Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62036036 Chenopodium quinoa HOM05D006254 ORTHO05D007409 0.0e+00 1692.2 807 100.0
EL10Ac4g08984 Beta vulgaris HOM05D006254 ORTHO05D007409 1.3e-189 667.5 570 60.7
Sc20g0000720 Simmondsia chinensis HOM05D006254 ORTHO05D007409 1.1e-172 611.3 548 56.6
Dinv02479 Davidia involucrata HOM05D006254 ORTHO05D007409 8.0e-160 568.5 539 51.9
QL10p038598 Quercus lobata HOM05D006254 ORTHO05D007409 1.7e-157 560.8 539 51.8
Potri.004G137900 Populus trichocarpa HOM05D006254 ORTHO05D007409 8.2e-157 558.5 542 51.1
Cfa002251 Carpinus fangiana HOM05D006254 ORTHO05D007409 3.1e-156 556.6 538 51.5
CiPaw.04G178100 Carya illinoinensis HOM05D006254 ORTHO05D007409 6.1e-152 542.3 540 49.4
Prupe.6G059200 Prunus persica HOM05D006254 ORTHO05D007409 8.0e-152 542.0 538 50.0
TAR628G1014 Trochodendron aralioides HOM05D006254 ORTHO05D007409 1.8e-151 540.8 538 49.6
Ah.04g163200 Amaranthus hybridus HOM05D006254 ORTHO05D007409 8.8e-151 538.5 538 53.2
GSVIVG01000233001 Vitis vinifera HOM05D003183 ORTHO05D007409 1.5e-150 537.7 540 50.0
ECA248G3109 Erigeron canadensis HOM05D006254 ORTHO05D007409 1.2e-147 528.1 539 49.2
Gohir.D04G040400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 1.2e-147 528.1 521 50.9
MD03G1072300 Malus domestica HOM05D006254 ORTHO05D007409 1.2e-147 528.1 538 48.9
Gohir.A05G375400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 7.7e-147 525.4 543 49.4
HanXRQChr01g0017761 Helianthus annuus HOM05D006254 ORTHO05D007409 1.0e-146 525.0 540 49.3
Cc07_g20930 Coffea canephora HOM05D006254 ORTHO05D007409 5.0e-146 522.7 573 47.6
Gorai.012G045500 Gossypium raimondii HOM05D006254 ORTHO05D007409 5.0e-146 522.7 543 49.4
CANSAT54G2690 Cannabis sativa HOM05D006254 ORTHO05D007409 5.5e-145 519.2 542 48.3
AUR62004819 Chenopodium quinoa HOM05D006254 ORTHO05D007409 1.0e-143 515.0 489 59.9
Lsat_1_v5_gn_1_78401 Lactuca sativa HOM05D006254 ORTHO05D007409 1.3e-141 508.1 554 47.3
MSTRG.23507 Avicennia marina HOM05D006254 ORTHO05D007409 2.2e-141 507.3 540 47.2
FAN21G3787 Fragaria x ananassa HOM05D006254 ORTHO05D007409 4.8e-141 506.1 553 46.5
Oeu011007.1 Olea europaea HOM05D006254 ORTHO05D007409 6.3e-141 505.8 540 46.9
Lalb_Chr12g0202731 Lupinus albus HOM05D006254 ORTHO05D007409 1.8e-140 504.2 536 47.8
PGR119G0951 Punica granatum HOM05D006254 ORTHO05D007409 1.8e-140 504.2 538 47.2
FAN11G0663 Fragaria x ananassa HOM05D006254 ORTHO05D007409 3.1e-140 503.4 553 46.5
FvH4_3g38370 Fragaria vesca HOM05D006254 ORTHO05D007409 4.1e-140 503.1 553 46.5
Ca_17588_v3 Cicer arietinum L. HOM05D006254 ORTHO05D007409 5.4e-140 502.7 533 48.8
CsaV3_4G030320 Cucumis sativus L. HOM05D006254 ORTHO05D007409 1.2e-139 501.5 539 47.9
Eucgr.I00013 Eucalyptus grandis HOM05D006254 ORTHO05D007409 2.7e-139 500.4 539 46.9
PSO017G1045 Papaver somniferum HOM05D006254 ORTHO05D007409 3.5e-139 500.0 540 47.2
MELO3C033099.2 Cucumis melo HOM05D006254 ORTHO05D007409 5.9e-139 499.2 539 47.3
TPR.G12754 Trifolium pratense HOM05D006254 ORTHO05D007409 1.0e-138 498.4 545 47.2
FAN25G1911 Fragaria x ananassa HOM05D006254 ORTHO05D007409 1.3e-138 498.0 552 46.2
arahy.Tifrunner.gnm1.ann1.9169VS Arachis hypogaea HOM05D006254 ORTHO05D007409 3.3e-137 493.4 540 47.2
arahy.Tifrunner.gnm1.ann1.ZNEY68 Arachis hypogaea HOM05D006254 ORTHO05D007409 7.2e-137 492.3 540 46.9
Lj4g0026953 Lotus japonicus HOM05D006254 ORTHO05D007409 2.1e-136 490.7 541 47.5
THA.LOC104803663 Tarenaya hassleriana HOM05D006254 ORTHO05D007409 6.1e-136 489.2 536 46.3
VMungo0251G0787 Vigna mungo HOM05D006254 ORTHO05D007409 1.4e-135 488.0 555 45.8
TWI31G0260 Tripterygium wilfordii HOM05D006254 ORTHO05D007409 3.0e-135 486.9 536 47.2
Medtr8g095410 Medicago truncatula HOM05D006254 ORTHO05D007409 2.6e-134 483.8 535 47.3
Migut.H00776 Erythranthe guttata HOM05D006254 ORTHO05D007409 7.5e-134 482.3 542 45.8
CSS0012450 Camellia sinensis var. sinensis HOM05D006254 ORTHO05D007409 2.2e-133 480.7 335 64.2
Sopen03g020950 Solanum pennellii HOM05D006254 ORTHO05D007409 3.7e-133 479.9 540 45.7
DCAR_009615 Daucus carota HOM05D006254 ORTHO05D007409 4.9e-133 479.6 507 49.5
Solyc03g078230.3 Solanum lycopersicum HOM05D006254 ORTHO05D007409 8.3e-133 478.8 540 45.7
Peaxi162Scf00030g00012 Petunia axillaris HOM05D006254 ORTHO05D007409 2.4e-132 477.2 520 46.3
Manes.12G085200 Manihot esculenta HOM05D006254 ORTHO05D007409 1.6e-131 474.6 332 63.9
Carub.0001s3633 Capsella rubella HOM05D006254 ORTHO05D007409 2.0e-131 474.2 556 44.4
Aqoxy5G02669 Aquilegia oxysepala HOM05D006254 ORTHO05D007409 5.0e-130 469.5 543 44.0
RcHm_v2.0_Chr5g0068971 Rosa chinensis HOM05D006254 ORTHO05D007409 1.6e-128 464.5 552 44.2
CARHR037200 Cardamine hirsuta HOM05D006254 ORTHO05D007409 3.0e-127 460.3 541 42.9
AT1G47570 Arabidopsis thaliana HOM05D006254 ORTHO05D007409 6.8e-127 459.1 559 42.9
A05p09180 Brassica napus HOM05D006254 ORTHO05D007409 8.9e-127 458.8 538 44.1
FAN16G1494 Fragaria x ananassa HOM05D006254 ORTHO05D007409 1.5e-126 458.0 536 44.6
Sp4g18960 Schrenkiella parvula HOM05D006254 ORTHO05D007409 2.6e-126 457.2 555 42.3
BcaB02g09340 Brassica carinata HOM05D006254 ORTHO05D007409 2.2e-125 454.1 541 42.3
BcaB02g09339 Brassica carinata HOM05D006254 ORTHO05D007409 2.9e-125 453.8 541 42.3
BcaC02g11789 Brassica carinata HOM05D006254 ORTHO05D007409 8.3e-125 452.2 538 42.9
C04p11350 Brassica napus HOM05D006254 ORTHO05D007409 8.3e-125 452.2 538 42.9
SGA_v2.0_scaffold54G19570 Striga asiatica HOM05D006254 ORTHO05D007409 1.9e-124 451.1 540 45.7
BolC4t22773H Brassica oleracea HOM05D006254 ORTHO05D007409 7.8e-123 445.7 544 42.5
Psat7g040840 Pisum sativum HOM05D006254 ORTHO05D007409 7.8e-123 445.7 377 55.4
Rhsim09G0131600 Rhododendron simsii HOM05D006254 ORTHO05D007409 1.7e-122 444.5 321 61.7
Phvul.002G279100 Phaseolus vulgaris HOM05D006254 ORTHO05D007409 5.0e-122 443.0 510 45.1
Thhalv10016597m.g Eutrema salsugineum HOM05D006254 ORTHO05D007409 1.1e-121 441.8 540 43.0
Thecc.01G235200 Theobroma cacao HOM05D006254 ORTHO05D007409 3.3e-121 440.3 497 47.5
Ciclev10024761m.g Citrus clementina HOM05D003183 ORTHO05D003697 5.6e-121 439.5 466 48.9
BolC4t22794H Brassica oleracea HOM05D006254 ORTHO05D007409 8.0e-120 435.6 564 40.8
BraA05t19873Z Brassica rapa HOM05D006254 ORTHO05D007409 8.0e-120 435.6 563 40.9
Migut.H00777 Erythranthe guttata HOM05D006254 ORTHO05D007409 1.1e-119 435.3 357 56.3
Nitab4.5_0012738g0010 Nicotiana tabacum HOM05D006254 ORTHO05D007409 1.1e-116 425.2 638 38.6
Zm00001eb200940 Zea mays HOM05D006254 ORTHO05D007409 7.8e-115 419.1 544 41.4
Os11g0175500 Oryza sativa ssp. japonica HOM05D006254 ORTHO05D007409 7.3e-113 412.5 579 39.6
AL1G53850 Arabidopsis lyrata HOM05D006254 ORTHO05D007409 1.1e-111 408.7 354 53.7
Atru.chr4.972 Acer truncatum HOM05D006254 ORTHO05D007409 2.7e-107 394.0 421 48.2
Glyma.05G198100 Glycine max HOM05D006254 ORTHO05D007409 6.0e-107 392.9 480 43.3
HanXRQChr01g0017751 Helianthus annuus HOM05D006254 ORTHO05D007409 6.0e-107 392.9 343 53.4
Sed0010974 Sechium edule HOM05D006254 ORTHO05D007409 1.7e-106 391.3 468 45.9
RcHm_v2.0_Chr2g0157071 Rosa chinensis HOM05D006254 ORTHO05D007409 6.6e-106 389.4 445 45.2
Sabra04G0089300 Salix brachista HOM05D006254 ORTHO05D007409 7.3e-105 386.0 644 36.6
CDE06G2483 Ceratophyllum demersum HOM05D006254 ORTHO05D007409 4.3e-97 360.1 489 40.5
MD11G1077300 Malus domestica HOM05D006254 ORTHO05D007409 5.6e-97 359.8 458 42.4
Hund06901 Selenicereus undatus HOM05D006254 ORTHO05D007409 1.2e-96 358.6 236 67.8
MD11G1078600 Malus domestica HOM05D006254 ORTHO05D007409 2.1e-88 331.3 291 54.0
Actinidia34771 Actinidia chinensis HOM05D000969 ORTHO05D000899 5.8e-86 323.2 219 65.8
HPP92_016136 Vanilla planifolia HOM05D006254 ORTHO05D007409 6.7e-74 283.1 401 40.1
Nitab4.5_0000004g0230 Nicotiana tabacum HOM05D006254 ORTHO05D007409 2.1e-72 278.1 541 33.5
vmacro10394 Vaccinium macrocarpon HOM05D006254 ORTHO05D007409 2.1e-72 278.1 289 49.1
Haze_25433 Corylus avellana HOM05D006254 ORTHO05D007409 4.9e-69 266.9 334 44.3
Aa31LG5G9250 Aethionema arabicum HOM05D006254 ORTHO05D007409 1.0e-66 259.2 265 46.8
Hma1.2p1_0057F.1_g032170 Hydrangea macrophylla HOM05D006254 ORTHO05D007409 1.9e-65 255.0 184 60.3
MD00G1120300 Malus domestica HOM05D006254 ORTHO05D007409 5.0e-61 240.4 224 51.3
Haze_25436 Corylus avellana HOM05D006254 ORTHO05D007409 2.5e-60 238.0 303 43.9
MD11G1077500 Malus domestica HOM05D006254 ORTHO05D007409 7.2e-60 236.5 380 37.4
Mapoly0003s0196 Marchantia polymorpha HOM05D006254 ORTHO05D007409 4.1e-55 220.7 342 35.4
Lj4g0022315 Lotus japonicus HOM05D006254 ORTHO05D007409 5.5e-52 210.3 315 41.3
unitig_65.g29879 Utricularia gibba HOM05D006254 ORTHO05D007409 7.2e-52 209.9 253 43.9
AagrBONN_evm.TU.Sc2ySwM_117.2849 Anthoceros agrestis HOM05D006254 ORTHO05D007409 1.2e-51 209.1 343 33.8
Cpa.g.sc138.23 Carica papaya HOM05D006254 ORTHO05D007409 1.6e-51 208.8 153 59.5
Migut.H00787 Erythranthe guttata HOM05D006254 ORTHO05D007409 1.8e-50 205.3 314 39.8
unitig_62.g23450 Utricularia gibba HOM05D006254 ORTHO05D007409 2.2e-45 188.3 581 27.9
AagrBONN_evm.TU.Sc2ySwM_228.4097 Anthoceros agrestis HOM05D006254 ORTHO05D007409 6.7e-42 176.8 295 34.9
MD00G1120800 Malus domestica HOM05D006254 ORTHO05D007409 2.2e-40 171.8 145 53.1
SEGI_09568 Sequoiadendron giganteum HOM05D006254 ORTHO05D007409 2.2e-40 171.8 233 39.1
MD11G1078400 Malus domestica HOM05D006254 ORTHO05D007409 1.8e-39 168.7 145 52.4
AUR62029786 Chenopodium quinoa HOM05D007611 ORTHO05D009742 9.4e-36 156.4 464 31.5
Haze_25431 Corylus avellana HOM05D006254 ORTHO05D007409 9.4e-36 156.4 244 36.1
Haze_25432 Corylus avellana HOM05D006254 ORTHO05D007409 9.4e-36 156.4 244 36.1
ATR0584G026 Amborella trichopoda HOM05D006254 ORTHO05D007409 1.5e-33 149.1 179 42.5
AUR62035750 Chenopodium quinoa HOM05D007611 ORTHO05D009742 1.6e-27 129.0 260 36.9
AUR62033772 Chenopodium quinoa HOM05D007611 ORTHO05D009742 1.8e-26 125.6 103 63.1
CBR_g38543 Chara braunii HOM05D006254 ORTHO05D007409 3.4e-25 121.3 371 26.7
GSVIVG01038034001 Vitis vinifera HOM05D001605 ORTHO05D007409 4.8e-24 117.5 70 62.9
Actinidia38917 Actinidia chinensis HOM05D006254 ORTHO05D007409 6.3e-24 117.1 122 49.2
RcHm_v2.0_Chr2g0157061 Rosa chinensis HOM05D006254 ORTHO05D007409 6.3e-24 117.1 77 63.6
MD11G1077000 Malus domestica HOM05D006254 ORTHO05D007409 1.4e-23 115.9 105 51.4
Glyma.08G005450 Glycine max HOM05D006254 ORTHO05D007409 1.3e-21 109.4 78 61.5
Duzib264G1273 Durio zibethinus HOM05D006254 ORTHO05D007409 3.8e-21 107.8 65 67.7
MD11G1077800 Malus domestica HOM05D006254 ORTHO05D007409 1.4e-18 99.4 73 57.5
AagrBONN_evm.TU.Sc2ySwM_228.4094 Anthoceros agrestis HOM05D006254 ORTHO05D007409 3.0e-18 98.2 143 34.3
AagrBONN_evm.TU.Sc2ySwM_340.558 Anthoceros agrestis HOM05D002405 ORTHO05D002483 3.2e-15 88.2 141 33.3
Nn1g08418 Nelumbo nucifera HOM05D006254 ORTHO05D007409 1.2e-14 86.3 87 47.1
BolC4t22792H Brassica oleracea HOM05D006254 ORTHO05D007409 2.1e-11 75.5 84 44.0
Actinidia38918 Actinidia chinensis HOM05D006254 ORTHO05D007409 3.6e-11 74.7 42 73.8
ClCG04G002460 Citrullus lanatus HOM05D006254 ORTHO05D007409 1.0e-10 73.2 69 52.2
AUR62025195 Chenopodium quinoa HOM05D007611 ORTHO05D009742 2.3e-10 72.0 233 27.0
AUR62018179 Chenopodium quinoa HOM05D007611 ORTHO05D009742 4.4e-09 67.8 53 60.4
AUR62014251 Chenopodium quinoa HOM05D007611 ORTHO05D009742 9.8e-09 66.6 53 56.6
AUR62018104 Chenopodium quinoa HOM05D007611 ORTHO05D009742 1.7e-08 65.9 54 55.6
AUR62034955 Chenopodium quinoa HOM05D007611 ORTHO05D009742 1.7e-08 65.9 53 52.8
AUR62014161 Chenopodium quinoa HOM05D007611 ORTHO05D000045 2.2e-08 65.5 53 58.5
AUR62003398 Chenopodium quinoa HOM05D007611 ORTHO05D009742 2.9e-08 65.1 53 56.6
AUR62024773 Chenopodium quinoa HOM05D007611 ORTHO05D009742 2.9e-08 65.1 53 54.7
AUR62038207 Chenopodium quinoa HOM05D007611 ORTHO05D009742 2.9e-08 65.1 53 56.6
AUR62038101 Chenopodium quinoa HOM05D007611 ORTHO05D009742 4.9e-08 64.3 53 54.7
AUR62014215 Chenopodium quinoa HOM05D007611 ORTHO05D009742 1.4e-07 62.8 130 35.4
AUR62028460 Chenopodium quinoa HOM05D007611 ORTHO05D009742 1.4e-07 62.8 161 29.8
AUR62001735 Chenopodium quinoa HOM05D007611 ORTHO05D009742 1.9e-07 62.4 53 56.6
AUR62041051 Chenopodium quinoa HOM05D007611 ORTHO05D009742 2.4e-07 62.0 53 52.8
AUR62026719 Chenopodium quinoa HOM05D007611 ORTHO05D009742 3.2e-07 61.6 53 52.8
AUR62034069 Chenopodium quinoa HOM05D007611 ORTHO05D006795 3.2e-07 61.6 53 56.6
PSO170G1462 Papaver somniferum HOM05D006254 ORTHO05D007409 4.1e-07 61.2 75 44.0
AUR62006486 Chenopodium quinoa HOM05D007611 ORTHO05D009742 5.4e-07 60.8 53 52.8
AUR62026246 Chenopodium quinoa HOM05D005713 ORTHO05D138102 5.4e-07 60.8 51 56.9
AUR62027391 Chenopodium quinoa HOM05D007611 ORTHO05D011319 9.2e-07 60.1 47 61.7
AUR62031281 Chenopodium quinoa HOM05D007611 ORTHO05D009742 9.2e-07 60.1 53 52.8
AUR62033877 Chenopodium quinoa HOM05D007611 ORTHO05D009742 9.2e-07 60.1 53 52.8
AUR62015044 Chenopodium quinoa HOM05D007611 ORTHO05D009742 1.2e-06 59.7 53 54.7
AUR62039275 Chenopodium quinoa HOM05D007611 ORTHO05D009742 1.2e-06 59.7 53 50.9
AUR62034181 Chenopodium quinoa HOM05D007611 ORTHO05D009742 2.0e-06 58.9 37 75.7
HanXRQChr02g0035161 Helianthus annuus HOM05D006254 ORTHO05D007409 2.0e-06 58.9 188 24.5
AUR62024086 Chenopodium quinoa HOM05D007611 ORTHO05D009742 2.7e-06 58.5 38 71.1
AUR62028385 Chenopodium quinoa HOM05D007611 ORTHO05D009742 2.7e-06 58.5 51 54.9
AUR62034371 Chenopodium quinoa HOM05D002023 ORTHO05D002049 3.5e-06 58.2 53 50.9
AUR62044045 Chenopodium quinoa HOM05D007611 ORTHO05D009742 7.8e-06 57.0 53 47.2
AUR62044046 Chenopodium quinoa HOM05D007611 ORTHO05D009742 7.8e-06 57.0 53 47.2


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