Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 1.7e-132 476.1 259 100.0
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 5.4e-102 374.8 260 82.3
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 2.5e-75 286.2 253 65.2
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 4.2e-62 242.3 259 57.5
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 1.1e-57 227.6 265 55.8
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 1.4e-46 190.7 224 52.2
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 1.4e-46 190.7 238 50.8
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 7.2e-46 188.3 247 48.2
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 2.1e-45 186.8 243 47.3
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 2.1e-45 186.8 245 46.5
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 3.6e-45 186.0 232 50.0
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 3.6e-45 186.0 249 49.4
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 7.9e-45 184.9 249 49.0
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 1.8e-44 183.7 227 51.5
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 6.7e-44 181.8 249 46.6
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 8.8e-44 181.4 198 56.6
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 7.4e-43 178.3 251 45.8
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 9.7e-43 177.9 220 50.0
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 1.3e-42 177.6 249 48.6
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 1.3e-42 177.6 235 48.9
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 1.3e-42 177.6 254 46.9
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.7e-42 177.2 251 45.4
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 1.7e-42 177.2 212 51.9
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 1.7e-42 177.2 230 49.6
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.2e-42 176.8 251 45.8
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 4.8e-42 175.6 252 47.2
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 8.2e-42 174.9 217 48.8
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 8.2e-42 174.9 252 47.2
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 1.1e-41 174.5 211 53.6
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 3.1e-41 172.9 227 49.3
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 3.1e-41 172.9 226 50.4
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 3.1e-41 172.9 235 48.9
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 4.1e-41 172.6 227 48.5
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 4.1e-41 172.6 231 48.9
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 7.0e-41 171.8 234 49.6
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 1.2e-40 171.0 234 48.7
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 2.0e-40 170.2 231 48.9
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 2.6e-40 169.9 213 50.7
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 2.6e-40 169.9 249 49.0
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 4.5e-40 169.1 243 45.7
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 4.5e-40 169.1 221 46.6
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 1.7e-39 167.2 238 46.6
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 1.7e-39 167.2 217 48.4
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 2.2e-39 166.8 224 48.2
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 2.2e-39 166.8 227 47.6
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 2.9e-39 166.4 235 46.4
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 3.8e-39 166.0 236 45.3
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 5.0e-39 165.6 238 44.1
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 1.9e-38 163.7 238 45.0
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 4.2e-38 162.5 248 46.0
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 2.1e-37 160.2 245 45.3
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 2.1e-37 160.2 239 45.6
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 2.7e-37 159.8 248 44.0
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 6.1e-37 158.7 237 47.3
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 6.1e-37 158.7 227 45.4
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 6.1e-37 158.7 223 46.2
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 1.0e-36 157.9 205 49.8
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 1.4e-36 157.5 231 46.8
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 3.9e-36 156.0 231 45.5
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 5.2e-36 155.6 239 43.1
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 8.8e-36 154.8 207 46.9
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 1.5e-35 154.1 247 42.5
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 3.3e-35 152.9 247 42.5
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 4.4e-35 152.5 206 47.6
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 7.4e-35 151.8 225 45.3
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 1.7e-34 150.6 243 40.7
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.7e-34 150.6 212 47.2
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 1.7e-34 150.6 205 45.9
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 2.2e-34 150.2 220 45.5
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 2.2e-34 150.2 245 43.3
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 1.1e-33 147.9 220 45.0
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 2.4e-33 146.7 223 43.9
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 5.3e-33 145.6 211 46.0
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 5.3e-33 145.6 234 44.9
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 7.0e-33 145.2 187 48.1
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 4.5e-32 142.5 227 44.9
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 7.7e-32 141.7 231 43.7
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 1.7e-31 140.6 212 44.8
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 1.7e-31 140.6 215 44.2
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 2.2e-31 140.2 201 47.8
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 3.8e-31 139.4 185 48.1
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 8.5e-31 138.3 118 67.8
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 4.2e-30 136.0 221 42.5
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 5.5e-30 135.6 223 42.2
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 8.0e-29 131.7 113 63.7
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 8.0e-29 131.7 222 41.9
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 9.7e-27 124.8 98 63.3
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 6.3e-26 122.1 224 42.0
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 1.8e-25 120.6 218 42.7
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 2.4e-25 120.2 216 40.7
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 2.9e-23 113.2 228 39.0
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 8.5e-23 111.7 105 58.1
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 1.9e-22 110.5 220 37.7
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 1.9e-22 110.5 220 37.7
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 1.9e-22 110.5 220 37.7
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 1.9e-22 110.5 220 38.6
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 7.2e-22 108.6 249 35.3
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 7.2e-22 108.6 201 41.3
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 9.4e-22 108.2 182 41.2
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 1.2e-21 107.8 220 37.3
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 2.1e-21 107.1 218 37.2
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 2.1e-21 107.1 218 37.6
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 3.6e-21 106.3 219 37.0
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 3.6e-21 106.3 260 36.2
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 3.0e-20 103.2 208 38.0
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 5.2e-20 102.4 230 35.2
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 1.2e-19 101.3 220 38.2
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 2.0e-19 100.5 231 35.1
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 2.6e-19 100.1 260 35.4
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 2.6e-19 100.1 260 35.4
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 2.6e-19 100.1 260 35.4
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 3.4e-19 99.8 228 35.1
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 4.4e-19 99.4 214 36.0
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 9.8e-19 98.2 255 34.9
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 9.8e-19 98.2 91 57.1
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 8.3e-18 95.1 96 55.2
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 2.0e-16 90.5 192 36.5
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 1.3e-15 87.8 204 36.3
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 2.9e-15 86.7 125 40.8
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 2.9e-15 86.7 214 30.8
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 5.0e-15 85.9 125 41.6
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 8.6e-15 85.1 125 40.8
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 2.5e-14 83.6 214 35.5
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 4.2e-14 82.8 192 34.9
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 7.2e-14 82.0 257 33.1
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 2.1e-13 80.5 262 31.7
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.7e-10 70.9 127 38.6
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 2.2e-10 70.5 151 35.8
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 3.5e-08 63.2 153 35.3


User provided reference genes

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