Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62035752 Chenopodium quinoa HOM05D007378 ORTHO05D007577 0.0e+00 1331.6 680 100.0
AUR62033831 Chenopodium quinoa HOM05D007378 ORTHO05D007577 1.8e-293 1012.3 683 78.8
Hund05208 Selenicereus undatus HOM05D007378 ORTHO05D007577 1.1e-93 348.6 721 39.0
QL02p011519 Quercus lobata HOM05D007378 ORTHO05D007577 2.5e-50 204.5 626 30.2
Sc15g0005020 Simmondsia chinensis HOM05D007378 ORTHO05D007577 4.3e-50 203.8 608 32.7
MD15G1012700 Malus domestica HOM05D007378 ORTHO05D007577 2.8e-49 201.1 611 30.4
Prupe.1G365800 Prunus persica HOM05D007378 ORTHO05D007577 4.1e-48 197.2 634 30.6
MD08G1013300 Malus domestica HOM05D007378 ORTHO05D007577 3.8e-46 190.7 621 29.6
Hma1.2p1_0023F.1_g015450 Hydrangea macrophylla HOM05D007378 ORTHO05D007577 1.5e-42 178.7 724 28.7
Potri.002G022800 Populus trichocarpa HOM05D007378 ORTHO05D007577 4.3e-42 177.2 673 30.3
Dinv31841 Davidia involucrata HOM05D007378 ORTHO05D007577 1.1e-40 172.6 623 28.7
FvH4_2g38520 Fragaria vesca HOM05D007378 ORTHO05D007577 5.3e-40 170.2 648 29.0
Dinv39514 Davidia involucrata HOM05D007378 ORTHO05D007577 1.2e-39 169.1 633 29.9
Thecc.08G043900 Theobroma cacao HOM05D007378 ORTHO05D007577 2.9e-38 164.5 639 27.9
CiPaw.08G066200 Carya illinoinensis HOM05D007378 ORTHO05D007577 3.8e-38 164.1 666 27.0
Potri.005G238800 Populus trichocarpa HOM05D007378 ORTHO05D007577 3.8e-38 164.1 627 29.2
Sabra02G0018600 Salix brachista HOM05D007378 ORTHO05D007577 2.5e-37 161.4 667 28.6
RcHm_v2.0_Chr6g0302801 Rosa chinensis HOM05D007378 ORTHO05D007577 4.2e-37 160.6 638 28.2
CSS0021578 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 3.6e-36 157.5 622 29.9
FAN15G3724 Fragaria x ananassa HOM05D007378 ORTHO05D007577 7.9e-36 156.4 666 28.1
Ciclev10000382m.g Citrus clementina HOM05D007378 ORTHO05D007577 1.1e-34 152.5 633 28.0
Duzib093G0923 Durio zibethinus HOM05D007378 ORTHO05D007577 9.7e-34 149.4 650 27.2
Haze_22630 Corylus avellana HOM05D007378 ORTHO05D007577 3.7e-33 147.5 614 26.5
FAN27G0575 Fragaria x ananassa HOM05D007378 ORTHO05D007577 6.3e-33 146.7 672 29.0
Cpa.g.sc26.38 Carica papaya HOM05D007378 ORTHO05D007577 8.2e-33 146.4 636 27.7
Cfa013945 Carpinus fangiana HOM05D007378 ORTHO05D007577 7.0e-32 143.3 605 26.1
Sabra05G0184500 Salix brachista HOM05D007378 ORTHO05D007577 1.5e-31 142.1 642 28.7
Actinidia15419 Actinidia chinensis HOM05D007378 ORTHO05D007577 1.4e-29 135.6 769 26.4
Lalb_Chr11g0061931 Lupinus albus HOM05D007378 ORTHO05D007577 9.4e-29 132.9 644 27.3
Manes.05G147800 Manihot esculenta HOM05D007378 ORTHO05D007577 3.6e-28 131.0 629 27.2
FAN20G0665 Fragaria x ananassa HOM05D007378 ORTHO05D007577 8.0e-28 129.8 598 27.8
TWI12G0183 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 8.0e-28 129.8 662 26.4
Duzib116G0067 Durio zibethinus HOM05D007378 ORTHO05D007577 1.0e-27 129.4 557 27.6
TAR381G0696 Trochodendron aralioides HOM05D007378 ORTHO05D007577 1.8e-27 128.6 641 25.7
Oeu020868.1 Olea europaea HOM05D007378 ORTHO05D007577 3.0e-27 127.9 608 27.1
CSS0010969 Camellia sinensis var. sinensis HOM05D007378 ORTHO05D007577 5.2e-27 127.1 341 33.7
COL.COLO4_26152 Corchorus olitorius HOM05D007378 ORTHO05D007577 5.7e-26 123.6 646 26.3
TWI36G1616 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 6.3e-25 120.2 654 26.0
GSVIVG01009901001 Vitis vinifera HOM05D007378 ORTHO05D007577 9.1e-24 116.3 517 27.5
Eucgr.F00598 Eucalyptus grandis HOM05D007378 ORTHO05D007577 1.6e-23 115.5 634 25.2
Rhsim07G0247100 Rhododendron simsii HOM05D007378 ORTHO05D007577 3.2e-21 107.8 570 25.6
TPR.G34540 Trifolium pratense HOM05D007378 ORTHO05D007577 5.5e-21 107.1 677 24.5
PGSC0003DMG400009935 Solanum tuberosum HOM05D007378 ORTHO05D007577 1.2e-20 105.9 352 28.1
CiPaw.07G150400 Carya illinoinensis HOM05D007378 ORTHO05D007577 2.7e-20 104.8 536 25.9
Psat5g013200 Pisum sativum HOM05D007378 ORTHO05D007577 2.7e-20 104.8 659 26.7
Glyma.04G024500 Glycine max HOM05D007378 ORTHO05D007577 1.4e-19 102.4 653 25.0
Lj1g0027004 Lotus japonicus HOM05D007378 ORTHO05D007577 2.3e-19 101.7 601 25.3
Sopen04g035030 Solanum pennellii HOM05D007378 ORTHO05D007577 2.3e-19 101.7 353 28.3
Medtr3g113840 Medicago truncatula HOM05D007378 ORTHO05D007577 3.0e-19 101.3 622 24.8
MSTRG.25246 Avicennia marina HOM05D007378 ORTHO05D007577 8.8e-19 99.8 341 29.0
Actinidia16984 Actinidia chinensis HOM05D007378 ORTHO05D007577 1.2e-18 99.4 642 25.5
TWI56G0017 Tripterygium wilfordii HOM05D007378 ORTHO05D007577 2.0e-18 98.6 584 26.5
Manes.18G013740 Manihot esculenta HOM05D007378 ORTHO05D007577 2.6e-18 98.2 630 26.0
Solyc04g081420.4 Solanum lycopersicum HOM05D007378 ORTHO05D007577 2.6e-18 98.2 400 27.2
VMungo0647G1459 Vigna mungo HOM05D007378 ORTHO05D007577 2.8e-17 94.7 596 24.3
Cc10_g01700 Coffea canephora HOM05D007378 ORTHO05D007577 4.8e-17 94.0 690 23.8
Glyma.17G258000 Glycine max HOM05D007378 ORTHO05D007577 4.8e-17 94.0 594 24.6
Nn5g30152 Nelumbo nucifera HOM05D007378 ORTHO05D007577 4.8e-17 94.0 663 24.6
Duzib041G0283 Durio zibethinus HOM05D007378 ORTHO05D007577 8.3e-17 93.2 405 26.4
Glyma.06G024600 Glycine max HOM05D007378 ORTHO05D007577 8.3e-17 93.2 671 25.3
Lalb_Chr08g0246161 Lupinus albus HOM05D007378 ORTHO05D007577 8.3e-17 93.2 669 25.0
Phvul.009G016700 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 7.0e-16 90.1 630 24.0
VMungo1309G2950 Vigna mungo HOM05D007378 ORTHO05D007577 1.2e-15 89.4 594 25.1
Ca_15483_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 2.0e-15 88.6 611 25.2
CAN.G311.27 Capsicum annuum HOM05D007378 ORTHO05D007577 2.7e-15 88.2 656 23.6
Glyma.14G219000 Glycine max HOM05D007378 ORTHO05D007577 1.0e-14 86.3 575 23.8
Nitab4.5_0002561g0040 Nicotiana tabacum HOM05D007378 ORTHO05D007577 5.0e-14 84.0 618 25.9
CANSAT25G3202 Cannabis sativa HOM05D007378 ORTHO05D007577 5.5e-13 80.5 630 24.9
Ca_13427_v3 Cicer arietinum L. HOM05D007378 ORTHO05D007577 1.2e-12 79.3 567 25.0
Phvul.001G006800 Phaseolus vulgaris HOM05D007378 ORTHO05D007577 1.2e-12 79.3 554 23.8
MBI05_g30742_MAGBIO Magnolia biondii HOM05D007378 ORTHO05D007577 1.6e-12 79.0 601 25.0
DCAR_013867 Daucus carota HOM05D007378 ORTHO05D007577 3.6e-12 77.8 694 24.6
arahy.Tifrunner.gnm1.ann1.WP2VUZ Arachis hypogaea HOM05D007378 ORTHO05D007577 2.3e-11 75.1 580 25.9
Psat6g003040 Pisum sativum HOM05D007378 ORTHO05D007577 3.0e-11 74.7 610 24.6
arahy.Tifrunner.gnm1.ann1.KUKA7T Arachis hypogaea HOM05D007378 ORTHO05D007577 8.8e-11 73.2 578 25.3
Peaxi162Scf00438g00718 Petunia axillaris HOM05D007378 ORTHO05D007577 2.6e-10 71.6 367 25.6
TPR.G26373 Trifolium pratense HOM05D007378 ORTHO05D007577 1.3e-09 69.3 558 22.9
vmacro21724 Vaccinium macrocarpon HOM05D007378 ORTHO05D007577 1.1e-08 66.2 513 25.1
Atru.chr13.298 Acer truncatum HOM05D007378 ORTHO05D007577 1.8e-08 65.5 94 44.7
Lj5g0002996 Lotus japonicus HOM05D007378 ORTHO05D007577 9.1e-08 63.2 599 24.5
SalBow7G4715 Salvia bowleyana HOM05D007378 ORTHO05D007577 5.9e-07 60.5 332 25.6
Atru.chr13.296 Acer truncatum HOM05D007378 ORTHO05D007577 1.0e-06 59.7 399 22.8
PGR031G0679 Punica granatum HOM05D007378 ORTHO05D007577 3.8e-06 57.8 598 23.9


User provided reference genes

Program Settings