Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 2.4e-89 332.0 152 100.0
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 2.5e-75 285.4 126 100.0
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 1.0e-63 246.9 202 59.4
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.9e-59 232.6 204 52.5
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 1.3e-58 229.9 204 52.5
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.6e-58 229.6 204 52.0
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 6.3e-58 227.6 204 51.5
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 8.2e-58 227.3 204 51.5
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 4.1e-57 224.9 204 51.5
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 6.9e-57 224.2 204 50.0
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 7.7e-56 220.7 203 49.8
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 1.0e-55 220.3 204 50.5
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 1.7e-55 219.5 124 71.0
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 1.7e-55 219.5 203 50.2
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 2.2e-55 219.2 128 68.8
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 2.9e-55 218.8 204 48.5
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 8.5e-55 217.2 124 69.4
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 4.2e-54 214.9 167 58.7
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 6.1e-53 211.1 122 68.0
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 1.0e-52 210.3 205 48.8
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.8e-52 209.5 124 69.4
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 1.8e-52 209.5 202 49.5
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 1.8e-52 209.5 201 47.3
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 8.8e-52 207.2 124 68.5
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 1.5e-51 206.5 123 69.9
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 3.3e-51 205.3 201 48.8
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 9.7e-51 203.8 124 66.1
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 1.3e-50 203.4 204 49.0
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 1.3e-50 203.4 204 47.1
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 1.7e-50 203.0 121 66.9
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 1.7e-50 203.0 132 64.4
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 2.2e-50 202.6 118 72.0
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 6.3e-50 201.1 123 67.5
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 6.3e-50 201.1 124 68.5
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 6.3e-50 201.1 209 45.9
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 1.4e-49 199.9 201 47.3
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 1.8e-49 199.5 127 63.8
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 2.4e-49 199.1 200 48.0
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 3.1e-49 198.7 216 44.9
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 3.1e-49 198.7 124 65.3
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 9.1e-49 197.2 130 63.1
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 1.5e-48 196.4 204 45.1
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 3.4e-48 195.3 205 45.4
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 1.0e-47 193.7 130 62.3
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 2.2e-47 192.6 130 63.1
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 6.5e-47 191.0 183 50.3
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 8.5e-47 190.7 150 60.0
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 3.2e-46 188.7 128 60.2
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 4.2e-46 188.3 123 63.4
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 1.2e-45 186.8 124 59.7
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 3.6e-45 185.3 120 65.8
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 1.8e-44 183.0 106 68.9
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 2.3e-44 182.6 124 61.3
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 3.9e-44 181.8 181 49.7
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 3.9e-44 181.8 111 64.0
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 5.2e-44 181.4 123 58.5
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 1.3e-42 176.8 107 69.2
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 1.8e-41 172.9 103 68.0
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 3.1e-41 172.2 109 67.0
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 1.9e-38 162.9 133 52.6
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 6.1e-37 157.9 103 63.1
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 1.2e-35 153.7 98 62.2
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 1.5e-35 153.3 102 60.8
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 9.7e-35 150.6 98 63.3
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 6.3e-34 147.9 84 72.6
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.6e-32 143.3 137 48.2
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.3e-31 140.2 134 48.5
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 1.3e-31 140.2 73 80.8
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 2.0e-27 126.3 76 68.4
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 3.8e-23 112.1 124 41.9
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 1.2e-21 107.1 61 70.5
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 1.6e-21 106.7 118 44.9
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 1.0e-20 104.0 138 39.9
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 9.8e-19 97.4 55 69.1
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 6.3e-18 94.7 118 38.1
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 8.3e-18 94.4 91 47.3
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 6.6e-15 84.7 119 32.8
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 1.2e-13 80.5 112 33.9
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 6.4e-10 68.2 76 47.4
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 3.0e-07 59.3 162 25.3


User provided reference genes

Program Settings