Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62035873 Chenopodium quinoa HOM05D007625 ORTHO05D009738 2.8e-114 415.2 200 100.0
Hund20557 Selenicereus undatus HOM05D007625 ORTHO05D009738 3.0e-76 288.9 194 70.6
Atru.chr4.2832 Acer truncatum HOM05D007625 ORTHO05D009738 1.2e-69 266.9 194 64.4
PGR031G0588 Punica granatum HOM05D007625 ORTHO05D009738 6.1e-69 264.6 194 66.5
Potri.010G024900 Populus trichocarpa HOM05D007625 ORTHO05D009738 1.8e-68 263.1 195 67.2
GSVIVG01017755001 Vitis vinifera HOM05D007625 ORTHO05D009738 2.3e-68 262.7 194 65.5
Sabra10G0014200 Salix brachista HOM05D007625 ORTHO05D009738 5.2e-68 261.5 195 67.2
Thecc.04G284200 Theobroma cacao HOM05D007625 ORTHO05D009738 6.7e-68 261.2 194 64.9
Ciclev10005679m.g Citrus clementina HOM05D007625 ORTHO05D009738 3.3e-67 258.8 193 63.2
Sp3g14890 Schrenkiella parvula HOM05D007625 ORTHO05D009738 5.7e-67 258.1 194 63.9
Aqoxy2G02997 Aquilegia oxysepala HOM05D007625 ORTHO05D009738 7.4e-67 257.7 194 62.4
Eucgr.B01310 Eucalyptus grandis HOM05D007625 ORTHO05D009738 2.2e-66 256.1 195 65.1
CANSAT78G1499 Cannabis sativa HOM05D007625 ORTHO05D009738 3.7e-66 255.4 204 62.3
Lsat_1_v5_gn_5_53001 Lactuca sativa HOM05D007625 ORTHO05D009738 3.7e-66 255.4 195 64.6
BcaB06g25757 Brassica carinata HOM05D007625 ORTHO05D009738 6.3e-66 254.6 194 63.4
Duzib212G0442 Durio zibethinus HOM05D007625 ORTHO05D009738 8.2e-66 254.2 194 61.9
TAR633G2367 Trochodendron aralioides HOM05D007625 ORTHO05D009738 8.2e-66 254.2 194 64.9
QL06p008815 Quercus lobata HOM05D007625 ORTHO05D009738 1.4e-65 253.4 195 62.1
CSS0007271 Camellia sinensis var. sinensis HOM05D007625 ORTHO05D009738 3.1e-65 252.3 195 63.1
Lj4g0027770 Lotus japonicus HOM05D007625 ORTHO05D009738 3.1e-65 252.3 194 64.4
Actinidia00027 Actinidia chinensis HOM05D007625 ORTHO05D009738 5.3e-65 251.5 195 61.5
Lalb_Chr13g0303611 Lupinus albus HOM05D007625 ORTHO05D009738 9.1e-65 250.8 194 63.9
MBI18_g04687_MAGBIO Magnolia biondii HOM05D007625 ORTHO05D009738 9.1e-65 250.8 203 61.1
TWI09G0101 Tripterygium wilfordii HOM05D007625 ORTHO05D009738 9.1e-65 250.8 192 62.5
Thhalv10021369m.g Eutrema salsugineum HOM05D007625 ORTHO05D009738 2.0e-64 249.6 194 62.9
Medtr4g119840 Medicago truncatula HOM05D007625 ORTHO05D009738 2.6e-64 249.2 194 62.4
arahy.Tifrunner.gnm1.ann1.96EVWK Arachis hypogaea HOM05D007625 ORTHO05D009738 3.5e-64 248.8 202 59.9
arahy.Tifrunner.gnm1.ann1.QKB3E6 Arachis hypogaea HOM05D007625 ORTHO05D009738 3.5e-64 248.8 202 59.4
Gohir.A09G239300 Gossypium hirsutum HOM05D007625 ORTHO05D009738 5.9e-64 248.1 192 60.9
PSO017G7039 Papaver somniferum HOM05D007625 ORTHO05D009738 5.9e-64 248.1 194 62.4
Manes.03G194700 Manihot esculenta HOM05D007625 ORTHO05D009738 7.7e-64 247.7 196 62.8
AL3G29430 Arabidopsis lyrata HOM05D007625 ORTHO05D009738 1.0e-63 247.3 194 60.8
Gorai.006G263200 Gossypium raimondii HOM05D007625 ORTHO05D009738 1.0e-63 247.3 192 61.5
Lj3A816T27 Lonicera japonica HOM05D007625 ORTHO05D009738 1.7e-63 246.5 209 60.8
Gohir.D09G240200 Gossypium hirsutum HOM05D007625 ORTHO05D009738 5.0e-63 245.0 192 60.9
Hma1.2p1_1567F.1_g291060 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 5.0e-63 245.0 180 65.6
SGA_v2.0_scaffold428G51521 Striga asiatica HOM05D007625 ORTHO05D009738 5.0e-63 245.0 194 62.9
CARHR091770 Cardamine hirsuta HOM05D007625 ORTHO05D009738 6.5e-63 244.6 194 61.3
VMungo1215G1867 Vigna mungo HOM05D007625 ORTHO05D009738 6.5e-63 244.6 194 61.9
Ca_21505_v3 Cicer arietinum L. HOM05D007625 ORTHO05D009738 8.5e-63 244.2 194 62.4
Rhsim02G0010500 Rhododendron simsii HOM05D007625 ORTHO05D009738 8.5e-63 244.2 195 61.0
ECA240G3588 Erigeron canadensis HOM05D007625 ORTHO05D009738 1.1e-62 243.8 194 61.9
C05p49750 Brassica napus HOM05D007625 ORTHO05D009738 1.5e-62 243.4 205 59.5
Glyma.07G247900 Glycine max HOM05D007625 ORTHO05D009738 2.5e-62 242.7 196 62.2
TPR.G3171 Trifolium pratense HOM05D007625 ORTHO05D009738 2.5e-62 242.7 196 62.8
Migut.N00092 Erythranthe guttata HOM05D007625 ORTHO05D009738 3.2e-62 242.3 194 60.8
Rhsim02G0009500 Rhododendron simsii HOM05D007625 ORTHO05D009738 3.2e-62 242.3 195 60.5
BolC5t33727H Brassica oleracea HOM05D007625 ORTHO05D009738 9.4e-62 240.7 214 57.5
Cc03_g01990 Coffea canephora HOM05D007625 ORTHO05D009738 2.1e-61 239.6 194 62.4
BraA05t22123Z Brassica rapa HOM05D007625 ORTHO05D009738 2.7e-61 239.2 214 57.0
HanXRQChr03g0080751 Helianthus annuus HOM05D007625 ORTHO05D009738 2.7e-61 239.2 195 59.0
BcaNung06438 Brassica carinata HOM05D007625 ORTHO05D009738 6.1e-61 238.0 189 60.3
RcHm_v2.0_Chr4g0422131 Rosa chinensis HOM05D007625 ORTHO05D009738 8.0e-61 237.7 194 57.7
FAN07G2640 Fragaria x ananassa HOM05D007625 ORTHO05D009738 1.0e-60 237.3 194 57.7
Psat4g025880 Pisum sativum HOM05D007625 ORTHO05D009738 1.0e-60 237.3 194 60.3
Prupe.1G137400 Prunus persica HOM05D007625 ORTHO05D009738 1.0e-60 237.3 194 60.3
MD13G1169000 Malus domestica HOM05D007625 ORTHO05D009738 1.4e-60 236.9 192 59.9
FvH4_4g17960 Fragaria vesca HOM05D007625 ORTHO05D009738 2.3e-60 236.1 196 57.7
FAN12G1696 Fragaria x ananassa HOM05D007625 ORTHO05D009738 2.3e-60 236.1 196 57.7
ATR0796G164 Amborella trichopoda HOM05D007625 ORTHO05D009738 3.0e-60 235.7 194 59.3
Phvul.003G105100 Phaseolus vulgaris HOM05D007625 ORTHO05D009738 4.0e-60 235.3 195 60.5
DCAR_027078 Daucus carota HOM05D007625 ORTHO05D009738 2.0e-59 233.0 199 58.3
Hma1.2p1_0078F.1_g040640 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 1.3e-58 230.3 180 62.2
Cpa.g.sc16.167 Carica papaya HOM05D007625 ORTHO05D009738 2.8e-58 229.2 194 58.8
Os01g0120400 Oryza sativa ssp. japonica HOM05D007625 ORTHO05D009738 2.8e-58 229.2 203 54.2
EL10Ac3g06592 Beta vulgaris HOM05D007625 ORTHO05D009738 3.7e-58 228.8 197 58.9
FAN12G4294 Fragaria x ananassa HOM05D007625 ORTHO05D009738 4.8e-58 228.4 196 56.1
AT3G16565 Arabidopsis thaliana HOM05D007625 ORTHO05D009738 6.3e-58 228.0 227 52.9
vmacro15237 Vaccinium macrocarpon HOM05D007625 ORTHO05D009738 1.4e-57 226.9 209 56.0
CSS0032939 Camellia sinensis var. sinensis HOM05D007625 ORTHO05D009738 3.1e-57 225.7 214 54.7
Dinv44384 Davidia involucrata HOM05D007625 ORTHO05D005073 5.0e-55 218.4 195 57.9
SalBow5G0239 Salvia bowleyana HOM05D007625 ORTHO05D009738 9.4e-54 214.2 175 58.3
FAN17G2144 Fragaria x ananassa HOM05D007625 ORTHO05D009738 4.7e-53 211.8 220 49.5
Pp3c1_7890 Physcomitrium patens HOM05D007625 ORTHO05D009738 5.2e-52 208.4 194 53.6
Glyma.17G026200 Glycine max HOM05D007625 ORTHO05D009738 9.8e-51 204.1 214 51.4
Zm00001eb334800 Zea mays HOM05D007625 ORTHO05D009738 4.2e-46 188.7 167 56.9
Nn3g21433 Nelumbo nucifera HOM05D007625 ORTHO05D009738 1.6e-45 186.8 194 52.1
CDE12G0709 Ceratophyllum demersum HOM05D007625 ORTHO05D009738 1.4e-41 173.7 194 47.4
SMO002G0002 Selaginella moellendorffii HOM05D007625 ORTHO05D009738 2.3e-39 166.4 194 45.9
SMO356G0461 Selaginella moellendorffii HOM05D007625 ORTHO05D009738 1.5e-38 163.7 194 45.4
AagrBONN_evm.TU.Sc2ySwM_228.2358 Anthoceros agrestis HOM05D007625 ORTHO05D009738 8.9e-36 154.5 136 55.1
Lj3A819G38 Lonicera japonica HOM05D007625 ORTHO05D009738 1.2e-35 154.1 210 46.2
Carub.0003s1629 Capsella rubella HOM05D007625 ORTHO05D009738 2.0e-35 153.3 116 60.3
Aa31LG8G3700 Aethionema arabicum HOM05D007625 ORTHO05D009738 4.6e-32 142.1 184 45.7
MCO16G322 Micromonas commoda HOM05D007625 ORTHO05D009738 1.2e-29 134.0 182 40.7
Sc19g0005180 Simmondsia chinensis HOM05D007625 ORTHO05D009738 6.2e-29 131.7 169 45.0
BcaB03g15776 Brassica carinata HOM05D007625 ORTHO05D009738 7.0e-25 118.2 104 59.6
unitig_0.g621 Utricularia gibba HOM05D007625 ORTHO05D009738 2.7e-24 116.3 148 45.9
Hma1.2p1_0785F.1_g217410 Hydrangea macrophylla HOM05D007625 ORTHO05D009738 2.9e-18 96.3 66 62.1
Cpa.g.c47082 Carica papaya HOM05D007625 ORTHO05D009738 1.4e-17 94.0 84 58.3
Aqoxy2G02999 Aquilegia oxysepala HOM05D007625 ORTHO05D009738 2.7e-16 89.7 61 65.6
Medtr4g123440 Medicago truncatula HOM05D007625 ORTHO05D009738 8.9e-12 74.7 106 45.3
Glyma.19G060100 Glycine max HOM05D007625 ORTHO05D009738 9.9e-11 71.2 93 44.1
MD16G1169600 Malus domestica HOM05D007625 ORTHO05D009738 3.2e-09 66.2 61 49.2
PGR044G0467 Punica granatum HOM05D001816 ORTHO05D002001 3.5e-08 62.8 164 30.5
AL1G57820 Arabidopsis lyrata HOM05D001816 ORTHO05D002001 1.1e-06 57.8 182 28.0
A05p20290 Brassica napus HOM05D001816 ORTHO05D002001 1.9e-06 57.0 182 26.4
CDE05G2317 Ceratophyllum demersum HOM05D001816 ORTHO05D002001 1.9e-06 57.0 163 28.2
MBI15_g27187_MAGBIO Magnolia biondii HOM05D001816 ORTHO05D002001 1.9e-06 57.0 182 27.5
Peaxi162Scf00133g00523 Petunia axillaris HOM05D001816 ORTHO05D002001 1.9e-06 57.0 182 28.6
AUR62017503 Chenopodium quinoa HOM05D001816 ORTHO05D002001 3.3e-06 56.2 163 28.2
Thhalv10011205m.g Eutrema salsugineum HOM05D001816 ORTHO05D002001 3.3e-06 56.2 163 28.8
AT1G50200 Arabidopsis thaliana HOM05D001816 ORTHO05D002001 4.3e-06 55.8 182 27.5
AUR62028574 Chenopodium quinoa HOM05D001816 ORTHO05D002001 4.3e-06 55.8 135 31.9
AUR62033529 Chenopodium quinoa HOM05D001816 ORTHO05D002001 4.3e-06 55.8 135 31.9
arahy.Tifrunner.gnm1.ann1.56UDE7 Arachis hypogaea HOM05D001816 ORTHO05D002001 5.6e-06 55.5 161 29.2
arahy.Tifrunner.gnm1.ann1.8P6R80 Arachis hypogaea HOM05D001816 ORTHO05D002001 5.6e-06 55.5 161 29.2
BraA05t20939Z Brassica rapa HOM05D001816 ORTHO05D002001 5.6e-06 55.5 131 29.8


User provided reference genes

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