Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62036164 Chenopodium quinoa HOM05D007892 ORTHO05D009211 8.7e-282 973.4 657 100.0
AUR62019468 Chenopodium quinoa HOM05D007892 ORTHO05D009211 3.2e-207 725.7 659 71.2
EL10Ac4g08232 Beta vulgaris HOM05D007892 ORTHO05D009211 2.0e-100 370.9 652 48.9
Ah.06g184550 Amaranthus hybridus HOM05D007892 ORTHO05D009211 5.0e-96 356.3 432 52.5
Hund22811 Selenicereus undatus HOM05D007892 ORTHO05D009211 8.4e-51 206.1 433 37.9
Dinv20199 Davidia involucrata HOM05D007892 ORTHO05D009211 1.5e-31 142.1 450 32.4
Duzib213G0678 Durio zibethinus HOM05D007892 ORTHO05D009211 3.3e-31 141.0 480 30.8
Ciclev10007798m.g Citrus clementina HOM05D007892 ORTHO05D009211 9.7e-31 139.4 437 30.9
COL.COLO4_36713 Corchorus olitorius HOM05D007892 ORTHO05D009211 1.7e-30 138.7 485 30.5
Cfa020559 Carpinus fangiana HOM05D007892 ORTHO05D009211 4.8e-30 137.1 446 31.2
Haze_09454 Corylus avellana HOM05D007892 ORTHO05D009211 8.2e-30 136.3 448 32.6
Gohir.D01G048000 Gossypium hirsutum HOM05D007892 ORTHO05D009211 1.4e-29 135.6 468 32.1
Sc03g0010140 Simmondsia chinensis HOM05D007892 ORTHO05D009211 3.1e-29 134.4 424 33.0
CSS0030192 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 4.1e-29 134.0 446 32.1
Manes.15G089300 Manihot esculenta HOM05D007892 ORTHO05D009211 4.1e-29 134.0 462 30.3
Thecc.07G095700 Theobroma cacao HOM05D007892 ORTHO05D009211 7.0e-29 133.3 590 29.3
FAN21G3246 Fragaria x ananassa HOM05D007892 ORTHO05D009211 1.5e-28 132.1 434 33.6
MD03G1231500 Malus domestica HOM05D007892 ORTHO05D009211 2.0e-28 131.7 449 31.4
CSS0005747 Camellia sinensis var. sinensis HOM05D007892 ORTHO05D009211 5.9e-28 130.2 446 31.8
CANSAT56G4073 Cannabis sativa HOM05D007892 ORTHO05D009211 5.9e-28 130.2 450 31.8
Gohir.A01G061400 Gossypium hirsutum HOM05D007892 ORTHO05D009211 1.0e-27 129.4 467 32.5
FAN16G1540 Fragaria x ananassa HOM05D007892 ORTHO05D009211 1.3e-27 129.0 433 32.6
GSVIVG01014294001 Vitis vinifera HOM05D007892 ORTHO05D009211 1.7e-27 128.6 453 31.1
FAN25G2763 Fragaria x ananassa HOM05D007892 ORTHO05D009211 2.9e-27 127.9 441 32.0
Gorai.002G067800 Gossypium raimondii HOM05D007892 ORTHO05D009211 1.4e-26 125.6 468 31.6
QL08p022727 Quercus lobata HOM05D007892 ORTHO05D009211 1.4e-26 125.6 488 29.5
CiPaw.11G172000 Carya illinoinensis HOM05D007892 ORTHO05D009211 1.9e-26 125.2 454 30.0
TWI38G1391 Tripterygium wilfordii HOM05D007892 ORTHO05D009211 7.2e-26 123.2 449 30.7
Rhsim06G0202400 Rhododendron simsii HOM05D007892 ORTHO05D009211 1.6e-25 122.1 446 31.2
Duzib244G0002 Durio zibethinus HOM05D007892 ORTHO05D009211 2.7e-25 121.3 554 30.0
FvH4_3g19480 Fragaria vesca HOM05D007892 ORTHO05D009211 2.7e-25 121.3 440 31.1
RcHm_v2.0_Chr5g0032741 Rosa chinensis HOM05D007892 ORTHO05D009211 3.6e-25 120.9 437 31.4
FAN11G1893 Fragaria x ananassa HOM05D007892 ORTHO05D009211 1.8e-24 118.6 426 30.0
Duzib268G0896 Durio zibethinus HOM05D007892 ORTHO05D009211 8.8e-24 116.3 551 29.4
Prupe.4G176400 Prunus persica HOM05D007892 ORTHO05D009211 3.3e-23 114.4 470 28.9
TAR626G1218 Trochodendron aralioides HOM05D007892 ORTHO05D009211 9.7e-23 112.8 510 29.2
Lalb_Chr01g0016751 Lupinus albus HOM05D007892 ORTHO05D009211 1.4e-21 109.0 511 29.0
Glyma.12G226900 Glycine max HOM05D007892 ORTHO05D009211 1.8e-21 108.6 434 30.0
Lj3g0007189 Lotus japonicus HOM05D007892 ORTHO05D009211 2.4e-21 108.2 497 29.2
DCAR_019569 Daucus carota HOM05D007892 ORTHO05D009211 2.0e-20 105.1 431 29.7
Medtr2g078660 Medicago truncatula HOM05D007892 ORTHO05D009211 2.6e-20 104.8 497 28.8
Cc05_g11770 Coffea canephora HOM05D007892 ORTHO05D009211 1.0e-19 102.8 447 29.5
Sed0012696 Sechium edule HOM05D007892 ORTHO05D009211 2.2e-19 101.7 449 28.7
Ca_03530_v3 Cicer arietinum L. HOM05D007892 ORTHO05D009211 2.9e-19 101.3 503 28.0
MSTRG.6820 Avicennia marina HOM05D007892 ORTHO05D009211 1.5e-18 99.0 424 30.2
Aqoxy1G02331 Aquilegia oxysepala HOM05D007892 ORTHO05D009211 4.2e-18 97.4 537 27.7
CsaV3_4G033500 Cucumis sativus L. HOM05D007892 ORTHO05D009211 2.1e-17 95.1 443 28.7
vmacro11887 Vaccinium macrocarpon HOM05D007892 ORTHO05D009211 2.7e-17 94.7 439 28.9
Dinv14936 Davidia involucrata HOM05D007892 ORTHO05D009211 3.6e-17 94.4 426 26.8
HanXRQChr11g0351991 Helianthus annuus HOM05D007892 ORTHO05D009211 1.4e-16 92.4 436 30.0
Eucgr.F01161 Eucalyptus grandis HOM05D007892 ORTHO05D009211 1.8e-16 92.0 463 29.8
Potri.011G115900 Populus trichocarpa HOM05D007892 ORTHO05D009211 2.3e-16 91.7 483 27.1
Lj1A840G45 Lonicera japonica HOM05D007892 ORTHO05D009211 4.0e-16 90.9 471 28.0
VMungo0331G1677 Vigna mungo HOM05D007892 ORTHO05D009211 4.0e-16 90.9 442 27.8
Oeu037370.2 Olea europaea HOM05D007892 ORTHO05D009211 8.8e-16 89.7 445 26.1
ClCG11G017870 Citrullus lanatus HOM05D007892 ORTHO05D009211 1.2e-15 89.4 456 27.0
Nn1g06449 Nelumbo nucifera HOM05D007892 ORTHO05D009211 5.7e-15 87.0 421 27.6
Phvul.010G112300 Phaseolus vulgaris HOM05D007892 ORTHO05D009211 1.3e-14 85.9 447 28.6
arahy.Tifrunner.gnm1.ann1.8Q202K Arachis hypogaea HOM05D007892 ORTHO05D009211 2.4e-13 81.6 503 26.0
MD11G1252600 Malus domestica HOM05D007892 ORTHO05D009211 3.1e-13 81.3 444 27.3
Sabra11G0101600 Salix brachista HOM05D007892 ORTHO05D009211 3.1e-13 81.3 510 27.1
Atru.chr2.2419 Acer truncatum HOM05D007892 ORTHO05D009211 1.2e-12 79.3 361 28.0
Potri.001G397001 Populus trichocarpa HOM05D007892 ORTHO05D009211 3.5e-12 77.8 451 25.7
Solyc07g062920.4 Solanum lycopersicum HOM05D021138 ORTHO05D009211 7.7e-12 76.6 440 27.0
Actinidia09702 Actinidia chinensis HOM05D007892 ORTHO05D009211 1.3e-11 75.9 435 26.7
BcaC03g14367 Brassica carinata HOM05D012500 ORTHO05D009211 1.7e-11 75.5 317 30.0
ECA236G4021 Erigeron canadensis HOM05D000553 ORTHO05D009211 1.7e-11 75.5 64 62.5
Lsat_1_v5_gn_7_104640 Lactuca sativa HOM05D007892 ORTHO05D009211 2.2e-11 75.1 421 26.4
TPR.G7948 Trifolium pratense HOM05D007892 ORTHO05D009211 1.1e-10 72.8 62 62.9
Sopen07g031110 Solanum pennellii HOM05D021138 ORTHO05D009211 1.5e-10 72.4 445 26.7
unitig_37.g12567 Utricularia gibba HOM05D007892 ORTHO05D009211 1.5e-10 72.4 60 63.3
A02p10690 Brassica napus HOM05D012500 ORTHO05D009211 5.5e-10 70.5 281 31.3
PGSC0003DMG403012406 Solanum tuberosum HOM05D021138 ORTHO05D009211 1.2e-09 69.3 443 26.4
CDE05G2993 Ceratophyllum demersum HOM05D007892 ORTHO05D009211 1.6e-09 68.9 176 38.1
MELO3C025606.2 Cucumis melo HOM05D007892 ORTHO05D009211 3.6e-09 67.8 448 25.0
arahy.Tifrunner.gnm1.ann1.N2Q107 Arachis hypogaea HOM05D007892 ORTHO05D009211 6.1e-09 67.0 94 43.6
C02p17810 Brassica napus HOM05D012500 ORTHO05D009211 8.0e-09 66.6 316 29.1
BolC2t07910H Brassica oleracea HOM05D012500 ORTHO05D009211 8.0e-09 66.6 289 29.1
THA.LOC104799933 Tarenaya hassleriana HOM05D012500 ORTHO05D009211 1.4e-08 65.9 63 60.3
PSO541G2379 Papaver somniferum HOM05D056025 ORTHO05D009211 3.0e-08 64.7 63 57.1
PSO675G5502 Papaver somniferum HOM05D056025 ORTHO05D009211 3.0e-08 64.7 89 48.3
Glyma.13G273900 Glycine max HOM05D007892 ORTHO05D009211 4.0e-08 64.3 422 26.1
BraA02t06132Z Brassica rapa HOM05D012500 ORTHO05D009211 5.2e-08 63.9 178 36.0
Migut.M00782 Erythranthe guttata HOM05D007892 ORTHO05D009211 5.2e-08 63.9 194 31.4
Sp6g16010 Schrenkiella parvula HOM05D012500 ORTHO05D009211 2.2e-06 58.5 34 85.3


User provided reference genes

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