Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62035626 Chenopodium quinoa HOM05D001729 ORTHO05D001155 8.8e-226 786.6 382 100.0
AUR62035625 Chenopodium quinoa HOM05D001729 ORTHO05D001155 5.0e-128 461.8 383 66.1
AUR62006002 Chenopodium quinoa HOM05D001729 ORTHO05D001155 7.4e-23 112.5 388 29.9
AUR62035624 Chenopodium quinoa HOM05D001729 ORTHO05D001155 1.8e-21 107.8 413 28.1
Sopen10g002860 Solanum pennellii HOM05D008898 ORTHO05D001155 3.0e-16 90.5 371 29.9
AUR62006001 Chenopodium quinoa HOM05D001729 ORTHO05D001155 2.5e-15 87.4 390 26.4
QL07p019801 Quercus lobata HOM05D001729 ORTHO05D001155 9.7e-15 85.5 405 28.9
FAN14G2874 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.8e-14 83.2 419 25.8
FvH4_6g01541 Fragaria vesca HOM05D001729 ORTHO05D001155 1.4e-13 81.6 416 25.0
PGSC0003DMG400025009 Solanum tuberosum HOM05D008898 ORTHO05D001155 1.4e-13 81.6 386 28.5
FAN14G1187 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.1e-13 80.5 407 25.8
Migut.L01260 Erythranthe guttata HOM05D001729 ORTHO05D001155 2.0e-12 77.8 389 23.1
FvH4_6g02171 Fragaria vesca HOM05D001729 ORTHO05D001155 3.4e-12 77.0 385 24.7
FAN02G0048 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.4e-12 77.0 404 23.8
FAN02G0583 Fragaria x ananassa HOM05D001729 ORTHO05D001155 4.5e-12 76.6 380 25.5
FAN05G1447 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.7e-11 74.7 377 24.4
Nitab4.5_0002383g0130 Nicotiana tabacum HOM05D008898 ORTHO05D001155 2.2e-11 74.3 389 24.9
FAN09G2508 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.9e-11 73.9 384 24.0
Sabra09G0102700 Salix brachista HOM05D001729 ORTHO05D001155 5.0e-11 73.2 392 23.7
HanXRQChr17g0547181 Helianthus annuus HOM05D008898 ORTHO05D001155 6.5e-11 72.8 231 28.6
QL05p012608 Quercus lobata HOM05D001729 ORTHO05D001155 2.5e-10 70.9 389 25.4
QL07p036134 Quercus lobata HOM05D001729 ORTHO05D001155 3.2e-10 70.5 395 26.6
PGSC0003DMG400005639 Solanum tuberosum HOM05D001729 ORTHO05D001155 3.2e-10 70.5 387 24.3
QL05p012667 Quercus lobata HOM05D001729 ORTHO05D001155 4.2e-10 70.1 371 25.1
FAN14G0866 Fragaria x ananassa HOM05D001729 ORTHO05D001155 5.5e-10 69.7 411 23.6
Glyma.09G075900 Glycine max HOM05D001729 ORTHO05D001155 5.5e-10 69.7 425 23.5
RcHm_v2.0_Chr3g0449911 Rosa chinensis HOM05D001729 ORTHO05D001155 5.5e-10 69.7 392 25.5
RcHm_v2.0_Chr5g0018111 Rosa chinensis HOM05D001729 ORTHO05D001155 5.5e-10 69.7 414 22.9
MD05G1244200 Malus domestica HOM05D001729 ORTHO05D001155 7.2e-10 69.3 431 22.5
QL05p065010 Quercus lobata HOM05D001729 ORTHO05D001155 7.2e-10 69.3 390 26.9
FAN05G3901 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.2e-09 68.6 377 23.6
Medtr4g124160 Medicago truncatula HOM05D001729 ORTHO05D001155 1.2e-09 68.6 417 25.2
PGSC0003DMG400005638 Solanum tuberosum HOM05D001729 ORTHO05D001155 1.2e-09 68.6 381 25.7
FAN14G5781 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.1e-09 67.8 387 23.5
Phvul.009G222800 Phaseolus vulgaris HOM05D001729 ORTHO05D001155 2.1e-09 67.8 421 25.4
QL02p054283 Quercus lobata HOM05D001729 ORTHO05D001155 2.1e-09 67.8 399 24.6
Sabra09G0127200 Salix brachista HOM05D001729 ORTHO05D001155 3.6e-09 67.0 375 24.8
Sc19g0000590 Simmondsia chinensis HOM05D001729 ORTHO05D001155 4.6e-09 66.6 393 23.2
Medtr4g007240 Medicago truncatula HOM05D012242 ORTHO05D001155 6.1e-09 66.2 383 27.4
Sc19g0001870 Simmondsia chinensis HOM05D001729 ORTHO05D001155 6.1e-09 66.2 315 22.9
QL06p006111 Quercus lobata HOM05D001729 ORTHO05D001155 7.9e-09 65.9 402 23.4
Duzib168G0815 Durio zibethinus HOM05D002420 ORTHO05D002422 1.0e-08 65.5 376 21.8
FAN14G3807 Fragaria x ananassa HOM05D001729 ORTHO05D001155 2.3e-08 64.3 413 22.5
VMungo1309G0868 Vigna mungo HOM05D001729 ORTHO05D001155 3.9e-08 63.5 414 24.2
QL05p014501 Quercus lobata HOM05D001729 ORTHO05D001155 5.1e-08 63.2 381 24.1
Rhsim08G0219900 Rhododendron simsii HOM05D001729 ORTHO05D001155 6.7e-08 62.8 389 25.4
Hund15878 Selenicereus undatus HOM05D001729 ORTHO05D001155 6.7e-08 62.8 395 24.1
AUR62016246 Chenopodium quinoa HOM05D007162 ORTHO05D007631 1.5e-07 61.6 370 23.8
QL05p074214 Quercus lobata HOM05D001729 ORTHO05D001155 1.5e-07 61.6 373 25.7
FAN08G1373 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.3e-07 60.5 308 27.9
MD04G1180900 Malus domestica HOM05D001729 ORTHO05D001155 4.3e-07 60.1 115 35.7
Potri.009G132400 Populus trichocarpa HOM05D001729 ORTHO05D001155 4.3e-07 60.1 388 22.7
QL05p052800 Quercus lobata HOM05D001729 ORTHO05D001155 4.3e-07 60.1 404 23.0
QL07p036300 Quercus lobata HOM05D001729 ORTHO05D001155 7.4e-07 59.3 405 25.9
Rhsim08G0238800 Rhododendron simsii HOM05D001729 ORTHO05D001155 7.4e-07 59.3 408 24.5
RcHm_v2.0_Chr5g0081211 Rosa chinensis HOM05D001729 ORTHO05D001155 7.4e-07 59.3 248 28.2
FAN18G1542 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-06 58.5 428 24.5
FAN18G4057 Fragaria x ananassa HOM05D001729 ORTHO05D001155 1.3e-06 58.5 428 24.5
Medtr8g102000 Medicago truncatula HOM05D012242 ORTHO05D001155 1.3e-06 58.5 373 25.2
SGA_v2.0_scaffold232G43501 Striga asiatica HOM05D001729 ORTHO05D001155 1.3e-06 58.5 373 24.4
QL07p036320 Quercus lobata HOM05D001729 ORTHO05D001155 2.2e-06 57.8 399 25.8
SGA_v2.0_scaffold1G00761 Striga asiatica HOM05D001729 ORTHO05D001155 2.8e-06 57.4 377 24.1
FAN02G4556 Fragaria x ananassa HOM05D001729 ORTHO05D001155 3.7e-06 57.0 154 29.2
PSO478G1029 Papaver somniferum HOM05D000007 ORTHO05D000676 3.7e-06 57.0 281 25.6
QL04p013515 Quercus lobata HOM05D002420 ORTHO05D002422 3.7e-06 57.0 362 20.4
COL.COLO4_30694 Corchorus olitorius HOM05D001729 ORTHO05D001155 4.8e-06 56.6 205 29.8
Lj4g0002979 Lotus japonicus HOM05D001729 ORTHO05D001155 6.3e-06 56.2 418 24.4
FAN24G2684 Fragaria x ananassa HOM05D001729 ORTHO05D001155 8.2e-06 55.8 409 22.7
Psat4g020960 Pisum sativum HOM05D001729 ORTHO05D001155 8.2e-06 55.8 407 23.3
RcHm_v2.0_Chr6g0275871 Rosa chinensis HOM05D001729 ORTHO05D001155 8.2e-06 55.8 264 24.6


User provided reference genes

Program Settings