Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 6.3e-282 973.4 472 100.0
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 3.0e-244 848.2 439 92.7
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 5.4e-201 704.5 420 79.3
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 1.2e-176 623.6 430 72.3
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 2.1e-168 596.3 396 68.4
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 2.1e-168 596.3 421 64.4
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 3.3e-166 589.0 396 68.4
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 1.7e-165 586.6 426 63.6
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 2.2e-165 586.3 404 67.1
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 6.3e-165 584.7 396 67.4
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 1.8e-164 583.2 406 66.5
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 4.1e-164 582.0 405 65.9
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 5.3e-164 581.6 404 66.6
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 5.3e-164 581.6 396 66.7
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 1.2e-163 580.5 417 65.2
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 1.2e-163 580.5 396 67.2
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 1.5e-163 580.1 396 68.4
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 2.6e-163 579.3 396 66.4
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 5.9e-163 578.2 419 64.2
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 2.9e-162 575.9 429 63.4
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 1.4e-161 573.5 396 66.2
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 1.4e-161 573.5 396 67.2
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 1.9e-161 573.2 396 66.9
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 3.2e-161 572.4 427 62.8
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 3.2e-161 572.4 392 67.1
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 2.7e-160 569.3 409 65.3
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 4.7e-160 568.5 396 65.2
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.0e-159 567.4 407 63.4
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 1.0e-159 567.4 437 61.8
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 2.3e-159 566.2 407 64.6
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 3.0e-159 565.8 416 63.5
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 3.0e-159 565.8 429 61.8
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 3.9e-159 565.5 398 65.1
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 3.9e-159 565.5 409 65.3
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 5.1e-159 565.1 420 63.8
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 6.7e-159 564.7 412 63.1
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 6.7e-159 564.7 423 62.4
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 8.8e-159 564.3 396 65.9
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.5e-158 563.5 407 63.4
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 1.5e-158 563.5 425 62.1
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 1.5e-158 563.5 395 65.8
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 2.0e-158 563.1 427 60.4
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 7.4e-158 561.2 429 61.3
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 9.7e-158 560.8 398 65.6
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 1.7e-157 560.1 401 62.8
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 1.7e-157 560.1 392 64.3
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 2.2e-157 559.7 392 64.3
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 2.8e-157 559.3 410 64.1
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 3.7e-157 558.9 397 64.5
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 3.7e-157 558.9 407 62.9
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 4.8e-157 558.5 433 61.4
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.4e-156 557.0 401 62.3
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.4e-156 557.0 407 62.9
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 2.4e-156 556.2 411 61.1
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 4.1e-156 555.4 402 64.4
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 1.2e-155 553.9 408 62.3
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 2.0e-155 553.1 387 65.9
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 1.0e-154 550.8 396 64.9
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 8.5e-154 547.7 411 63.0
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 1.1e-153 547.4 395 62.0
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 1.1e-153 547.4 417 61.2
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 1.1e-153 547.4 416 61.1
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 1.4e-153 547.0 416 61.1
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 1.9e-153 546.6 445 59.1
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 1.2e-152 543.9 416 60.6
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 1.2e-152 543.9 399 61.2
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 1.5e-150 537.0 436 56.9
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 2.2e-146 523.1 406 59.6
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 8.0e-144 514.6 422 59.7
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 2.6e-142 509.6 426 58.2
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 5.7e-142 508.4 404 60.1
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 5.7e-142 508.4 398 61.3
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 2.4e-140 503.1 431 55.5
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 4.5e-139 498.8 407 57.7
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 1.7e-138 496.9 397 57.9
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 1.9e-137 493.4 396 60.6
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 1.4e-135 487.3 396 57.8
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 1.2e-134 484.2 393 56.7
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 3.4e-134 482.6 409 58.9
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 2.2e-133 479.9 398 59.0
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 1.0e-130 471.1 331 65.0
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 1.1e-129 467.6 313 66.1
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 4.7e-128 462.2 414 52.9
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 1.7e-125 453.8 328 66.5
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 4.5e-123 445.7 316 66.8
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 1.9e-121 440.3 324 64.2
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 1.2e-120 437.6 304 67.4
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.2e-118 431.0 425 52.9
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 2.2e-117 426.8 411 50.9
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 3.7e-117 426.0 388 54.9
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 1.2e-115 421.0 307 61.6
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 2.7e-115 419.9 383 54.8
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 7.8e-115 418.3 304 62.5
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 3.6e-96 356.3 225 69.8
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 1.1e-87 328.2 225 66.7
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 2.3e-74 283.9 237 57.4
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 1.1e-65 255.0 198 58.1
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 1.5e-62 244.6 248 52.8
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 1.9e-60 237.7 379 35.6
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.7e-49 198.7 130 70.0
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 9.7e-49 198.7 130 70.0
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 1.3e-48 198.4 164 55.5
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 9.4e-44 182.2 387 31.0
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 1.1e-36 158.7 155 49.7
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 1.3e-32 145.2 180 45.6
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 5.5e-28 129.8 171 43.9
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 5.5e-28 129.8 171 43.9
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 1.3e-24 118.6 70 77.1
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 3.5e-22 110.5 134 42.5
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 7.7e-22 109.4 63 74.6
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 2.1e-19 101.3 75 61.3
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 2.9e-13 80.9 517 21.5
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 8.0e-11 72.8 203 28.6
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 3.0e-10 70.9 75 46.7
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 7.5e-09 66.2 372 21.8
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 1.3e-08 65.5 75 44.0
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 9.2e-07 59.3 77 36.4


User provided reference genes

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