Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 3.4e-138 495.0 245 100.0
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 4.3e-133 478.0 244 96.7
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 1.1e-104 383.6 245 79.2
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 1.4e-99 366.7 249 76.7
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 1.2e-90 337.0 244 71.3
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 2.6e-82 309.3 239 66.9
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 3.8e-65 252.3 253 56.9
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 1.5e-61 240.4 252 54.0
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 2.0e-61 240.0 252 54.0
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 8.3e-60 234.6 238 54.2
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 1.4e-59 233.8 247 53.8
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 2.4e-59 233.0 255 52.5
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 2.4e-59 233.0 249 52.2
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 2.4e-59 233.0 242 53.7
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 3.1e-59 232.6 255 52.5
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 4.1e-59 232.3 242 54.5
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 9.1e-59 231.1 241 53.1
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 2.0e-58 229.9 250 52.0
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 2.0e-58 229.9 242 54.1
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 4.5e-58 228.8 255 51.8
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 1.3e-57 227.3 258 51.2
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 1.7e-57 226.9 241 53.5
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 3.8e-57 225.7 248 51.6
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 1.5e-56 223.8 244 52.9
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 1.9e-56 223.4 253 49.8
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 1.9e-56 223.4 237 53.2
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 3.2e-56 222.6 242 52.1
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 4.2e-56 222.2 251 51.0
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 4.2e-56 222.2 237 53.2
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 4.2e-56 222.2 170 64.1
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 9.5e-56 221.1 246 52.4
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.2e-55 220.7 243 51.9
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 1.6e-55 220.3 250 51.6
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 2.1e-55 219.9 247 50.6
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 2.1e-55 219.9 245 51.8
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 2.1e-55 219.9 221 56.1
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 2.1e-55 219.9 223 53.4
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 6.1e-55 218.4 215 54.9
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 8.0e-55 218.0 250 49.6
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 3.0e-54 216.1 189 56.6
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 3.0e-54 216.1 219 54.8
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 3.0e-54 216.1 245 50.6
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 5.2e-54 215.3 150 68.7
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 8.8e-54 214.5 251 51.4
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 8.8e-54 214.5 240 51.7
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 4.4e-53 212.2 221 55.2
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 5.7e-53 211.8 240 49.2
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 9.8e-53 211.1 227 52.4
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 2.8e-52 209.5 273 48.4
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 3.7e-52 209.1 238 50.4
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.1e-51 207.6 273 46.2
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 1.1e-51 207.6 198 54.0
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 2.4e-51 206.5 198 53.5
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 3.1e-51 206.1 174 60.9
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 3.1e-51 206.1 174 60.9
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 4.1e-51 205.7 237 46.4
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 4.1e-51 205.7 184 56.0
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 4.1e-51 205.7 254 49.2
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 5.4e-51 205.3 244 48.8
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 9.2e-51 204.5 168 61.9
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 1.6e-50 203.8 241 50.6
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 2.0e-50 203.4 234 49.1
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 2.7e-50 203.0 216 51.9
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 3.5e-50 202.6 153 63.4
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 1.3e-49 200.7 176 58.5
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 1.7e-49 200.3 238 49.6
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 2.3e-49 199.9 247 47.8
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 3.8e-49 199.1 247 51.8
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 5.0e-49 198.7 246 45.5
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 6.6e-49 198.4 245 48.6
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 8.6e-49 198.0 241 50.2
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 2.8e-47 193.0 198 55.6
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 3.6e-47 192.6 149 62.4
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 8.0e-47 191.4 203 56.2
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 1.0e-46 191.0 203 54.2
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 1.0e-46 191.0 204 54.4
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 1.4e-46 190.7 203 53.7
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 2.3e-46 189.9 245 45.7
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 4.0e-46 189.1 138 63.0
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 5.2e-46 188.7 245 48.6
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 8.9e-46 188.0 186 53.2
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 2.2e-44 183.3 202 53.5
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 2.9e-44 183.0 247 47.0
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 3.7e-44 182.6 180 51.7
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 6.4e-44 181.8 211 52.1
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 8.3e-44 181.4 216 50.5
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 1.4e-43 180.6 218 50.0
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 1.8e-43 180.3 184 48.9
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 1.6e-42 177.2 252 47.6
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 2.0e-42 176.8 259 44.4
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 5.9e-42 175.3 159 54.7
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 1.1e-40 171.0 248 44.4
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 2.8e-39 166.4 226 42.0
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 1.4e-38 164.1 194 47.4
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 1.8e-38 163.7 241 44.4
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 2.0e-37 160.2 97 72.2
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 4.4e-37 159.1 113 64.6
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 1.3e-36 157.5 110 65.5
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 3.2e-35 152.9 216 38.9
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 2.7e-34 149.8 238 41.6
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 1.0e-33 147.9 86 75.6
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 4.7e-31 139.0 209 37.3
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 1.3e-28 131.0 151 47.0
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 1.6e-26 124.0 80 65.0
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 2.6e-21 106.7 214 34.6
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 1.7e-20 104.0 228 30.3
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 2.4e-19 100.1 56 80.4
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 7.1e-19 98.6 114 48.2
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 2.1e-18 97.1 83 51.8
Duzib213G0106 Durio zibethinus HOM05D006259 ORTHO05D007804 8.7e-17 91.7 119 42.9
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 1.1e-16 91.3 158 34.8
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 1.5e-13 80.9 103 36.9
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 1.4e-06 57.8 83 37.3


User provided reference genes

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