Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62035272 Chenopodium quinoa HOM05D007389 ORTHO05D009400 9.9e-206 719.9 373 100.0
EL10Ac6g14465 Beta vulgaris HOM05D007389 ORTHO05D009400 2.8e-144 515.8 472 61.0
AUR62002912 Chenopodium quinoa HOM05D007389 ORTHO05D009400 4.8e-136 488.4 373 72.4
Hund25095 Selenicereus undatus HOM05D007389 ORTHO05D009400 1.2e-123 447.2 380 63.4
Sc11g0003170 Simmondsia chinensis HOM05D007389 ORTHO05D009400 1.3e-112 410.6 376 58.2
GSVIVG01011940001 Vitis vinifera HOM05D007389 ORTHO05D009400 2.1e-107 393.3 377 55.2
Actinidia16624 Actinidia chinensis HOM05D007389 ORTHO05D009400 2.8e-107 392.9 377 54.9
Gorai.008G185300 Gossypium raimondii HOM05D007389 ORTHO05D009400 5.2e-106 388.7 377 55.4
Gohir.A12G169500 Gossypium hirsutum HOM05D007389 ORTHO05D009400 6.8e-106 388.3 377 55.4
Gohir.D12G172800 Gossypium hirsutum HOM05D007389 ORTHO05D009400 6.8e-106 388.3 377 55.4
Hma1.2p1_0406F.1_g146090 Hydrangea macrophylla HOM05D007389 ORTHO05D009400 6.8e-106 388.3 377 55.7
COL.COLO4_07880 Corchorus olitorius HOM05D007389 ORTHO05D009400 2.2e-104 383.3 367 55.0
Manes.06G071400 Manihot esculenta HOM05D007389 ORTHO05D009400 6.4e-104 381.7 381 53.5
Sabra10G0097900 Salix brachista HOM05D007389 ORTHO05D009400 5.4e-103 378.6 378 52.6
Rhsim09G0111300 Rhododendron simsii HOM05D007389 ORTHO05D009400 2.0e-102 376.7 376 53.7
Potri.010G128700 Populus trichocarpa HOM05D007389 ORTHO05D009400 2.7e-102 376.3 378 53.2
Ciclev10031830m.g Citrus clementina HOM05D007389 ORTHO05D009400 6.0e-102 375.2 378 52.9
TWI31G0236 Tripterygium wilfordii HOM05D007389 ORTHO05D009400 2.3e-101 373.2 377 54.6
Thecc.02G359800 Theobroma cacao HOM05D007389 ORTHO05D009400 3.9e-101 372.5 377 53.3
CSS0047863 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 5.0e-101 372.1 362 55.0
Prupe.1G306500 Prunus persica HOM05D007389 ORTHO05D009400 8.6e-101 371.3 378 51.9
FvH4_4g27970 Fragaria vesca HOM05D007389 ORTHO05D009400 1.9e-100 370.2 377 52.0
FAN17G2097 Fragaria x ananassa HOM05D007389 ORTHO05D009400 2.5e-100 369.8 383 50.7
RcHm_v2.0_Chr4g0435681 Rosa chinensis HOM05D007389 ORTHO05D009400 7.3e-100 368.2 379 52.0
Cfa018619 Carpinus fangiana HOM05D007389 ORTHO05D009400 9.5e-100 367.9 377 52.3
vmacro10536 Vaccinium macrocarpon HOM05D007389 ORTHO05D009400 9.5e-100 367.9 363 54.3
CSS0013871 Camellia sinensis var. sinensis HOM05D007389 ORTHO05D009400 1.8e-98 363.6 357 55.5
SEGI_35624 Sequoiadendron giganteum HOM05D007389 ORTHO05D009400 5.2e-98 362.1 377 49.9
PGR102G2947 Punica granatum HOM05D007389 ORTHO05D009400 8.3e-96 354.8 378 51.3
Cc11_g10500 Coffea canephora HOM05D007389 ORTHO05D009400 1.1e-95 354.4 377 50.7
ClCG05G022970 Citrullus lanatus HOM05D007389 ORTHO05D009400 1.9e-95 353.6 377 50.7
Nn4g23752 Nelumbo nucifera HOM05D007389 ORTHO05D009400 3.2e-95 352.8 363 51.8
TAR371G0503 Trochodendron aralioides HOM05D007389 ORTHO05D009400 4.1e-95 352.4 353 54.1
Eucgr.B03042 Eucalyptus grandis HOM05D007389 ORTHO05D009400 7.1e-95 351.7 378 50.3
CiPaw.15G004300 Carya illinoinensis HOM05D007389 ORTHO05D009400 2.1e-94 350.1 360 52.2
MD13G1045500 Malus domestica HOM05D007389 ORTHO05D009400 2.1e-94 350.1 377 48.5
CsaV3_5G034040 Cucumis sativus L. HOM05D007389 ORTHO05D009400 6.0e-94 348.6 377 49.9
Sed0014526 Sechium edule HOM05D007389 ORTHO05D009400 1.0e-93 347.8 376 48.9
ATR0681G192 Amborella trichopoda HOM05D007389 ORTHO05D009400 1.3e-93 347.4 362 48.9
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 3.9e-93 345.9 353 53.3
Nitab4.5_0014175g0010 Nicotiana tabacum HOM05D007389 ORTHO05D009400 5.1e-93 345.5 377 49.6
Glyma.02G098600 Glycine max HOM05D007389 ORTHO05D009400 1.9e-92 343.6 379 49.3
Lj2g0025946 Lotus japonicus HOM05D007389 ORTHO05D009400 3.3e-92 342.8 384 51.6
Lalb_Chr10g0099831 Lupinus albus HOM05D007389 ORTHO05D009400 4.3e-92 342.4 379 49.6
Phvul.003G028200 Phaseolus vulgaris HOM05D007389 ORTHO05D009400 8.1e-91 338.2 379 48.5
SalBow8G0691 Salvia bowleyana HOM05D007389 ORTHO05D009400 1.1e-90 337.8 379 48.8
PGSC0003DMG400007468 Solanum tuberosum HOM05D007389 ORTHO05D009400 1.4e-90 337.4 377 49.1
Sopen04g002110 Solanum pennellii HOM05D007389 ORTHO05D009400 2.4e-90 336.7 377 48.8
ECA234G1470 Erigeron canadensis HOM05D007389 ORTHO05D009400 1.7e-88 330.5 375 48.8
Peaxi162Scf00086g00615 Petunia axillaris HOM05D007389 ORTHO05D009400 6.4e-88 328.6 377 49.1
HanXRQChr16g0529211 Helianthus annuus HOM05D007389 ORTHO05D009400 1.1e-87 327.8 375 48.3
Nitab4.5_0000280g0020 Nicotiana tabacum HOM05D007389 ORTHO05D009400 3.5e-86 322.8 377 47.2
Nn3g17765 Nelumbo nucifera HOM05D007389 ORTHO05D009400 7.8e-86 321.6 376 46.5
FAN22G0259 Fragaria x ananassa HOM05D007389 ORTHO05D009400 5.1e-85 318.9 344 51.2
Pp3c18_11800 Physcomitrium patens HOM05D007389 ORTHO05D009400 5.1e-85 318.9 377 45.9
THA.LOC104825707 Tarenaya hassleriana HOM05D007389 ORTHO05D009400 6.6e-85 318.5 368 47.3
AagrBONN_evm.TU.Sc2ySwM_228.4489 Anthoceros agrestis HOM05D007389 ORTHO05D009400 8.7e-85 318.2 378 43.1
MELO3C012220.2 Cucumis melo HOM05D007389 ORTHO05D009400 4.3e-84 315.8 367 49.0
VMungo1215G1613 Vigna mungo HOM05D007389 ORTHO05D009400 2.4e-82 310.1 362 48.9
SGA_v2.0_scaffold124G33583 Striga asiatica HOM05D007389 ORTHO05D009400 3.4e-81 306.2 377 44.6
Duzib268G0586 Durio zibethinus HOM05D007389 ORTHO05D009400 5.8e-81 305.4 317 52.7
Lsat_1_v5_gn_4_20121 Lactuca sativa HOM05D007389 ORTHO05D009400 2.4e-79 300.1 378 45.5
Migut.E00312 Erythranthe guttata HOM05D007389 ORTHO05D009400 7.1e-79 298.5 376 45.2
Mapoly0108s0021 Marchantia polymorpha HOM05D007389 ORTHO05D009400 7.1e-79 298.5 381 41.5
CDE08G0863 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 1.2e-78 297.7 379 43.5
CDE02G3618 Ceratophyllum demersum HOM05D007389 ORTHO05D009400 1.6e-78 297.4 379 43.8
Lj3A1018T64 Lonicera japonica HOM05D007389 ORTHO05D009400 4.6e-78 295.8 361 46.8
Oeu042041.1 Olea europaea HOM05D007389 ORTHO05D009400 2.5e-76 290.0 301 51.8
PSO063G2802 Papaver somniferum HOM05D007389 ORTHO05D009400 3.3e-76 289.7 380 45.5
Sp1g11820 Schrenkiella parvula HOM05D007389 ORTHO05D009400 1.6e-75 287.3 377 45.1
SMO361G0332 Selaginella moellendorffii HOM05D007389 ORTHO05D009400 5.3e-74 282.3 363 41.9
Pp3c15_5000 Physcomitrium patens HOM05D007389 ORTHO05D009400 6.9e-74 282.0 404 39.4
Thhalv10009351m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 2.0e-73 280.4 366 44.3
AT1G13310 Arabidopsis thaliana HOM05D007389 ORTHO05D009400 2.9e-72 276.6 369 42.5
unitig_27.g25245 Utricularia gibba HOM05D007389 ORTHO05D009400 2.9e-72 276.6 363 43.8
BraA08t35158Z Brassica rapa HOM05D007389 ORTHO05D009400 3.8e-72 276.2 367 42.8
Dinv21123 Davidia involucrata HOM05D007389 ORTHO05D009400 1.9e-71 273.9 262 56.9
A08p32350 Brassica napus HOM05D007389 ORTHO05D009400 7.1e-71 271.9 367 42.5
C08p16080 Brassica napus HOM05D007389 ORTHO05D009400 7.1e-71 271.9 367 42.8
BolC8t49230H Brassica oleracea HOM05D007389 ORTHO05D009400 1.6e-70 270.8 366 43.2
CARHR013690 Cardamine hirsuta HOM05D007389 ORTHO05D009400 2.7e-70 270.0 369 42.0
Carub.0001s1304 Capsella rubella HOM05D007389 ORTHO05D009400 7.9e-70 268.5 366 42.1
QL01p044805 Quercus lobata HOM05D007389 ORTHO05D009400 1.0e-69 268.1 264 54.9
AL1G25070 Arabidopsis lyrata HOM05D007389 ORTHO05D009400 1.8e-69 267.3 370 42.2
Cpa.g.sc1.212 Carica papaya HOM05D007389 ORTHO05D009400 6.7e-69 265.4 261 54.4
Aa31LG1G1460 Aethionema arabicum HOM05D007389 ORTHO05D009400 5.6e-68 262.3 368 42.1
HPP92_023813 Vanilla planifolia HOM05D007389 ORTHO05D009400 4.5e-65 252.7 376 37.8
AagrBONN_evm.TU.Sc2ySwM_362.2055 Anthoceros agrestis HOM05D007389 ORTHO05D009400 1.1e-60 238.0 255 47.8
HanXRQChr17g0567921 Helianthus annuus HOM05D007389 ORTHO05D009400 3.7e-59 233.0 253 47.8
Actinidia14859 Actinidia chinensis HOM05D007389 ORTHO05D009400 2.5e-55 220.3 228 53.1
Thhalv10023040m.g Eutrema salsugineum HOM05D007389 ORTHO05D009400 1.8e-53 214.2 380 36.3
BcaC06g31117 Brassica carinata HOM05D007389 ORTHO05D009400 1.9e-44 184.1 368 34.8
CBR_g39725 Chara braunii HOM05D001740 ORTHO05D001468 5.3e-42 176.0 263 38.4
A06p42500 Brassica napus HOM05D001825 ORTHO05D002336 2.5e-39 167.2 368 32.6
BraA06t27163Z Brassica rapa HOM05D001825 ORTHO05D002336 2.7e-38 163.7 366 32.2
FAN12G3113 Fragaria x ananassa HOM05D007389 ORTHO05D009400 1.8e-29 134.4 133 54.1
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 3.3e-28 130.2 197 38.6
BcaC06g33956 Brassica carinata HOM05D007389 ORTHO05D009400 3.7e-27 126.7 381 28.9
QL01p044810 Quercus lobata HOM05D007389 ORTHO05D009400 6.3e-27 125.9 114 50.0
Duzib251G0237 Durio zibethinus HOM05D007389 ORTHO05D009400 1.1e-26 125.2 143 49.0
PSO782G3111 Papaver somniferum HOM05D007389 ORTHO05D009400 9.1e-26 122.1 166 41.6
BolC7t44001H Brassica oleracea HOM05D001825 ORTHO05D002336 1.3e-24 118.2 312 31.4
C07p34700 Brassica napus HOM05D001825 ORTHO05D002336 7.2e-23 112.5 308 30.8
Lalb_Chr04g0254881 Lupinus albus HOM05D007389 ORTHO05D009400 3.0e-21 107.1 121 43.0
MCO11G211 Micromonas commoda HOM05D007389 ORTHO05D009400 3.0e-21 107.1 429 24.5
Nitab4.5_0000280g0130 Nicotiana tabacum HOM05D007389 ORTHO05D009400 6.3e-19 99.4 144 43.8
TAR629G0747 Trochodendron aralioides HOM05D007389 ORTHO05D009400 2.0e-17 94.4 151 41.7
TAR573G0003 Trochodendron aralioides HOM05D007389 ORTHO05D009400 3.8e-16 90.1 114 46.5
SalBow8G3870 Salvia bowleyana HOM05D007389 ORTHO05D009400 6.8e-13 79.3 99 47.5
Cfa022433 Carpinus fangiana HOM05D003851 ORTHO05D016913 1.3e-08 65.1 258 26.4
Cre09.g393580 Chlamydomonas reinhardtii HOM05D007389 ORTHO05D143270 2.9e-08 63.9 215 26.5


User provided reference genes

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