925 5.3e-21 104.4 95 53.7
Nn6g34849 Nelumbo nucifera HOM05D006357 ORTHO05D007925 1.2e-20 103.2 92 47.8
MD11G1166600 Malus domestica HOM05D006357 ORTHO05D007925 3.4e-20 101.7 93 49.5
DCAR_006168 Daucus carota HOM05D006357 ORTHO05D007925 4.5e-20 101.3 90 52.2
Haze_23361 Corylus avellana HOM05D006357 ORTHO05D007925 7.6e-20 100.5 81 59.3
Aqoxy4G02740 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 9.9e-20 100.1 95 50.5
PSO339G1489 Papaver somniferum HOM05D006357 ORTHO05D007925 4.9e-19 97.8 94 52.1
PSO384G0917 Papaver somniferum HOM05D006357 ORTHO05D007925 6.4e-19 97.4 94 52.1
Dinv42541 Davidia involucrata HOM05D006357 ORTHO05D007925 1.1e-18 96.7 81 58.0
SMO347G0335 Selaginella moellendorffii HOM05D006357 ORTHO05D007925 7.9e-17 90.5 91 45.1
ATR0820G064 Amborella trichopoda HOM05D006357 ORTHO05D007925 1.3e-14 83.2 91 42.9
Mapoly0079s0020 Marchantia polymorpha HOM05D006357 ORTHO05D007925 8.1e-14 80.5 91 39.6
Pp3c2_16750 Physcomitrium patens HOM05D006357 ORTHO05D007925 8.1e-14 80.5 91 42.9
ATR0820G202 Amborella trichopoda HOM05D006357 ORTHO05D007925 2.4e-13 79.0 91 42.9
SEGI_40876 Sequoiadendron giganteum HOM05D006357 ORTHO05D007925 1.5e-12 76.3 91 40.7
AagrBONN_evm.TU.Sc2ySwM_117.3687 Anthoceros agrestis HOM05D006357 ORTHO05D007925 1.7e-11 72.8 91 38.5
AUR62044742 Chenopodium quinoa HOM05D006357 ORTHO05D007925 1.6e-09 66.2 62 54.8
AUR62036201 Chenopodium quinoa HOM05D006357 ORTHO05D007925 2.1e-09 65.9 60 55.0
ECA248G3754 Erigeron canadensis HOM05D006357 ORTHO05D007925 1.0e-08 63.5 56 53.6
Pp3c21_10640 Physcomitrium patens HOM05D006357 ORTHO05D007925 1.3e-08 63.2 90 36.7
Pp3c9_9450 Physcomitrium patens HOM05D006357 ORTHO05D007925 3.0e-08 62.0 91 35.2
ATR0820G128 Amborella trichopoda HOM05D006357 ORTHO05D007925 8.7e-08 60.5 66 47.0


User provided reference genes

Program Settings