Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.3e-146 523.1 278 100.0
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.8e-140 502.7 278 94.6
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 3.5e-115 418.7 277 80.9
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 4.2e-108 395.2 269 75.8
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 3.1e-103 379.0 268 71.6
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 5.3e-103 378.3 273 69.2
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 6.9e-103 377.9 274 69.7
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 3.4e-102 375.6 277 70.4
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 5.8e-102 374.8 276 68.8
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 1.3e-101 373.6 275 70.5
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 2.9e-101 372.5 281 67.3
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 3.8e-101 372.1 278 69.1
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 2.4e-100 369.4 278 69.4
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 2.4e-100 369.4 273 68.9
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 2.4e-100 369.4 268 71.6
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 3.2e-100 369.0 278 69.4
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 3.2e-100 369.0 268 71.3
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 3.2e-100 369.0 269 68.8
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 4.2e-100 368.6 280 67.1
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 4.2e-100 368.6 276 69.6
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 5.4e-100 368.2 275 69.5
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 5.4e-100 368.2 273 68.9
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 5.4e-100 368.2 277 67.5
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 1.6e-99 366.7 275 67.3
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 1.6e-99 366.7 273 68.5
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 1.6e-99 366.7 276 68.1
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 2.7e-99 365.9 275 66.5
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 3.5e-99 365.5 273 68.5
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 4.6e-99 365.2 273 68.5
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 6.0e-99 364.8 267 70.8
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 7.8e-99 364.4 274 70.1
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.0e-98 364.0 275 67.3
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.0e-98 364.0 275 66.9
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 1.3e-98 363.6 272 68.8
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 1.3e-98 363.6 273 67.8
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 1.7e-98 363.2 273 68.1
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 3.0e-98 362.5 270 68.9
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 8.7e-98 360.9 267 68.2
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 1.5e-97 360.1 274 65.7
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 3.3e-97 359.0 278 66.9
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 5.6e-97 358.2 277 66.1
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 7.3e-97 357.8 272 68.4
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 9.6e-97 357.5 278 67.6
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 1.6e-96 356.7 277 65.7
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 1.6e-96 356.7 272 66.9
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 8.1e-96 354.4 276 65.9
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 8.1e-96 354.4 270 65.9
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 1.1e-95 354.0 276 65.6
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 1.8e-95 353.2 274 67.9
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 3.1e-95 352.4 272 66.2
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 5.3e-95 351.7 273 65.6
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 5.3e-95 351.7 276 65.9
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 5.8e-94 348.2 278 62.9
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 7.6e-94 347.8 272 66.9
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 9.9e-94 347.4 268 66.4
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 1.3e-93 347.1 276 64.5
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 1.3e-93 347.1 273 64.8
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 1.3e-93 347.1 273 64.8
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 1.3e-93 347.1 273 65.2
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 1.7e-93 346.7 273 65.2
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 2.2e-93 346.3 273 64.5
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 2.9e-93 345.9 278 64.7
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 2.9e-93 345.9 272 65.1
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 3.8e-93 345.5 271 66.4
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 3.8e-93 345.5 331 58.6
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 3.8e-93 345.5 282 65.2
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 8.4e-93 344.4 273 64.8
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 1.1e-92 344.0 278 65.5
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 1.4e-92 343.6 277 64.6
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 1.9e-92 343.2 277 64.3
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 2.7e-91 339.3 277 65.0
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 3.5e-91 339.0 276 64.9
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 2.3e-90 336.3 274 66.1
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 1.5e-89 333.6 269 65.1
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 1.5e-89 333.6 267 64.8
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 2.5e-89 332.8 279 61.6
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 3.3e-89 332.4 276 63.8
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 7.4e-89 331.3 243 68.7
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 1.3e-88 330.5 278 61.2
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 1.6e-88 330.1 267 64.8
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 1.4e-87 327.0 276 59.8
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 1.4e-87 327.0 270 62.6
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 3.1e-87 325.9 241 69.7
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 2.2e-85 319.7 225 72.4
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 4.2e-84 315.5 268 61.2
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 3.5e-83 312.4 267 60.3
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 3.9e-82 308.9 268 58.6
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 5.6e-81 305.1 237 70.5
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 9.6e-81 304.3 234 66.2
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 1.4e-79 300.4 294 55.8
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 5.3e-79 298.5 240 65.0
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 1.7e-77 293.5 267 58.1
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 4.9e-77 292.0 240 62.9
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 8.4e-77 291.2 267 57.7
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 1.9e-76 290.0 224 68.3
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 2.5e-76 289.7 232 64.2
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 2.1e-75 286.6 274 53.6
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 3.5e-75 285.8 390 44.1
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 6.0e-75 285.0 268 53.7
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 3.9e-74 282.3 266 59.0
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 5.7e-73 278.5 258 53.9
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.1e-68 264.2 278 54.3
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 5.3e-63 245.4 272 51.8
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 2.6e-57 226.5 266 47.7
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 3.2e-52 209.5 188 61.2
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 4.2e-52 209.1 149 71.8
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 2.6e-49 199.9 220 51.8
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.1e-44 184.5 147 65.3
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 8.0e-43 178.3 167 59.3
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 1.2e-41 174.5 218 45.9
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 1.8e-39 167.2 139 59.7
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 7.7e-38 161.8 138 61.6
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 5.0e-37 159.1 132 56.8
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 8.5e-37 158.3 121 66.9
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 1.8e-31 140.6 150 54.0
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 5.9e-30 135.6 118 60.2
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 8.6e-29 131.7 209 42.1
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 5.5e-28 129.0 133 57.9
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 3.7e-24 116.3 257 33.5
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 8.6e-21 105.1 80 66.2
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 8.9e-18 95.1 80 62.5
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 5.0e-13 79.3 108 45.4
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 7.5e-09 65.5 49 59.2


User provided reference genes

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