Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 1.2e-75 286.2 126 100.0
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 1.2e-75 286.2 126 100.0
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 2.9e-61 238.4 125 81.6
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.0e-58 229.9 124 76.6
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 6.8e-58 227.3 124 75.0
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 1.3e-56 223.0 123 74.0
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 1.7e-56 222.6 124 71.8
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 2.2e-56 222.2 124 71.8
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 4.9e-56 221.1 124 72.6
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 6.4e-56 220.7 124 70.2
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 8.3e-56 220.3 124 71.0
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.8e-55 219.2 123 70.7
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 4.1e-55 218.0 124 69.4
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 4.1e-55 218.0 124 69.4
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 2.0e-54 215.7 123 70.7
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 2.7e-54 215.3 124 67.7
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 7.8e-54 213.8 124 70.2
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 3.9e-53 211.5 122 68.0
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 8.6e-53 210.3 124 69.4
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 1.9e-52 209.1 125 68.8
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 2.5e-52 208.8 124 69.4
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 3.3e-52 208.4 123 65.0
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 4.3e-52 208.0 124 68.5
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 9.5e-52 206.8 123 69.9
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 4.7e-51 204.5 124 66.1
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 1.0e-50 203.4 121 66.9
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 1.4e-50 203.0 118 72.0
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 1.8e-50 202.6 124 66.9
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 2.3e-50 202.2 123 67.5
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 3.1e-50 201.8 123 67.5
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 3.1e-50 201.8 124 68.5
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 5.2e-50 201.1 124 69.4
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 6.8e-50 200.7 124 63.7
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 8.9e-50 200.3 123 67.5
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 8.9e-50 200.3 127 63.8
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 1.5e-49 199.5 124 65.3
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 1.5e-49 199.5 124 65.3
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 2.0e-49 199.1 129 62.8
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 4.4e-49 198.0 138 60.1
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 9.8e-49 196.8 122 65.6
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 2.2e-48 195.7 125 63.2
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 3.7e-48 194.9 124 62.9
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 6.4e-48 194.1 130 62.3
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 1.1e-47 193.4 130 63.1
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 9.2e-47 190.3 108 73.1
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 2.7e-46 188.7 123 63.4
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 6.0e-46 187.6 124 60.5
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 6.0e-46 187.6 124 59.7
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 1.7e-45 186.0 120 65.8
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 1.1e-44 183.3 124 61.3
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 1.5e-44 183.0 106 70.8
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 1.5e-44 183.0 106 68.9
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 3.3e-44 181.8 123 58.5
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 3.3e-44 181.8 111 64.0
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 1.1e-42 176.8 107 69.2
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 1.4e-42 176.4 104 71.2
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 1.4e-42 176.4 103 70.9
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 1.5e-41 172.9 103 68.0
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 2.6e-41 172.2 109 67.0
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 3.5e-38 161.8 124 54.8
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 5.1e-37 157.9 103 63.1
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 9.5e-36 153.7 98 62.2
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 1.2e-35 153.3 102 60.8
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 8.1e-35 150.6 98 63.3
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 5.2e-34 147.9 84 72.6
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.7e-32 142.9 128 50.0
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 1.1e-31 140.2 73 80.8
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.4e-31 139.8 125 50.4
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 1.2e-27 126.7 76 68.4
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 5.4e-23 111.3 117 42.7
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 7.8e-22 107.5 61 70.5
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 8.7e-21 104.0 109 45.0
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 5.6e-20 101.3 58 69.0
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 6.2e-19 97.8 55 69.1
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 3.1e-18 95.5 118 38.1
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 6.9e-18 94.4 91 47.3
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 4.2e-15 85.1 119 32.8
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 7.9e-14 80.9 112 33.9
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 2.2e-08 62.8 38 68.4
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 1.9e-07 59.7 162 25.3


User provided reference genes

Program Settings