Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62036161 Chenopodium quinoa HOM05D006014 ORTHO05D007608 5.8e-90 334.3 184 100.0
AUR62019472 Chenopodium quinoa HOM05D006014 ORTHO05D007608 5.4e-88 327.8 184 98.4
EL10Ac4g08237 Beta vulgaris HOM05D006014 ORTHO05D007608 4.7e-76 288.1 186 86.6
Ah.06g184580 Amaranthus hybridus HOM05D006014 ORTHO05D007608 1.7e-70 269.6 178 83.1
Sc03g0010200 Simmondsia chinensis HOM05D006014 ORTHO05D007608 3.3e-53 212.2 186 68.3
Hund04492 Selenicereus undatus HOM05D006014 ORTHO05D007608 4.8e-52 208.4 186 66.1
Potri.001G396600 Populus trichocarpa HOM05D006014 ORTHO05D007608 1.2e-50 203.8 174 66.1
Sabra16G0259700 Salix brachista HOM05D006014 ORTHO05D007608 2.0e-50 203.0 171 65.5
QL08p024005 Quercus lobata HOM05D006014 ORTHO05D007608 2.4e-48 196.1 182 65.4
Ciclev10009636m.g Citrus clementina HOM05D006014 ORTHO05D007608 3.2e-48 195.7 176 64.8
Dinv14938 Davidia involucrata HOM05D006014 ORTHO05D007608 5.4e-48 194.9 185 62.7
Gohir.D05G347800 Gossypium hirsutum HOM05D006014 ORTHO05D007608 7.1e-48 194.5 185 64.3
Manes.15G089600 Manihot esculenta HOM05D006014 ORTHO05D007608 7.1e-48 194.5 184 63.0
Gorai.009G375600 Gossypium raimondii HOM05D006014 ORTHO05D007608 1.2e-47 193.7 184 63.6
CsaV3_4G033460 Cucumis sativus L. HOM05D006014 ORTHO05D007608 2.7e-47 192.6 178 64.6
Gohir.A04G035600 Gossypium hirsutum HOM05D006014 ORTHO05D007608 3.5e-47 192.2 184 63.0
MELO3C025609.2 Cucumis melo HOM05D006014 ORTHO05D007608 6.0e-47 191.4 178 64.0
Phvul.011G162800 Phaseolus vulgaris HOM05D006014 ORTHO05D007608 1.8e-46 189.9 171 64.9
CSS0037767 Camellia sinensis var. sinensis HOM05D006014 ORTHO05D007608 2.3e-46 189.5 176 64.8
COL.COLO4_03477 Corchorus olitorius HOM05D006014 ORTHO05D007608 3.0e-46 189.1 191 62.3
Thecc.07G096300 Theobroma cacao HOM05D006014 ORTHO05D007608 3.9e-46 188.7 189 60.3
ClCG11G017820 Citrullus lanatus HOM05D006014 ORTHO05D007608 8.7e-46 187.6 178 62.9
Duzib170G0605 Durio zibethinus HOM05D006014 ORTHO05D007608 8.7e-46 187.6 191 60.7
Nitab4.5_0003033g0060 Nicotiana tabacum HOM05D006014 ORTHO05D007608 8.7e-46 187.6 174 64.4
Nitab4.5_0013317g0010 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.1e-45 187.2 181 64.1
Peaxi162Scf00069g01737 Petunia axillaris HOM05D006014 ORTHO05D007608 3.3e-45 185.7 175 63.4
Sed0004006 Sechium edule HOM05D006014 ORTHO05D007608 4.3e-45 185.3 173 64.2
Solyc07g062870.3 Solanum lycopersicum HOM05D006014 ORTHO05D007608 4.3e-45 185.3 176 63.6
Sopen07g031070 Solanum pennellii HOM05D006014 ORTHO05D007608 4.3e-45 185.3 176 63.6
TAR626G1430 Trochodendron aralioides HOM05D006014 ORTHO05D007608 5.6e-45 184.9 180 63.9
FAN21G0470 Fragaria x ananassa HOM05D006014 ORTHO05D007608 9.6e-45 184.1 186 61.3
FvH4_3g19430 Fragaria vesca HOM05D006014 ORTHO05D007608 2.1e-44 183.0 186 60.8
FAN11G2300 Fragaria x ananassa HOM05D006014 ORTHO05D007608 2.1e-44 183.0 186 60.8
Lj3g0022855 Lotus japonicus HOM05D006014 ORTHO05D007608 2.8e-44 182.6 172 62.8
Haze_09409 Corylus avellana HOM05D005607 ORTHO05D008142 6.2e-44 181.4 147 70.1
FAN25G0078 Fragaria x ananassa HOM05D006014 ORTHO05D007608 8.1e-44 181.0 186 60.2
Cc05_g11740 Coffea canephora HOM05D006014 ORTHO05D007608 1.1e-43 180.6 179 61.5
CiPaw.11G167800 Carya illinoinensis HOM05D006014 ORTHO05D007608 2.4e-43 179.5 147 68.0
RcHm_v2.0_Chr5g0032711 Rosa chinensis HOM05D006014 ORTHO05D007608 2.4e-43 179.5 184 60.3
Lsat_1_v5_gn_5_128220 Lactuca sativa HOM05D006014 ORTHO05D007608 3.1e-43 179.1 185 60.5
VMungo1127G0848 Vigna mungo HOM05D006014 ORTHO05D007608 3.1e-43 179.1 174 61.5
DCAR_019570 Daucus carota HOM05D006014 ORTHO05D007608 4.0e-43 178.7 184 59.2
HanXRQChr10g0302621 Helianthus annuus HOM05D006014 ORTHO05D007608 5.3e-43 178.3 182 59.3
GSVIVG01014290001 Vitis vinifera HOM05D006014 ORTHO05D007608 6.9e-43 177.9 184 59.2
CDE10G1292 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 9.0e-43 177.6 175 62.3
CDE10G0058 Ceratophyllum demersum HOM05D006014 ORTHO05D007608 1.2e-42 177.2 173 63.0
SalBow8G3070 Salvia bowleyana HOM05D006014 ORTHO05D007608 1.2e-42 177.2 182 61.0
PGSC0003DMG400012405 Solanum tuberosum HOM05D006014 ORTHO05D007608 1.2e-42 177.2 176 61.9
Nn1g04203 Nelumbo nucifera HOM05D006014 ORTHO05D007608 2.6e-42 176.0 178 61.2
PGR083G0398 Punica granatum HOM05D006014 ORTHO05D007608 2.6e-42 176.0 176 60.8
Eucgr.F01167 Eucalyptus grandis HOM05D006014 ORTHO05D007608 3.4e-42 175.6 182 61.0
Prupe.4G176000 Prunus persica HOM05D006014 ORTHO05D007608 3.4e-42 175.6 183 60.7
Glyma.06G236200 Glycine max HOM05D006014 ORTHO05D007608 5.8e-42 174.9 175 64.0
MD03G1232600 Malus domestica HOM05D006014 ORTHO05D007608 7.6e-42 174.5 176 60.2
Migut.H01957 Erythranthe guttata HOM05D006014 ORTHO05D007608 1.0e-41 174.1 186 60.2
Glyma.12G162300 Glycine max HOM05D006014 ORTHO05D007608 1.0e-41 174.1 175 62.9
Hma1.2p1_1411F.1_g281760 Hydrangea macrophylla HOM05D006014 ORTHO05D007608 1.0e-41 174.1 182 61.0
CANSAT35G1465 Cannabis sativa HOM05D006014 ORTHO05D007608 1.3e-41 173.7 182 59.9
TPR.G28172 Trifolium pratense HOM05D006014 ORTHO05D007608 1.3e-41 173.7 175 62.3
TWI38G2086 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 1.7e-41 173.3 180 57.8
MSTRG.12894 Avicennia marina HOM05D006014 ORTHO05D007608 2.9e-41 172.6 182 60.4
Psat4g136440 Pisum sativum HOM05D006014 ORTHO05D007608 8.4e-41 171.0 173 59.0
Lalb_Chr07g0182891 Lupinus albus HOM05D006014 ORTHO05D007608 1.1e-40 170.6 184 57.1
MD11G1253300 Malus domestica HOM05D006014 ORTHO05D007608 1.1e-40 170.6 170 61.8
TAR624G0768 Trochodendron aralioides HOM05D006014 ORTHO05D007608 1.1e-40 170.6 161 64.0
PSO675G1148 Papaver somniferum HOM05D006014 ORTHO05D007608 3.2e-40 169.1 182 58.2
Ca_23028_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 7.1e-40 167.9 171 60.8
Ca_23030_v3 Cicer arietinum L. HOM05D006014 ORTHO05D007608 7.1e-40 167.9 171 60.8
PSO541G1420 Papaver somniferum HOM05D006014 ORTHO05D007608 7.1e-40 167.9 182 58.2
Medtr8g061350 Medicago truncatula HOM05D006014 ORTHO05D007608 1.6e-39 166.8 174 59.8
Nitab4.5_0002330g0100 Nicotiana tabacum HOM05D006014 ORTHO05D007608 6.0e-39 164.9 197 56.3
Oeu037371.1 Olea europaea HOM05D006014 ORTHO05D007608 1.0e-38 164.1 168 60.1
ATR0737G141 Amborella trichopoda HOM05D006014 ORTHO05D007608 5.1e-38 161.8 114 71.9
Oeu051088.1 Olea europaea HOM05D006014 ORTHO05D007608 5.1e-38 161.8 178 57.9
arahy.Tifrunner.gnm1.ann1.FY4UJ9 Arachis hypogaea HOM05D006014 ORTHO05D007608 8.7e-38 161.0 223 49.8
ECA234G0345 Erigeron canadensis HOM05D006014 ORTHO05D007608 1.1e-37 160.6 180 56.1
Rhsim04G0022600 Rhododendron simsii HOM05D006014 ORTHO05D007608 1.5e-37 160.2 184 57.6
Nitab4.5_0000332g0180 Nicotiana tabacum HOM05D006014 ORTHO05D007608 1.9e-37 159.8 176 60.2
THA.LOC104815561 Tarenaya hassleriana HOM05D006014 ORTHO05D007608 4.3e-37 158.7 188 54.8
BolC1t04895H Brassica oleracea HOM05D006014 ORTHO05D007608 7.4e-37 157.9 191 55.0
C01p49380 Brassica napus HOM05D006014 ORTHO05D007608 2.8e-36 156.0 190 54.7
Cfa020606 Carpinus fangiana HOM05D006014 ORTHO05D007608 4.8e-36 155.2 115 74.8
A01p38830 Brassica napus HOM05D006014 ORTHO05D007608 8.2e-36 154.5 188 54.8
BraA01t03929Z Brassica rapa HOM05D006014 ORTHO05D007608 8.2e-36 154.5 188 54.8
A03p39200 Brassica napus HOM05D006014 ORTHO05D007608 1.4e-35 153.7 190 54.2
Aqoxy1G02326 Aquilegia oxysepala HOM05D006014 ORTHO05D007608 1.8e-35 153.3 181 55.2
BcaB04g20944 Brassica carinata HOM05D006014 ORTHO05D007608 2.4e-35 152.9 191 53.9
BraA03t13069Z Brassica rapa HOM05D006014 ORTHO05D007608 2.4e-35 152.9 190 54.2
Sed0026173 Sechium edule HOM05D006014 ORTHO05D007608 1.2e-34 150.6 173 56.1
BcaC01g03887 Brassica carinata HOM05D006014 ORTHO05D007608 1.5e-34 150.2 114 68.4
C03p47570 Brassica napus HOM05D006014 ORTHO05D007608 1.5e-34 150.2 114 68.4
MBI07_g30170_MAGBIO Magnolia biondii HOM05D006014 ORTHO05D007608 1.5e-34 150.2 188 55.9
BolC3t17032H Brassica oleracea HOM05D006014 ORTHO05D007608 2.0e-34 149.8 114 68.4
Aa31LG8G2390 Aethionema arabicum HOM05D006014 ORTHO05D007608 3.4e-34 149.1 119 63.0
Actinidia35240 Actinidia chinensis HOM05D006014 ORTHO05D007608 4.5e-34 148.7 108 74.1
CARHR090180 Cardamine hirsuta HOM05D006014 ORTHO05D007608 4.5e-34 148.7 189 54.0
A05p34280 Brassica napus HOM05D006014 ORTHO05D007608 7.6e-34 147.9 147 59.9
BraA05t22249Z Brassica rapa HOM05D006014 ORTHO05D007608 7.6e-34 147.9 147 59.9
Sp3g13400 Schrenkiella parvula HOM05D006014 ORTHO05D007608 1.3e-33 147.1 194 53.1
BcaB06g29543 Brassica carinata HOM05D006014 ORTHO05D007608 6.5e-33 144.8 158 57.0
C05p52040 Brassica napus HOM05D006014 ORTHO05D007608 6.5e-33 144.8 141 60.3
AL3G27580 Arabidopsis lyrata HOM05D006014 ORTHO05D007608 1.9e-32 143.3 185 53.5
unitig_749.g13531 Utricularia gibba HOM05D005607 ORTHO05D008142 4.2e-32 142.1 178 53.4
AT3G15190 Arabidopsis thaliana HOM05D006014 ORTHO05D007608 5.5e-32 141.7 190 53.2
arahy.Tifrunner.gnm1.ann1.QT5AN8 Arachis hypogaea HOM05D006014 ORTHO05D007608 9.3e-32 141.0 265 40.0
TWI39G1175 Tripterygium wilfordii HOM05D006014 ORTHO05D007608 1.6e-31 140.2 117 65.0
Carub.0003s1484 Capsella rubella HOM05D006014 ORTHO05D007608 3.5e-31 139.0 190 50.0
Thhalv10021521m.g Eutrema salsugineum HOM05D006014 ORTHO05D007608 6.1e-31 138.3 199 49.7
Lj3g0017472 Lotus japonicus HOM05D006014 ORTHO05D007608 1.9e-29 133.3 130 58.5
SEGI_01083 Sequoiadendron giganteum HOM05D006014 ORTHO05D007608 2.5e-29 132.9 171 52.0
Zm00001eb360330 Zea mays HOM05D006014 ORTHO05D007608 4.1e-27 125.6 182 46.2
Os01g0678600 Oryza sativa ssp. japonica HOM05D006014 ORTHO05D007608 1.5e-26 123.6 192 45.8
Mapoly0009s0159 Marchantia polymorpha HOM05D006014 ORTHO05D007608 3.4e-26 122.5 180 44.4
Pp3c24_17080 Physcomitrium patens HOM05D006014 ORTHO05D007608 7.9e-23 111.3 122 54.9
Lj8A154T77 Lonicera japonica HOM05D006014 ORTHO05D007608 1.5e-21 107.1 163 45.4
CBR_g30802 Chara braunii HOM05D006014 ORTHO05D007608 2.5e-21 106.3 102 56.9
Pp3c20_13390 Physcomitrium patens HOM05D006014 ORTHO05D007608 1.3e-20 104.0 179 41.3
vmacro09523 Vaccinium macrocarpon HOM05D006014 ORTHO05D007608 2.8e-20 102.8 76 64.5
SGA_v2.0_scaffold70G23686 Striga asiatica HOM05D006014 ORTHO05D007608 1.8e-19 100.1 354 31.4
AagrBONN_evm.TU.Sc2ySwM_344.3794 Anthoceros agrestis HOM05D006014 ORTHO05D007608 5.3e-19 98.6 185 44.3
CBR_g39307 Chara braunii HOM05D006014 ORTHO05D007608 1.9e-16 90.1 80 57.5
BcaC09g48477 Brassica carinata HOM05D006014 ORTHO05D007608 5.5e-16 88.6 146 47.9
Cre12.g494750 Chlamydomonas reinhardtii HOM05D006014 ORTHO05D007608 6.7e-14 81.6 120 45.8
MCO10G118 Micromonas commoda HOM05D006014 ORTHO05D007608 6.3e-12 75.1 91 45.1
Dinv20203 Davidia involucrata HOM05D006014 ORTHO05D007608 5.3e-11 72.0 109 53.2
Gohir.A13G146850 Gossypium hirsutum HOM05D006014 ORTHO05D007608 9.1e-11 71.2 67 59.7
Cpa.g.sc131.85 Carica papaya HOM05D006014 ORTHO05D007608 3.5e-10 69.3 108 52.8


User provided reference genes

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