Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62035842 Chenopodium quinoa HOM05D006968 ORTHO05D008748 5.7e-68 260.8 129 100.0
AUR62027636 Chenopodium quinoa HOM05D006968 ORTHO05D008748 2.4e-50 202.2 129 80.6
Ah.02g125570 Amaranthus hybridus HOM05D006968 ORTHO05D008748 6.5e-48 194.1 129 71.3
EL10Ac8g19830 Beta vulgaris HOM05D006968 ORTHO05D008748 9.4e-47 190.3 129 72.9
Hund21573 Selenicereus undatus HOM05D006968 ORTHO05D008748 4.1e-42 174.9 130 64.6
Rhsim02G0123400 Rhododendron simsii HOM05D006968 ORTHO05D008748 5.2e-37 157.9 130 55.4
Eucgr.E02869 Eucalyptus grandis HOM05D006968 ORTHO05D008748 8.8e-37 157.1 130 57.7
Sc05g0006720 Simmondsia chinensis HOM05D000065 ORTHO05D000162 5.7e-36 154.5 106 67.9
Actinidia07663 Actinidia chinensis HOM05D006968 ORTHO05D008748 1.1e-34 150.2 125 59.2
Nitab4.5_0003913g0060 Nicotiana tabacum HOM05D006968 ORTHO05D008748 1.8e-34 149.4 122 56.6
Nitab4.5_0010884g0010 Nicotiana tabacum HOM05D006968 ORTHO05D008748 4.1e-34 148.3 122 56.6
Solyc02g071600.4 Solanum lycopersicum HOM05D006968 ORTHO05D008748 7.0e-34 147.5 125 54.4
CSS0042403 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 9.1e-34 147.1 122 54.9
CAN.G257.117 Capsicum annuum HOM05D006968 ORTHO05D008748 9.1e-34 147.1 125 54.4
CSS0021911 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 1.2e-33 146.7 122 54.1
Oeu042433.1 Olea europaea HOM05D006968 ORTHO05D008748 1.6e-33 146.4 122 55.7
Lsat_1_v5_gn_0_21300 Lactuca sativa HOM05D006968 ORTHO05D008748 2.7e-33 145.6 129 50.4
PGR042G2565 Punica granatum HOM05D006968 ORTHO05D008748 4.5e-33 144.8 120 54.2
SGA_v2.0_scaffold1G00109 Striga asiatica HOM05D006968 ORTHO05D008748 4.5e-33 144.8 122 54.9
MSTRG.16189 Avicennia marina HOM05D006968 ORTHO05D008748 5.9e-33 144.4 129 50.4
SalBow8G0548 Salvia bowleyana HOM05D006968 ORTHO05D008748 5.9e-33 144.4 120 55.0
SalBow8G1131 Salvia bowleyana HOM05D006968 ORTHO05D008748 5.9e-33 144.4 120 55.0
Prupe.4G071300 Prunus persica HOM05D006968 ORTHO05D008748 7.7e-33 144.1 128 55.5
Sopen02g020620 Solanum pennellii HOM05D006968 ORTHO05D008748 7.7e-33 144.1 126 54.0
Atru.chr10.1476 Acer truncatum HOM05D006968 ORTHO05D008748 1.0e-32 143.7 121 57.9
CANSAT35G0299 Cannabis sativa HOM05D006968 ORTHO05D008748 1.0e-32 143.7 125 55.2
DCAR_007922 Daucus carota HOM05D000065 ORTHO05D000162 1.3e-32 143.3 120 55.0
Cpa.g.sc51.7 Carica papaya HOM05D006968 ORTHO05D008748 2.3e-32 142.5 119 58.0
PSO675G0867 Papaver somniferum HOM05D006968 ORTHO05D008748 2.3e-32 142.5 120 56.7
MD10G1270500 Malus domestica HOM05D006968 ORTHO05D008748 3.8e-32 141.7 129 57.4
TAR627G0978 Trochodendron aralioides HOM05D006968 ORTHO05D008748 3.8e-32 141.7 122 51.6
PSO541G0278 Papaver somniferum HOM05D006968 ORTHO05D008748 8.6e-32 140.6 120 56.7
HanXRQChr02g0055391 Helianthus annuus HOM05D006968 ORTHO05D008748 1.5e-31 139.8 123 56.9
TWI73G0998 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 1.5e-31 139.8 120 54.2
PGSC0003DMG400007245 Solanum tuberosum HOM05D006968 ORTHO05D008748 3.2e-31 138.7 121 52.9
Cfa001060 Carpinus fangiana HOM05D006968 ORTHO05D008748 4.2e-31 138.3 119 53.8
FvH4_3g06600 Fragaria vesca HOM05D006968 ORTHO05D008748 4.2e-31 138.3 131 51.9
CiPaw.09G132600 Carya illinoinensis HOM05D006968 ORTHO05D008748 5.5e-31 137.9 120 55.0
FAN16G1632 Fragaria x ananassa HOM05D006968 ORTHO05D008748 5.5e-31 137.9 131 51.1
COL.COLO4_22824 Corchorus olitorius HOM05D006968 ORTHO05D008748 7.2e-31 137.5 129 51.2
QL05p052638 Quercus lobata HOM05D006968 ORTHO05D008748 7.2e-31 137.5 118 54.2
FAN25G0438 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.2e-30 136.7 131 51.1
Dinv32313 Davidia involucrata HOM05D006968 ORTHO05D008748 2.1e-30 136.0 127 51.2
Nn3g20980 Nelumbo nucifera HOM05D006968 ORTHO05D008748 2.8e-30 135.6 117 54.7
Manes.17G062400 Manihot esculenta HOM05D006968 ORTHO05D008748 3.6e-30 135.2 119 51.3
Haze_05452 Corylus avellana HOM05D006968 ORTHO05D008748 4.7e-30 134.8 122 54.9
RcHm_v2.0_Chr5g0012541 Rosa chinensis HOM05D006968 ORTHO05D008748 6.1e-30 134.4 119 52.9
Lj2A313T77 Lonicera japonica HOM05D006968 ORTHO05D008748 1.0e-29 133.7 125 52.0
FAN11G1072 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.8e-29 132.9 134 50.7
HanXRQChr02g0055401 Helianthus annuus HOM05D006968 ORTHO05D008748 1.8e-29 132.9 123 55.3
Duzib192G0634 Durio zibethinus HOM05D006968 ORTHO05D008748 5.2e-29 131.3 111 56.8
Potri.011G076600 Populus trichocarpa HOM05D006968 ORTHO05D008748 5.2e-29 131.3 120 52.5
ClCG03G007290 Citrullus lanatus HOM05D006968 ORTHO05D008748 1.2e-28 130.2 120 54.2
MELO3C002693.2 Cucumis melo HOM05D006968 ORTHO05D008748 1.2e-28 130.2 120 53.3
SGA_v2.0_scaffold273G46455 Striga asiatica HOM05D006968 ORTHO05D008748 1.2e-28 130.2 118 53.4
CsaV3_1G032900 Cucumis sativus L. HOM05D006968 ORTHO05D008748 2.0e-28 129.4 120 53.3
Sabra11G0063700 Salix brachista HOM05D006968 ORTHO05D008748 2.0e-28 129.4 122 50.0
Aqoxy1G01892 Aquilegia oxysepala HOM05D006968 ORTHO05D008748 4.4e-28 128.3 122 48.4
Sed0009046 Sechium edule HOM05D006968 ORTHO05D008748 4.4e-28 128.3 120 50.8
unitig_748.g7643 Utricularia gibba HOM05D001519 ORTHO05D008748 5.7e-28 127.9 132 49.2
Gohir.A05G152300 Gossypium hirsutum HOM05D006968 ORTHO05D008748 7.5e-28 127.5 114 54.4
Gohir.D05G154800 Gossypium hirsutum HOM05D006968 ORTHO05D008748 9.8e-28 127.1 114 54.4
Ciclev10016662m.g Citrus clementina HOM05D006968 ORTHO05D008748 1.3e-27 126.7 115 52.2
Gorai.009G159100 Gossypium raimondii HOM05D006968 ORTHO05D008748 3.7e-27 125.2 114 53.5
CiPaw.09G132700 Carya illinoinensis HOM05D006968 ORTHO05D008748 6.3e-27 124.4 121 52.1
Cc02_g16200 Coffea canephora HOM05D006968 ORTHO05D008748 1.8e-26 122.9 123 48.8
Thecc.06G160300 Theobroma cacao HOM05D006968 ORTHO05D008748 3.1e-26 122.1 109 53.2
THA.LOC104798448 Tarenaya hassleriana HOM05D006968 ORTHO05D008748 9.2e-26 120.6 120 50.0
ECA248G0802 Erigeron canadensis HOM05D006968 ORTHO05D008748 1.6e-25 119.8 110 51.8
MD00G1093500 Malus domestica HOM05D006968 ORTHO05D008748 2.0e-25 119.4 119 52.9
SGA_v2.0_scaffold18G08383 Striga asiatica HOM05D006968 ORTHO05D008748 1.7e-24 116.3 110 51.8
CDE10G0144 Ceratophyllum demersum HOM05D000065 ORTHO05D008748 2.9e-24 115.5 108 48.1
QL05p052648 Quercus lobata HOM05D006968 ORTHO05D008748 3.8e-24 115.2 107 51.4
VMungo0540G1786 Vigna mungo HOM05D006968 ORTHO05D008748 3.3e-23 112.1 111 49.5
Actinidia39540 Actinidia chinensis HOM05D006968 ORTHO05D008748 4.3e-23 111.7 117 52.1
Aa31LG9G7390 Aethionema arabicum HOM05D006968 ORTHO05D008748 4.3e-23 111.7 121 45.5
Phvul.006G168900 Phaseolus vulgaris HOM05D006968 ORTHO05D008748 7.3e-23 110.9 111 49.5
arahy.Tifrunner.gnm1.ann1.5H3RNB Arachis hypogaea HOM05D006968 ORTHO05D008748 1.6e-22 109.8 114 50.0
Lj6g0008479 Lotus japonicus HOM05D006968 ORTHO05D008748 2.8e-22 109.0 114 47.4
arahy.Tifrunner.gnm1.ann1.9V28L0 Arachis hypogaea HOM05D006968 ORTHO05D008748 3.6e-22 108.6 114 50.0
A06p46470 Brassica napus HOM05D006968 ORTHO05D008748 4.0e-21 105.1 104 51.0
Glyma.13G222900 Glycine max HOM05D006968 ORTHO05D008748 4.0e-21 105.1 107 50.5
BcaC06g34413 Brassica carinata HOM05D006968 ORTHO05D008748 2.0e-20 102.8 104 49.0
C07p28780 Brassica napus HOM05D006968 ORTHO05D008748 2.0e-20 102.8 104 49.0
Sp2g10550 Schrenkiella parvula HOM05D006968 ORTHO05D008748 2.0e-20 102.8 109 46.8
BraA06t27520Z Brassica rapa HOM05D006968 ORTHO05D008748 2.6e-20 102.4 104 50.0
TPR.G4467 Trifolium pratense HOM05D006968 ORTHO05D008748 3.4e-20 102.1 109 45.9
Carub.0008s0235 Capsella rubella HOM05D006968 ORTHO05D008748 4.4e-20 101.7 104 49.0
Lsat_1_v5_gn_1_112261 Lactuca sativa HOM05D006968 ORTHO05D008748 4.4e-20 101.7 91 51.6
Zm00001eb154290 Zea mays HOM05D006968 ORTHO05D008748 4.4e-20 101.7 116 46.6
FAN12G2652 Fragaria x ananassa HOM05D006968 ORTHO05D008748 5.7e-20 101.3 121 44.6
GSVIVG01021311001 Vitis vinifera HOM05D006968 ORTHO05D008748 5.7e-20 101.3 86 57.0
FvH4_4g34020 Fragaria vesca HOM05D006968 ORTHO05D008748 7.5e-20 100.9 121 44.6
BcaC06g31531 Brassica carinata HOM05D006968 ORTHO05D008748 9.8e-20 100.5 104 49.0
BolC7t43414H Brassica oleracea HOM05D006968 ORTHO05D008748 9.8e-20 100.5 104 48.1
SEGI_37019 Sequoiadendron giganteum HOM05D006968 ORTHO05D008748 9.8e-20 100.5 121 39.7
Migut.M00982 Erythranthe guttata HOM05D006968 ORTHO05D008748 2.9e-19 99.0 72 59.7
Thhalv10001012m.g Eutrema salsugineum HOM05D006968 ORTHO05D008748 2.9e-19 99.0 102 49.0
Psat1g192720 Pisum sativum HOM05D006968 ORTHO05D008748 2.9e-19 99.0 100 48.0
Zm00001eb045900 Zea mays HOM05D006968 ORTHO05D008748 2.9e-19 99.0 116 44.8
AL8G12990 Arabidopsis lyrata HOM05D006968 ORTHO05D008748 4.9e-19 98.2 104 47.1
Medtr2g018105 Medicago truncatula HOM05D006968 ORTHO05D008748 8.3e-19 97.4 98 48.0
AT5G45660 Arabidopsis thaliana HOM05D006968 ORTHO05D008748 1.4e-18 96.7 104 46.2
CARHR176320 Cardamine hirsuta HOM05D006968 ORTHO05D008748 3.2e-18 95.5 104 45.2
Lalb_Chr18g0055011 Lupinus albus HOM05D006968 ORTHO05D008748 4.1e-18 95.1 114 43.9
Os01g0727900 Oryza sativa ssp. japonica HOM05D006968 ORTHO05D008748 9.2e-18 94.0 116 44.8
HPP92_009092 Vanilla planifolia HOM05D006968 ORTHO05D008748 2.7e-17 92.4 115 42.6
Ca_00496_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 3.5e-17 92.0 100 45.0
Ca_30235_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 3.5e-17 92.0 100 45.0
FAN22G0056 Fragaria x ananassa HOM05D006968 ORTHO05D008748 2.3e-13 79.3 146 36.3
Pp3c13_11400 Physcomitrium patens HOM05D006968 ORTHO05D008748 8.9e-13 77.4 119 34.5
ECA248G3047 Erigeron canadensis HOM05D006968 ORTHO05D008748 1.7e-11 73.2 129 34.9
SGA_v2.0_scaffold305G47958 Striga asiatica HOM05D000046 ORTHO05D405780 1.3e-08 63.5 51 56.9
TWI53G1777 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 1.7e-08 63.2 90 41.1
GSVIVG01021310001 Vitis vinifera HOM05D006968 ORTHO05D008748 5.0e-08 61.6 52 59.6
SGA_v2.0_scaffold36G14429 Striga asiatica HOM05D003154 ORTHO05D003565 8.6e-08 60.8 49 55.1
Lalb_Chr18g0055041 Lupinus albus HOM05D006968 ORTHO05D008748 5.6e-07 58.2 68 42.6


User provided reference genes

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