Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 6.3e-145 517.3 240 100.0
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 1.1e-117 426.8 240 84.6
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 1.9e-93 346.3 242 68.2
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 2.0e-90 336.3 240 67.1
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 7.0e-88 327.8 241 65.6
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 2.0e-87 326.2 240 64.2
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 1.3e-86 323.6 240 63.8
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 3.9e-86 322.0 241 63.5
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 8.6e-86 320.9 242 62.8
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 1.2e-84 317.0 241 63.5
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 1.6e-84 316.6 245 62.9
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 1.6e-84 316.6 235 63.4
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 2.8e-84 315.8 241 63.1
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 2.8e-84 315.8 246 62.6
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 2.8e-84 315.8 238 63.0
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 4.7e-84 315.1 237 63.7
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 1.8e-83 313.2 236 63.6
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 2.3e-83 312.8 235 65.5
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 5.2e-83 311.6 240 59.6
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 6.8e-83 311.2 236 61.0
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 6.8e-83 311.2 245 61.2
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 6.8e-83 311.2 241 61.4
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 6.8e-83 311.2 243 60.9
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 2.0e-82 309.7 182 76.9
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 2.0e-82 309.7 231 61.5
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 2.6e-82 309.3 238 61.8
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 4.4e-82 308.5 239 62.3
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 4.4e-82 308.5 236 60.6
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 4.4e-82 308.5 236 60.6
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 4.4e-82 308.5 238 60.5
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 4.4e-82 308.5 242 59.9
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 5.8e-82 308.1 240 62.1
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 7.5e-82 307.8 240 61.7
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 9.8e-82 307.4 245 60.4
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 1.7e-81 306.6 236 62.7
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 2.2e-81 306.2 245 61.6
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 1.1e-80 303.9 237 59.9
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 1.9e-80 303.1 234 61.1
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 1.9e-80 303.1 247 59.5
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 2.4e-80 302.8 245 60.4
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 2.4e-80 302.8 247 59.9
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 3.2e-80 302.4 245 59.6
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 3.2e-80 302.4 243 62.1
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 5.4e-80 301.6 247 60.7
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 9.2e-80 300.8 236 59.3
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 9.2e-80 300.8 241 61.0
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 9.2e-80 300.8 269 56.9
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 1.2e-79 300.4 245 60.4
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 1.2e-79 300.4 242 61.2
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 1.6e-79 300.1 234 62.0
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 1.6e-79 300.1 244 59.4
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 2.7e-79 299.3 243 57.2
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 2.7e-79 299.3 233 61.8
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 2.7e-79 299.3 245 59.2
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 1.0e-78 297.4 234 62.0
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 2.3e-78 296.2 234 61.5
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 8.6e-78 294.3 234 61.1
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 8.6e-78 294.3 234 61.5
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 8.6e-78 294.3 234 61.5
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 1.9e-77 293.1 246 56.9
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 1.9e-77 293.1 243 58.4
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 1.9e-77 293.1 244 58.2
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 2.5e-77 292.7 244 57.8
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 7.3e-77 291.2 237 59.5
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 7.3e-77 291.2 188 68.6
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 1.6e-76 290.0 235 60.0
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 2.8e-76 289.3 267 55.4
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 3.6e-76 288.9 235 59.6
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 1.1e-75 287.3 293 50.9
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 1.8e-75 286.6 248 57.3
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 3.1e-75 285.8 231 59.3
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 4.0e-75 285.4 242 59.1
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 2.0e-74 283.1 241 56.4
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 2.6e-74 282.7 191 67.0
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 4.4e-74 282.0 235 57.0
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 4.4e-74 282.0 191 66.5
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 5.8e-74 281.6 243 55.6
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 7.5e-74 281.2 242 58.3
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 1.3e-73 280.4 190 67.9
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 3.7e-73 278.9 188 66.5
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 1.1e-72 277.3 186 66.1
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 3.2e-72 275.8 188 65.4
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 7.1e-72 274.6 257 51.8
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 2.3e-70 269.6 189 66.1
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 3.0e-70 269.2 243 54.7
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 6.6e-70 268.1 189 65.1
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 1.1e-69 267.3 238 55.0
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 2.5e-69 266.2 183 67.2
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 3.3e-69 265.8 192 65.1
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 5.6e-69 265.0 230 56.1
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 1.2e-68 263.8 189 66.1
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 2.8e-68 262.7 193 60.6
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 3.6e-68 262.3 191 66.0
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 3.6e-68 262.3 191 66.0
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 6.2e-68 261.5 189 65.1
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 8.1e-68 261.2 183 65.6
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 8.1e-68 261.2 184 65.8
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 5.2e-67 258.5 183 64.5
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 3.4e-66 255.8 184 63.6
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 4.4e-66 255.4 237 53.2
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 7.6e-66 254.6 184 63.6
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 6.6e-62 241.5 194 58.8
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 1.6e-60 236.9 238 51.3
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 2.8e-60 236.1 198 56.6
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 2.6e-58 229.6 240 49.2
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 5.8e-58 228.4 240 50.8
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 1.7e-57 226.9 237 49.4
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 1.7e-57 226.9 237 49.4
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.7e-57 226.9 231 48.1
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 5.1e-54 215.3 140 68.6
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 1.3e-52 210.7 219 51.6
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 1.3e-52 210.7 150 66.0
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 3.8e-49 199.1 234 42.3
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 3.0e-46 189.5 135 63.7
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 2.0e-34 150.2 75 78.7
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 1.0e-33 147.9 76 72.4
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 7.4e-13 78.6 200 30.5


User provided reference genes

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