Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62035479 Chenopodium quinoa HOM05D031768 ORTHO05D003213 1.2e-73 279.6 132 100.0
AUR62042679 Chenopodium quinoa HOM05D007123 ORTHO05D000233 2.4e-37 159.1 134 59.0
AUR62013488 Chenopodium quinoa HOM05D031768 ORTHO05D003213 9.0e-37 157.1 104 73.1
AUR62042301 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.2e-30 136.0 133 48.9
AUR62040393 Chenopodium quinoa HOM05D007123 ORTHO05D000233 2.4e-29 132.5 133 48.9
EL10Ac6g14466 Beta vulgaris HOM05D007123 ORTHO05D003213 1.5e-28 129.8 119 53.8
AUR62038926 Chenopodium quinoa HOM05D007123 ORTHO05D010541 3.4e-28 128.6 109 57.8
AUR62024141 Chenopodium quinoa HOM05D007123 ORTHO05D003213 6.5e-27 124.4 120 51.7
EL10Ac4g08550 Beta vulgaris HOM05D007123 ORTHO05D000233 1.4e-26 123.2 135 47.4
AUR62041429 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.6e-25 118.6 112 52.7
EL10Ac7g17430 Beta vulgaris HOM05D007123 ORTHO05D000233 1.4e-24 116.7 131 47.3
AUR62041179 Chenopodium quinoa HOM05D007123 ORTHO05D003213 1.8e-24 116.3 117 49.6
EL10Ac8g19929 Beta vulgaris HOM05D007123 ORTHO05D003213 2.6e-23 112.5 81 60.5
EL10Ac5g11297 Beta vulgaris HOM05D007123 ORTHO05D000233 1.3e-22 110.2 82 59.8
EL10Ac7g17392 Beta vulgaris HOM05D007123 ORTHO05D003213 6.3e-22 107.8 105 50.5
EL10Ac2g03482 Beta vulgaris HOM05D007123 ORTHO05D000233 1.4e-21 106.7 133 46.6
EL10Ac7g17507 Beta vulgaris HOM05D007123 ORTHO05D003213 1.8e-21 106.3 78 59.0
EL10Ac9g22337 Beta vulgaris HOM05D007123 ORTHO05D003213 6.7e-16 87.8 68 57.4
HanXRQChr14g0441971 Helianthus annuus HOM05D000107 ORTHO05D000062 4.8e-14 81.6 131 35.1
EL10Ac7g17152 Beta vulgaris HOM05D007123 ORTHO05D010541 5.3e-13 78.2 124 41.1
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 1.6e-12 76.6 93 40.9
AUR62042681 Chenopodium quinoa HOM05D031768 ORTHO05D003213 2.0e-12 76.3 44 86.4
Atru.chr1.1855 Acer truncatum HOM05D000107 ORTHO05D000062 3.5e-12 75.5 134 35.1
Ca_02256_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.5e-12 75.1 137 35.0
Ca_14973_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 4.5e-12 75.1 137 35.0
TAR110G0001 Trochodendron aralioides HOM05D000107 ORTHO05D003213 8.5e-11 70.9 99 37.4
TWI32G1228 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.5e-10 69.3 131 32.1
CsaV3_1G024200 Cucumis sativus L. HOM05D000107 ORTHO05D000062 3.2e-10 68.9 135 31.9
AUR62035502 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.2e-10 68.6 123 30.9
CsaV3_6G019030 Cucumis sativus L. HOM05D000107 ORTHO05D003213 5.5e-10 68.2 111 33.3
CsaV3_6G032210 Cucumis sativus L. HOM05D000107 ORTHO05D003213 5.5e-10 68.2 111 33.3
MBI13_g16081_MAGBIO Magnolia biondii HOM05D003464 ORTHO05D003170 5.5e-10 68.2 142 31.0
EL10Ac2g03082 Beta vulgaris HOM05D000107 ORTHO05D003213 9.4e-10 67.4 76 38.2
Ciclev10013614m.g Citrus clementina HOM05D000107 ORTHO05D000062 1.2e-09 67.0 123 30.1
CsaV3_7G011410 Cucumis sativus L. HOM05D000107 ORTHO05D003213 1.2e-09 67.0 111 33.3
MBI11_g22671_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.2e-09 67.0 105 34.3
Ciclev10030123m.g Citrus clementina HOM05D000107 ORTHO05D000062 2.1e-09 66.2 89 36.0
PGSC0003DMG400018891 Solanum tuberosum HOM05D000107 ORTHO05D003213 2.1e-09 66.2 108 32.4
EL10Ac8g19688 Beta vulgaris HOM05D000107 ORTHO05D003213 2.7e-09 65.9 132 29.5
AUR62038589 Chenopodium quinoa HOM05D000107 ORTHO05D000233 2.7e-09 65.9 117 33.3
Hma1.2p1_2133F.1_g314790 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 2.7e-09 65.9 88 36.4
Lj1g0023677 Lotus japonicus HOM05D000107 ORTHO05D003213 2.7e-09 65.9 81 34.6
Peaxi162Scf00106g00075 Petunia axillaris HOM05D000107 ORTHO05D003213 2.7e-09 65.9 83 39.8
CsaV3_1G031320 Cucumis sativus L. HOM05D000107 ORTHO05D003213 3.6e-09 65.5 108 33.3
AUR62040877 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.7e-09 65.1 123 31.7
Ciclev10003481m.g Citrus clementina HOM05D000107 ORTHO05D003213 4.7e-09 65.1 74 43.2
FvH4_4g10471 Fragaria vesca HOM05D000107 ORTHO05D000062 4.7e-09 65.1 83 37.3
MBI08_g15727_MAGBIO Magnolia biondii HOM05D000107 ORTHO05D003213 6.1e-09 64.7 76 40.8
EL10Ac4g08668 Beta vulgaris HOM05D000107 ORTHO05D000062 8.0e-09 64.3 124 30.6
FvH4_5g37211 Fragaria vesca HOM05D000107 ORTHO05D003213 1.0e-08 63.9 101 38.6
MBI06_g42454_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D003213 1.0e-08 63.9 123 31.7
Aqoxy3G01844 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 1.4e-08 63.5 137 32.8
CAN.G172.3 Capsicum annuum HOM05D022282 ORTHO05D017747 1.4e-08 63.5 79 38.0
MBI19_g30599_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.4e-08 63.5 109 32.1
SHI03580 Sapria himalayana HOM05D000616 ORTHO05D000233 1.4e-08 63.5 131 30.5
SHI46859 Sapria himalayana HOM05D000107 ORTHO05D000062 1.4e-08 63.5 131 31.3
EL10Ac6g14204 Beta vulgaris HOM05D000107 ORTHO05D003213 2.3e-08 62.8 124 29.8
MBI17_g17142_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.3e-08 62.8 109 30.3
Aqoxy1G03594 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 3.0e-08 62.4 132 29.5
Aqoxy1G04143 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 3.0e-08 62.4 132 29.5
Aqoxy4G01545 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 3.0e-08 62.4 132 29.5
PSO478G3651 Papaver somniferum HOM05D000107 ORTHO05D000062 4.0e-08 62.0 132 30.3
Rhsim01G0072500 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.2e-08 61.6 106 32.1
Rhsim01G0178900 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.2e-08 61.6 77 35.1
TPR.G36035 Trifolium pratense HOM05D000107 ORTHO05D000062 5.2e-08 61.6 129 28.7
Aqoxy2G01329 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 6.7e-08 61.2 137 28.5
Hma1.2p1_0555F.1_g178040 Hydrangea macrophylla HOM05D000107 ORTHO05D003213 6.7e-08 61.2 110 28.2
Oeu017730.1 Olea europaea HOM05D000107 ORTHO05D003213 6.7e-08 61.2 79 35.4
Rhsim04G0055300 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.7e-08 61.2 84 36.9
TPR.G7880 Trifolium pratense HOM05D000107 ORTHO05D000062 6.7e-08 61.2 87 39.1
Rhsim09G0096400 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.8e-08 60.8 137 32.1
Oeu017731.1 Olea europaea HOM05D000107 ORTHO05D003213 1.5e-07 60.1 79 36.7
Oeu017732.1 Olea europaea HOM05D000107 ORTHO05D003213 1.5e-07 60.1 79 36.7
PSO782G5344 Papaver somniferum HOM05D000107 ORTHO05D000062 1.5e-07 60.1 123 31.7
AUR62035492 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.0e-07 59.7 73 45.2
Peaxi162Scf00168g00124 Petunia axillaris HOM05D000107 ORTHO05D003213 2.0e-07 59.7 129 31.8
CSS0018002 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.6e-07 59.3 77 40.3
CSS0028705 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.6e-07 59.3 77 40.3
CSS0031171 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.6e-07 59.3 77 40.3
CSS0047073 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.6e-07 59.3 77 40.3
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 2.6e-07 59.3 83 36.1
AUR62040142 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.6e-07 59.3 44 68.2
MBI14_g25730_MAGBIO Magnolia biondii HOM05D003464 ORTHO05D003170 2.6e-07 59.3 77 36.4
Rhsim12G0007200 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.3e-07 58.9 124 32.3
Aqoxy2G01141 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 4.4e-07 58.5 77 36.4
Os07g0516500 Oryza sativa ssp. japonica HOM05D032447 ORTHO05D003213 4.4e-07 58.5 133 32.3
CSS0036122 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.7e-07 58.2 77 39.0
Oeu041133.1 Olea europaea HOM05D000107 ORTHO05D000568 5.7e-07 58.2 58 44.8
Psat0s4310g0040 Pisum sativum HOM05D000107 ORTHO05D031396 5.7e-07 58.2 112 33.0
Psat1g138160 Pisum sativum HOM05D000107 ORTHO05D000062 5.7e-07 58.2 112 33.0
TAR230G0001 Trochodendron aralioides HOM05D000107 ORTHO05D003213 5.7e-07 58.2 123 33.3
Migut.K00946 Erythranthe guttata HOM05D000107 ORTHO05D003213 7.5e-07 57.8 133 31.6
Rhsim01G0019000 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.5e-07 57.8 138 27.5
CANSAT78G1485 Cannabis sativa HOM05D000107 ORTHO05D000062 9.7e-07 57.4 132 29.5
PSO135G0675 Papaver somniferum HOM05D000107 ORTHO05D000062 9.7e-07 57.4 114 32.5
PSO198G0028 Papaver somniferum HOM05D000107 ORTHO05D000062 9.7e-07 57.4 114 32.5
Sopen11g015680 Solanum pennellii HOM05D000648 ORTHO05D000568 9.7e-07 57.4 118 33.1
TAR049G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 9.7e-07 57.4 88 36.4
CANSAT56G1321 Cannabis sativa HOM05D024511 ORTHO05D003213 1.3e-06 57.0 119 26.9
Lalb_Chr20g0115001 Lupinus albus HOM05D000107 ORTHO05D000062 1.3e-06 57.0 117 29.9
PSO017G0018 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO017G3036 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO017G3574 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO017G4888 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO063G6357 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO170G2938 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO170G5037 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO210G4007 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO210G7634 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO339G1393 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO339G1437 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO339G6051 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO384G2035 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO384G2963 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 136 30.1
PSO384G3206 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO421G0292 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO423G0095 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO675G0159 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO675G7509 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO675G7986 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO724G0904 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO781G0202 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO832G4110 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
PSO832G4442 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-06 57.0 114 32.5
RcHm_v2.0_Chr3g0495641 Rosa chinensis HOM05D000107 ORTHO05D003213 1.3e-06 57.0 75 36.0
MBI19_g40227_MAGBIO Magnolia biondii HOM05D003464 ORTHO05D003170 1.7e-06 56.6 77 36.4
Oeu062448.1 Olea europaea HOM05D000107 ORTHO05D003213 1.7e-06 56.6 111 30.6
PSO541G4511 Papaver somniferum HOM05D000107 ORTHO05D000062 1.7e-06 56.6 114 32.5
Rhsim01G0128800 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-06 56.6 141 28.4
CANSAT56G2086 Cannabis sativa HOM05D024511 ORTHO05D003213 2.2e-06 56.2 119 26.9
CsaV3_1G029970 Cucumis sativus L. HOM05D000107 ORTHO05D003213 2.2e-06 56.2 68 38.2
CsaV3_5G015090 Cucumis sativus L. HOM05D000107 ORTHO05D003213 2.2e-06 56.2 68 38.2
Os04g0128300 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D003213 2.8e-06 55.8 106 30.2
Hma1.2p1_0218F.1_g092670 Hydrangea macrophylla HOM05D000107 ORTHO05D003213 3.7e-06 55.5 97 26.8
PSO339G2651 Papaver somniferum HOM05D000107 ORTHO05D000062 3.7e-06 55.5 114 31.6
TPR.G12918 Trifolium pratense HOM05D000107 ORTHO05D000062 3.7e-06 55.5 129 30.2
Ah.10g024720 Amaranthus hybridus HOM05D000107 ORTHO05D000062 4.8e-06 55.1 118 33.1
MBI02_g40794_MAGBIO Magnolia biondii HOM05D007906 ORTHO05D010248 4.8e-06 55.1 142 28.9
PSO782G1859 Papaver somniferum HOM05D000107 ORTHO05D000062 6.3e-06 54.7 114 30.7
Psat3g162080 Pisum sativum HOM05D000107 ORTHO05D003213 6.3e-06 54.7 86 36.0
TAR344G0003 Trochodendron aralioides HOM05D000107 ORTHO05D000062 6.3e-06 54.7 123 31.7
Atru.chr13.1787 Acer truncatum HOM05D000107 ORTHO05D003213 8.2e-06 54.3 76 36.8
Atru.chr13.1791 Acer truncatum HOM05D000107 ORTHO05D003213 8.2e-06 54.3 76 36.8


User provided reference genes

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