Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62035679 Chenopodium quinoa HOM05D005351 ORTHO05D006542 0.0e+00 1777.7 971 100.0
AUR62017130 Chenopodium quinoa HOM05D005351 ORTHO05D006542 0.0e+00 1654.8 981 92.0
EL10Ac4g07541 Beta vulgaris HOM05D005351 ORTHO05D006542 1.3e-302 1043.1 1046 62.0
Ah.06g181500 Amaranthus hybridus HOM05D005351 ORTHO05D006542 5.6e-269 931.4 1017 58.8
Hund23091 Selenicereus undatus HOM05D005351 ORTHO05D006542 1.7e-204 717.2 980 49.6
TAR626G0279 Trochodendron aralioides HOM05D005351 ORTHO05D006542 3.4e-133 480.3 1040 39.3
CSS0045517 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 9.3e-131 472.2 1029 40.5
CSS0029070 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 4.6e-130 469.9 1032 40.5
Cfa021891 Carpinus fangiana HOM05D005351 ORTHO05D006542 5.3e-126 456.4 1009 39.3
Haze_09867 Corylus avellana HOM05D005351 ORTHO05D006542 5.9e-125 453.0 1003 39.0
MD11G1037100 Malus domestica HOM05D005351 ORTHO05D006542 2.5e-123 447.6 999 38.2
Dinv40885 Davidia involucrata HOM05D005351 ORTHO05D006542 2.8e-119 434.1 968 39.0
TWI38G1324 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 1.2e-117 428.7 1025 38.6
Duzib213G0009 Durio zibethinus HOM05D005351 ORTHO05D006542 7.7e-117 426.0 1005 38.1
Sabra16G0244200 Salix brachista HOM05D005351 ORTHO05D006542 1.0e-116 425.6 1028 38.3
Nn1g02046 Nelumbo nucifera HOM05D005351 ORTHO05D006542 7.2e-115 419.5 1049 37.3
Gohir.D05G384000 Gossypium hirsutum HOM05D005351 ORTHO05D006542 2.7e-114 417.5 1004 37.9
Gohir.A04G005700 Gossypium hirsutum HOM05D005351 ORTHO05D006542 7.9e-114 416.0 998 38.0
TWI38G2212 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 7.9e-114 416.0 1035 37.6
Thecc.07G007900 Theobroma cacao HOM05D005351 ORTHO05D006542 1.0e-113 415.6 1018 38.1
Gorai.009G450800 Gossypium raimondii HOM05D005351 ORTHO05D006542 1.8e-113 414.8 1004 37.7
PGSC0003DMG400014404 Solanum tuberosum HOM05D005351 ORTHO05D006542 1.1e-112 412.1 1010 37.4
Lj8A180G96 Lonicera japonica HOM05D005351 ORTHO05D006542 2.6e-112 411.0 1009 39.0
Lj6g0009098 Lotus japonicus HOM05D005351 ORTHO05D006542 5.7e-112 409.8 1010 38.3
Nitab4.5_0003328g0090 Nicotiana tabacum HOM05D005351 ORTHO05D006542 4.8e-111 406.8 1004 37.8
FAN21G2745 Fragaria x ananassa HOM05D005351 ORTHO05D006542 2.4e-110 404.4 1010 37.5
Prupe.6G028400 Prunus persica HOM05D005351 ORTHO05D006542 2.4e-110 404.4 944 36.5
Nitab4.5_0005478g0030 Nicotiana tabacum HOM05D005351 ORTHO05D006542 1.0e-108 399.1 1001 37.2
FAN11G1247 Fragaria x ananassa HOM05D005351 ORTHO05D006542 2.9e-108 397.5 1010 37.4
Ca_12455_v3 Cicer arietinum L. HOM05D005351 ORTHO05D006542 1.4e-107 395.2 1002 37.4
Rhsim04G0010500 Rhododendron simsii HOM05D005351 ORTHO05D006542 2.5e-107 394.4 1121 36.2
FAN25G1298 Fragaria x ananassa HOM05D005351 ORTHO05D006542 5.5e-107 393.3 1019 36.9
Phvul.006G059260 Phaseolus vulgaris HOM05D005351 ORTHO05D006542 5.5e-107 393.3 1021 37.2
CAN.G492.50 Capsicum annuum HOM05D005351 ORTHO05D006542 1.2e-106 392.1 1003 37.2
Lalb_Chr15g0082311 Lupinus albus HOM05D005351 ORTHO05D006542 1.2e-106 392.1 1014 38.5
FAN16G2746 Fragaria x ananassa HOM05D005351 ORTHO05D006542 4.7e-106 390.2 1010 36.6
Migut.M01635 Erythranthe guttata HOM05D005351 ORTHO05D006542 5.2e-105 386.7 995 39.6
Medtr3g461030 Medicago truncatula HOM05D005351 ORTHO05D006542 5.2e-105 386.7 1015 36.9
MD03G1035400 Malus domestica HOM05D005351 ORTHO05D006542 2.6e-104 384.4 936 36.6
Actinidia03651 Actinidia chinensis HOM05D005351 ORTHO05D006542 1.3e-103 382.1 994 36.9
VMungo0540G1402 Vigna mungo HOM05D005351 ORTHO05D006542 4.8e-103 380.2 1019 36.9
TPR.G17956 Trifolium pratense HOM05D005351 ORTHO05D006542 1.1e-102 379.0 1014 37.9
MSTRG.15808 Avicennia marina HOM05D005351 ORTHO05D006542 1.4e-102 378.6 1014 38.1
SalBow8G3039 Salvia bowleyana HOM05D005351 ORTHO05D006542 2.4e-102 377.9 1005 37.0
Manes.01G003500 Manihot esculenta HOM05D005351 ORTHO05D006542 3.1e-102 377.5 1018 36.9
vmacro09623 Vaccinium macrocarpon HOM05D005351 ORTHO05D006542 1.0e-100 372.5 989 37.0
Cc05_g15290 Coffea canephora HOM05D005351 ORTHO05D006542 1.7e-100 371.7 1029 35.9
COL.COLO4_07741 Corchorus olitorius HOM05D005351 ORTHO05D006542 2.2e-100 371.3 1002 35.4
RcHm_v2.0_Chr5g0075571 Rosa chinensis HOM05D005351 ORTHO05D006542 8.5e-100 369.4 942 35.5
CsaV3_7G023840 Cucumis sativus L. HOM05D005351 ORTHO05D006542 5.5e-99 366.7 1023 35.7
DCAR_013254 Daucus carota HOM05D005351 ORTHO05D006542 7.2e-99 366.3 999 38.4
PSO210G4843 Papaver somniferum HOM05D005351 ORTHO05D006542 9.4e-99 365.9 985 37.1
Psat5g166400 Pisum sativum HOM05D005351 ORTHO05D006542 9.4e-99 365.9 1056 36.4
Sed0019267 Sechium edule HOM05D005351 ORTHO05D006542 1.6e-98 365.2 1018 35.3
Potri.001G371600 Populus trichocarpa HOM05D005351 ORTHO05D006542 8.8e-97 359.4 895 38.4
PGR083G0334 Punica granatum HOM05D005351 ORTHO05D006542 2.0e-96 358.2 1034 36.5
CiPaw.12G140700 Carya illinoinensis HOM05D005351 ORTHO05D006542 4.8e-95 353.6 819 38.7
Sc03g0011530 Simmondsia chinensis HOM05D005351 ORTHO05D006542 4.8e-95 353.6 717 43.7
PSO210G4950 Papaver somniferum HOM05D005351 ORTHO05D006542 6.3e-95 353.2 1000 37.1
Oeu049420.1 Olea europaea HOM05D005351 ORTHO05D006542 1.8e-94 351.7 1019 35.8
GSVIVG01014743001 Vitis vinifera HOM05D005351 ORTHO05D006542 5.3e-94 350.1 1012 31.9
QL08p002685 Quercus lobata HOM05D005351 ORTHO05D006542 9.1e-94 349.4 967 37.5
THA.LOC104815687 Tarenaya hassleriana HOM05D005351 ORTHO05D006542 7.7e-93 346.3 1016 34.4
Cpa.g.sc12.108 Carica papaya HOM05D005351 ORTHO05D006542 6.5e-92 343.2 975 33.2
Nn3g19476 Nelumbo nucifera HOM05D005351 ORTHO05D006542 2.3e-89 334.7 982 35.5
Carub.0003s1261 Capsella rubella HOM05D005351 ORTHO05D006542 1.5e-88 332.0 1002 34.2
HanXRQChr11g0334131 Helianthus annuus HOM05D005351 ORTHO05D006542 9.8e-88 329.3 993 34.4
Aqoxy1G04296 Aquilegia oxysepala HOM05D005351 ORTHO05D006542 1.7e-87 328.6 1031 33.6
Eucgr.F02026 Eucalyptus grandis HOM05D005351 ORTHO05D006542 1.7e-87 328.6 854 36.7
ATR0751G017 Amborella trichopoda HOM05D005351 ORTHO05D006542 7.0e-86 323.2 1054 33.4
SGA_v2.0_scaffold168G38576 Striga asiatica HOM05D005351 ORTHO05D006542 7.0e-86 323.2 812 38.5
Sp3g11430 Schrenkiella parvula HOM05D005351 ORTHO05D006542 1.7e-84 318.5 1014 34.1
Sopen10g001810 Solanum pennellii HOM05D005351 ORTHO05D006542 1.7e-84 318.5 939 34.7
AT3G13225 Arabidopsis thaliana HOM05D005351 ORTHO05D006542 3.8e-84 317.4 1013 33.6
MBI14_g37362_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 6.6e-84 316.6 998 35.4
Peaxi162Scf00018g00155 Petunia axillaris HOM05D005351 ORTHO05D006542 6.6e-84 316.6 857 36.2
Dinv10362 Davidia involucrata HOM05D005351 ORTHO05D006542 1.9e-83 315.1 887 35.9
Solyc10g005850.4 Solanum lycopersicum HOM05D005351 ORTHO05D006542 7.2e-83 313.2 925 34.9
arahy.Tifrunner.gnm1.ann1.1R5J8M Arachis hypogaea HOM05D005351 ORTHO05D006542 1.6e-82 312.0 986 35.9
Glyma.08G332700 Glycine max HOM05D005351 ORTHO05D006542 2.8e-82 311.2 913 35.2
FvH4_3g42241 Fragaria vesca HOM05D005351 ORTHO05D006542 2.3e-81 308.1 938 35.5
ECA236G3149 Erigeron canadensis HOM05D005351 ORTHO05D006542 8.9e-81 306.2 980 32.3
Atru.chr2.3836 Acer truncatum HOM05D005351 ORTHO05D006542 2.8e-79 301.2 748 37.7
Glyma.18G074300 Glycine max HOM05D005351 ORTHO05D006542 2.4e-78 298.1 912 34.6
CANSAT11G0508 Cannabis sativa HOM05D005351 ORTHO05D006542 2.0e-77 295.0 840 34.4
BcaC09g48295 Brassica carinata HOM05D005351 ORTHO05D006542 4.5e-77 293.9 990 33.7
Ciclev10007493m.g Citrus clementina HOM05D005351 ORTHO05D006542 1.3e-76 292.4 839 35.5
BcaB04g21006 Brassica carinata HOM05D005351 ORTHO05D006542 3.9e-76 290.8 1009 32.3
SEGI_31992 Sequoiadendron giganteum HOM05D005351 ORTHO05D006542 5.6e-75 287.0 1110 31.3
BolC1t05130H Brassica oleracea HOM05D005351 ORTHO05D006542 7.3e-75 286.6 997 33.5
Os06g0298400 Oryza sativa ssp. japonica HOM05D005351 ORTHO05D006542 7.3e-75 286.6 1018 34.6
unitig_0.g707 Utricularia gibba HOM05D005351 ORTHO05D006542 1.0e-73 282.7 1007 32.0
arahy.Tifrunner.gnm1.ann1.LDHF9L Arachis hypogaea HOM05D005351 ORTHO05D006542 2.3e-73 281.6 986 34.8
BraA01t04066Z Brassica rapa HOM05D005351 ORTHO05D006542 2.3e-73 281.6 1021 32.6
CDE05G2589 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 4.0e-73 280.8 998 31.8
HPP92_017874 Vanilla planifolia HOM05D005351 ORTHO05D006542 8.9e-73 279.6 969 34.1
ClCG09G021540 Citrullus lanatus HOM05D005351 ORTHO05D006542 5.8e-72 276.9 1021 31.8
Hma1.2p1_0193F.1_g083920 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 2.9e-71 274.6 1078 32.6
Zm00001eb381020 Zea mays HOM05D005351 ORTHO05D006542 2.3e-68 265.0 997 32.6
Thhalv10020110m.g Eutrema salsugineum HOM05D005351 ORTHO05D006542 7.3e-67 260.0 880 33.2
MELO3C024969.2 Cucumis melo HOM05D005351 ORTHO05D006542 9.5e-67 259.6 919 33.1
Aa31LG8G460 Aethionema arabicum HOM05D005351 ORTHO05D006542 3.6e-66 257.7 1035 31.7
C01p51820 Brassica napus HOM05D005351 ORTHO05D006542 1.5e-64 252.3 938 32.8
AL3G25030 Arabidopsis lyrata HOM05D005351 ORTHO05D006542 2.2e-63 248.4 818 31.5
A01p40300 Brassica napus HOM05D005351 ORTHO05D006542 4.1e-62 244.2 944 31.8
Lsat_1_v5_gn_7_114900 Lactuca sativa HOM05D005351 ORTHO05D006542 7.6e-56 223.4 1075 29.8
CARHR087840 Cardamine hirsuta HOM05D005351 ORTHO05D006542 1.6e-53 215.7 815 30.9
Zm00001eb281160 Zea mays HOM05D005351 ORTHO05D006542 3.6e-50 204.5 990 30.4
CDE05G0998 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 8.9e-49 199.9 973 29.6
PSO782G2183 Papaver somniferum HOM05D005351 ORTHO05D006542 6.0e-45 187.2 155 67.1
Oeu017994.1 Olea europaea HOM05D005351 ORTHO05D006542 4.9e-39 167.5 152 64.5
CSS0030315 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.8e-33 149.1 399 35.6
CSS0028997 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.2e-32 146.4 390 35.6
MBI14_g27041_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 7.6e-32 143.7 136 59.6
SMO164G0196 Selaginella moellendorffii HOM05D005351 ORTHO05D006542 3.3e-27 128.3 157 50.3
CBR_g12012 Chara braunii HOM05D005351 ORTHO05D006542 6.2e-26 124.0 308 38.3
AagrBONN_evm.TU.Sc2ySwM_368.1722__1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 1.2e-21 109.8 1102 25.6
HPP92_028497 Vanilla planifolia HOM05D005351 ORTHO05D006542 3.5e-21 108.2 161 45.3
Hma1.2p1_3473F.1_g336230 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 1.8e-20 105.9 101 64.4
vmacro11082 Vaccinium macrocarpon HOM05D000009 ORTHO05D006542 1.9e-19 102.4 98 62.2
Actinidia00844 Actinidia chinensis HOM05D005351 ORTHO05D006542 1.3e-18 99.8 286 36.0
Dinv10361 Davidia involucrata HOM05D005351 ORTHO05D006542 9.0e-17 93.6 73 64.4
Lsat_1_v5_gn_6_88041 Lactuca sativa HOM05D005351 ORTHO05D006542 1.2e-16 93.2 213 35.7
Pp3c7_8580 Physcomitrium patens HOM05D005351 ORTHO05D006542 1.1e-14 86.7 1042 22.1
CiPaw.12G140800 Carya illinoinensis HOM05D005351 ORTHO05D006542 7.1e-14 84.0 128 45.3
Hma1.2p1_3473F.1_g336240 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 7.1e-14 84.0 289 35.3
AagrBONN_evm.TU.Sc2ySwM_368.1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 2.1e-13 82.4 118 51.7
Peaxi162Scf00018g00154 Petunia axillaris HOM05D005351 ORTHO05D006542 1.3e-12 79.7 60 71.7
Solyc10g005860.3 Solanum lycopersicum HOM05D005351 ORTHO05D006542 6.7e-12 77.4 60 71.7
Cre09.g388430 Chlamydomonas reinhardtii HOM05D005351 ORTHO05D006542 5.9e-08 64.3 188 31.4


User provided reference genes

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