Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62035138 Chenopodium quinoa HOM05D006240 ORTHO05D007709 1.3e-112 409.8 216 100.0
AUR62042908 Chenopodium quinoa HOM05D006240 ORTHO05D007709 8.2e-104 380.6 218 93.6
EL10Ac4g09545 Beta vulgaris HOM05D006240 ORTHO05D007709 4.9e-72 275.0 215 73.0
Ah.00g001020 Amaranthus hybridus HOM05D006240 ORTHO05D007709 1.2e-65 253.8 222 64.9
Dinv31964 Davidia involucrata HOM05D006240 ORTHO05D007709 2.1e-43 179.9 223 50.7
TAR628G0625 Trochodendron aralioides HOM05D006240 ORTHO05D007709 1.4e-42 177.2 210 51.9
GSVIVG01013393001 Vitis vinifera HOM05D006240 ORTHO05D007709 3.1e-42 176.0 219 49.3
MBI05_g33294_MAGBIO Magnolia biondii HOM05D006240 ORTHO05D007709 8.9e-42 174.5 218 49.1
CiPaw.08G075400 Carya illinoinensis HOM05D006240 ORTHO05D007709 2.6e-41 172.9 199 52.8
TAR376G0245 Trochodendron aralioides HOM05D006240 ORTHO05D007709 5.8e-41 171.8 206 50.0
Potri.005G253101 Populus trichocarpa HOM05D006240 ORTHO05D007709 1.7e-40 170.2 195 52.3
Duzib041G0618 Durio zibethinus HOM05D006240 ORTHO05D007709 2.9e-40 169.5 211 51.2
Actinidia15507 Actinidia chinensis HOM05D006240 ORTHO05D007709 6.4e-40 168.3 185 52.4
QL02p015120 Quercus lobata HOM05D006240 ORTHO05D007709 6.4e-40 168.3 202 50.5
Sabra05G0196300 Salix brachista HOM05D006240 ORTHO05D007709 8.4e-40 167.9 195 50.8
CSS0005151 Camellia sinensis var. sinensis HOM05D006240 ORTHO05D007709 1.4e-39 167.2 197 49.7
SGA_v2.0_scaffold54G19646 Striga asiatica HOM05D006240 ORTHO05D007709 1.4e-39 167.2 190 54.2
TWI36G0187 Tripterygium wilfordii HOM05D006240 ORTHO05D007709 1.9e-39 166.8 192 50.0
Actinidia17059 Actinidia chinensis HOM05D006240 ORTHO05D007709 2.4e-39 166.4 190 48.9
Hma1.2p1_0612F.1_g188890 Hydrangea macrophylla HOM05D006240 ORTHO05D007709 3.2e-39 166.0 206 49.5
vmacro21788 Vaccinium macrocarpon HOM05D006240 ORTHO05D007709 3.2e-39 166.0 213 48.8
Nitab4.5_0000564g0070 Nicotiana tabacum HOM05D006240 ORTHO05D007709 5.4e-39 165.2 196 50.0
Nitab4.5_0006318g0100 Nicotiana tabacum HOM05D006240 ORTHO05D007709 5.4e-39 165.2 192 51.0
MSTRG.24503 Avicennia marina HOM05D006240 ORTHO05D007709 1.2e-38 164.1 188 51.6
Ciclev10002499m.g Citrus clementina HOM05D006240 ORTHO05D007709 1.2e-38 164.1 196 51.5
Aqoxy5G00997 Aquilegia oxysepala HOM05D006240 ORTHO05D007709 2.1e-38 163.3 200 51.5
Thecc.08G062400 Theobroma cacao HOM05D006240 ORTHO05D007709 2.7e-38 162.9 196 51.5
Rhsim06G0005200 Rhododendron simsii HOM05D006240 ORTHO05D007709 3.5e-38 162.5 200 50.5
Gorai.002G114700 Gossypium raimondii HOM05D006240 ORTHO05D007709 4.6e-38 162.2 211 46.9
Nn5g31000 Nelumbo nucifera HOM05D006240 ORTHO05D007709 4.6e-38 162.2 205 51.2
Thhalv10008759m.g Eutrema salsugineum HOM05D006240 ORTHO05D007709 6.0e-38 161.8 189 49.7
Hund05091 Selenicereus undatus HOM05D006240 ORTHO05D007709 7.8e-38 161.4 232 49.6
BcaB03g14301 Brassica carinata HOM05D006240 ORTHO05D007709 1.3e-37 160.6 195 49.7
COL.COLO4_07215 Corchorus olitorius HOM05D006240 ORTHO05D007709 1.7e-37 160.2 186 53.2
Migut.M00585 Erythranthe guttata HOM05D006240 ORTHO05D007709 1.7e-37 160.2 184 50.0
Peaxi162Scf00129g00239 Petunia axillaris HOM05D006240 ORTHO05D007709 1.7e-37 160.2 200 48.0
Sc15g0004230 Simmondsia chinensis HOM05D006240 ORTHO05D007709 2.3e-37 159.8 165 55.2
Sopen02g032680 Solanum pennellii HOM05D006240 ORTHO05D007709 2.3e-37 159.8 197 48.2
THA.LOC104811476 Tarenaya hassleriana HOM05D006240 ORTHO05D007709 2.3e-37 159.8 200 47.0
BcaB03g12855 Brassica carinata HOM05D006240 ORTHO05D007709 3.0e-37 159.5 196 50.5
Psat5g009800 Pisum sativum HOM05D006240 ORTHO05D007709 3.0e-37 159.5 192 51.6
CANSAT56G3734 Cannabis sativa HOM05D006240 ORTHO05D007709 6.6e-37 158.3 198 48.0
PGSC0003DMG400001324 Solanum tuberosum HOM05D006240 ORTHO05D007709 6.6e-37 158.3 201 48.8
Carub.0001s2022 Capsella rubella HOM05D006240 ORTHO05D007709 8.7e-37 157.9 201 48.8
DCAR_020858 Daucus carota HOM05D001217 ORTHO05D007709 8.7e-37 157.9 224 46.0
Gohir.D01G089000 Gossypium hirsutum HOM05D006240 ORTHO05D007709 1.1e-36 157.5 211 46.0
AL1G33760 Arabidopsis lyrata HOM05D006240 ORTHO05D007709 1.5e-36 157.1 194 50.0
BcaC07g39051 Brassica carinata HOM05D006240 ORTHO05D007709 1.9e-36 156.8 191 50.8
Manes.13G069200 Manihot esculenta HOM05D006240 ORTHO05D007709 1.9e-36 156.8 197 50.3
RcHm_v2.0_Chr1g0349471 Rosa chinensis HOM05D006240 ORTHO05D007709 1.9e-36 156.8 191 49.7
Sp1g18470 Schrenkiella parvula HOM05D006240 ORTHO05D007709 1.9e-36 156.8 195 50.3
Medtr3g115650 Medicago truncatula HOM05D006240 ORTHO05D007709 3.3e-36 156.0 210 49.0
RcHm_v2.0_Chr7g0215611 Rosa chinensis HOM05D006240 ORTHO05D007709 3.3e-36 156.0 191 49.7
SalBow6G2548 Salvia bowleyana HOM05D006240 ORTHO05D007709 5.6e-36 155.2 191 49.2
CsaV3_4G037430 Cucumis sativus L. HOM05D006240 ORTHO05D007709 1.3e-35 154.1 201 48.8
AT1G20770 Arabidopsis thaliana HOM05D006240 ORTHO05D007709 1.6e-35 153.7 194 48.5
Lj1g0026125 Lotus japonicus HOM05D006240 ORTHO05D007709 1.6e-35 153.7 190 50.0
unitig_578.g16237 Utricularia gibba HOM05D006240 ORTHO05D007709 1.6e-35 153.7 187 48.7
FAN01G0923 Fragaria x ananassa HOM05D006240 ORTHO05D007709 2.1e-35 153.3 191 49.2
FvH4_7g11300 Fragaria vesca HOM05D006240 ORTHO05D007709 2.8e-35 152.9 191 49.2
FAN03G2060 Fragaria x ananassa HOM05D006240 ORTHO05D007709 2.8e-35 152.9 191 49.2
C08p20350 Brassica napus HOM05D006240 ORTHO05D007709 3.6e-35 152.5 190 48.4
Migut.N02969 Erythranthe guttata HOM05D006240 ORTHO05D007709 4.8e-35 152.1 183 48.1
FAN06G3720 Fragaria x ananassa HOM05D006240 ORTHO05D007709 6.2e-35 151.8 191 48.7
Lsat_1_v5_gn_2_1920 Lactuca sativa HOM05D006240 ORTHO05D007709 6.2e-35 151.8 200 48.5
FAN10G2738 Fragaria x ananassa HOM05D006240 ORTHO05D007709 8.1e-35 151.4 191 49.2
Lalb_Chr11g0061501 Lupinus albus HOM05D006240 ORTHO05D007709 1.1e-34 151.0 199 46.7
VMungo1383G1920 Vigna mungo HOM05D006240 ORTHO05D007709 1.1e-34 151.0 177 51.4
BcaC06g34834 Brassica carinata HOM05D006240 ORTHO05D007709 1.4e-34 150.6 197 47.2
C07p22820 Brassica napus HOM05D006240 ORTHO05D007709 1.4e-34 150.6 197 47.2
BolC7t42820H Brassica oleracea HOM05D006240 ORTHO05D007709 1.4e-34 150.6 199 46.7
Cc04_g09300 Coffea canephora HOM05D006240 ORTHO05D007709 1.4e-34 150.6 204 44.1
BolC8t49663H Brassica oleracea HOM05D006240 ORTHO05D007709 1.8e-34 150.2 196 46.9
MELO3C017040.2 Cucumis melo HOM05D006240 ORTHO05D007709 1.8e-34 150.2 200 47.5
Glyma.19G151500 Glycine max HOM05D006240 ORTHO05D007709 2.4e-34 149.8 179 51.4
Migut.M00223 Erythranthe guttata HOM05D006240 ORTHO05D007709 3.1e-34 149.4 184 47.8
Glyma.03G148200 Glycine max HOM05D006240 ORTHO05D007709 3.1e-34 149.4 196 46.9
HanXRQChr16g0516421 Helianthus annuus HOM05D006240 ORTHO05D007709 3.1e-34 149.4 213 46.5
Lj4C7G6 Lonicera japonica HOM05D006240 ORTHO05D007709 3.1e-34 149.4 212 46.7
TPR.G38126 Trifolium pratense HOM05D006240 ORTHO05D007709 3.1e-34 149.4 200 45.0
PSO210G3458 Papaver somniferum HOM05D006240 ORTHO05D007709 4.0e-34 149.1 201 47.3
Nn4g24539 Nelumbo nucifera HOM05D006240 ORTHO05D007709 5.3e-34 148.7 195 49.7
Phvul.001G146200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 5.3e-34 148.7 187 48.1
A07p15490 Brassica napus HOM05D006240 ORTHO05D007709 6.9e-34 148.3 196 49.0
Ca_15403_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 6.9e-34 148.3 200 47.0
Ca_29886_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 6.9e-34 148.3 200 47.0
CARHR021210 Cardamine hirsuta HOM05D006240 ORTHO05D007709 9.0e-34 147.9 193 45.1
PGR031G1135 Punica granatum HOM05D006240 ORTHO05D007709 1.2e-33 147.5 195 48.7
MD07G1117600 Malus domestica HOM05D006240 ORTHO05D007709 2.0e-33 146.7 190 48.9
Sed0018366 Sechium edule HOM05D006240 ORTHO05D007709 2.0e-33 146.7 195 48.2
Aa31LG7G4930 Aethionema arabicum HOM05D006240 ORTHO05D007709 2.6e-33 146.4 208 44.2
BraA07t29290Z Brassica rapa HOM05D006240 ORTHO05D007709 3.4e-33 146.0 195 48.7
BraA08t34862Z Brassica rapa HOM05D006240 ORTHO05D007709 4.5e-33 145.6 201 48.3
ECA232G5059 Erigeron canadensis HOM05D006240 ORTHO05D007709 5.8e-33 145.2 208 43.8
A08p29270 Brassica napus HOM05D006240 ORTHO05D007709 7.6e-33 144.8 201 47.8
CAN.G206.149 Capsicum annuum HOM05D006240 ORTHO05D007709 1.3e-32 144.1 202 43.1
CDE04G0018 Ceratophyllum demersum HOM05D006240 ORTHO05D007709 1.7e-32 143.7 206 45.1
Os04g0509200 Oryza sativa ssp. japonica HOM05D006240 ORTHO05D007709 6.4e-32 141.7 191 46.6
Haze_22830 Corylus avellana HOM05D006240 ORTHO05D007709 2.4e-31 139.8 175 51.4
Atru.chr9.2231 Acer truncatum HOM05D006240 ORTHO05D007709 7.1e-31 138.3 189 44.4
MD02G1098700 Malus domestica HOM05D006240 ORTHO05D007709 7.1e-31 138.3 192 45.8
PSO170G2591 Papaver somniferum HOM05D006240 ORTHO05D007709 9.3e-31 137.9 189 48.1
Prupe.2G140800 Prunus persica HOM05D006240 ORTHO05D007709 2.1e-30 136.7 192 47.4
ClCG11G018840 Citrullus lanatus HOM05D006240 ORTHO05D007709 2.7e-30 136.3 266 38.0
Eucgr.K03289 Eucalyptus grandis HOM05D006240 ORTHO05D007709 4.3e-28 129.0 237 40.1
Cfa014112 Carpinus fangiana HOM05D006240 ORTHO05D007709 7.4e-28 128.3 168 49.4
HPP92_012646 Vanilla planifolia HOM05D006240 ORTHO05D007709 1.6e-27 127.1 192 43.2
Gohir.A01G103700 Gossypium hirsutum HOM05D006240 ORTHO05D007709 6.2e-27 125.2 179 44.7
arahy.Tifrunner.gnm1.ann1.MR2FC0 Arachis hypogaea HOM05D006240 ORTHO05D007709 5.8e-25 118.6 196 42.9
Zm00001eb077760 Zea mays HOM05D006240 ORTHO05D007709 3.3e-20 102.8 155 43.2
Solyc02g087940.4 Solanum lycopersicum HOM05D006240 ORTHO05D007709 2.1e-19 100.1 120 47.5
Phvul.009G075200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 6.9e-18 95.1 125 48.0
SGA_v2.0_scaffold54G19644 Striga asiatica HOM05D006240 ORTHO05D007709 3.4e-17 92.8 306 31.7
arahy.Tifrunner.gnm1.ann1.W2HKS7 Arachis hypogaea HOM05D006240 ORTHO05D007709 2.9e-16 89.7 169 38.5
FAN10G3076 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.1e-15 87.8 87 52.9
ATR0807G014 Amborella trichopoda HOM05D006240 ORTHO05D007709 4.6e-14 82.4 108 44.4
Pp3c17_23460 Physcomitrium patens HOM05D006240 ORTHO05D007709 3.0e-13 79.7 210 33.3
Atru.chr3.2559 Acer truncatum HOM05D006240 ORTHO05D007709 4.8e-11 72.4 122 41.0
Atru.chr9.2243 Acer truncatum HOM05D006240 ORTHO05D007709 8.2e-11 71.6 74 51.4
SEGI_19917 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 1.7e-08 63.9 131 32.8
Mapoly0189s0009 Marchantia polymorpha HOM05D006240 ORTHO05D007709 3.8e-08 62.8 217 25.3
SGA_v2.0_scaffold54G19641 Striga asiatica HOM05D005561 ORTHO05D006834 6.5e-08 62.0 86 50.0
CBR_g41721 Chara braunii HOM05D006240 ORTHO05D007709 1.4e-07 60.8 203 29.1
SEGI_13318 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 3.2e-07 59.7 57 52.6
Atru.chr9.2228 Acer truncatum HOM05D000343 ORTHO05D000975 4.6e-06 55.8 44 59.1


User provided reference genes

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