Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62035006 Chenopodium quinoa HOM05D005471 ORTHO05D006170 1.2e-280 969.1 482 100.0
Ah.05g166980 Amaranthus hybridus HOM05D005471 ORTHO05D006170 5.8e-142 508.4 400 69.0
EL10Ac1g02354 Beta vulgaris HOM05D005471 ORTHO05D006170 2.5e-137 493.0 394 67.3
Sc02g0008090 Simmondsia chinensis HOM05D005471 ORTHO05D006170 9.0e-127 458.0 397 62.0
MELO3C010789.2 Cucumis melo HOM05D005471 ORTHO05D006170 1.8e-122 443.7 398 60.1
Lj1g0028245 Lotus japonicus HOM05D005471 ORTHO05D006170 5.7e-121 438.7 399 60.2
TPR.G30210 Trifolium pratense HOM05D005471 ORTHO05D006170 5.7e-121 438.7 399 59.4
Medtr3g103350 Medicago truncatula HOM05D005471 ORTHO05D006170 1.1e-119 434.5 399 59.4
Glyma.06G048400 Glycine max HOM05D005471 ORTHO05D006170 3.1e-119 433.0 399 58.9
Glyma.04G047500 Glycine max HOM05D005471 ORTHO05D006170 9.1e-119 431.4 365 63.6
Hma1.2p1_1170F.1_g263420 Hydrangea macrophylla HOM05D005471 ORTHO05D006170 9.1e-119 431.4 401 58.9
Thecc.08G085200 Theobroma cacao HOM05D005471 ORTHO05D006170 3.4e-118 429.5 399 59.4
COL.COLO4_28470 Corchorus olitorius HOM05D005471 ORTHO05D006170 1.0e-117 427.9 401 59.1
CsaV3_2G025960 Cucumis sativus L. HOM05D005471 ORTHO05D006170 1.7e-117 427.2 398 58.0
Phvul.009G073700 Phaseolus vulgaris HOM05D005471 ORTHO05D006170 2.9e-117 426.4 399 58.9
CSS0040686 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 8.5e-117 424.9 400 59.2
Ciclev10001411m.g Citrus clementina HOM05D005471 ORTHO05D006170 1.1e-116 424.5 399 58.9
Nn5g30656 Nelumbo nucifera HOM05D005471 ORTHO05D006170 1.4e-116 424.1 400 58.2
Atru.chr13.864 Acer truncatum HOM05D005471 ORTHO05D006170 2.5e-116 423.3 393 59.0
Dinv44934 Davidia involucrata HOM05D005471 ORTHO05D006170 2.5e-116 423.3 401 57.9
HanXRQChr09g0254061 Helianthus annuus HOM05D005471 ORTHO05D006170 2.5e-116 423.3 397 56.9
GSVIVG01009307001 Vitis vinifera HOM05D005471 ORTHO05D006170 3.2e-116 422.9 401 57.6
Gohir.D06G022300 Gossypium hirsutum HOM05D005471 ORTHO05D006170 5.5e-116 422.2 399 58.1
Gorai.010G026900 Gossypium raimondii HOM05D005471 ORTHO05D006170 5.5e-116 422.2 399 58.1
Prupe.1G419800 Prunus persica HOM05D005471 ORTHO05D006170 1.6e-115 420.6 400 59.0
Sed0019663 Sechium edule HOM05D005471 ORTHO05D006170 2.1e-115 420.2 398 57.3
ClCG08G016670 Citrullus lanatus HOM05D005471 ORTHO05D006170 3.6e-115 419.5 402 57.7
Gohir.A06G025200 Gossypium hirsutum HOM05D005471 ORTHO05D006170 4.7e-115 419.1 399 57.6
MD15G1065900 Malus domestica HOM05D005471 ORTHO05D006170 7.9e-115 418.3 402 58.5
Manes.18G048900 Manihot esculenta HOM05D005471 ORTHO05D006170 7.9e-115 418.3 398 57.8
ECA232G3342 Erigeron canadensis HOM05D005471 ORTHO05D006170 1.0e-114 417.9 397 57.7
Lalb_Chr11g0063001 Lupinus albus HOM05D005471 ORTHO05D006170 3.0e-114 416.4 397 56.9
Cfa013748 Carpinus fangiana HOM05D005471 ORTHO05D006170 5.1e-114 415.6 415 55.9
Psat5g045040 Pisum sativum HOM05D005471 ORTHO05D006170 5.1e-114 415.6 399 57.6
MD08G1078900 Malus domestica HOM05D005471 ORTHO05D006170 6.7e-114 415.2 401 57.4
HanXRQChr15g0493081 Helianthus annuus HOM05D005471 ORTHO05D006170 1.1e-113 414.5 398 56.8
Rhsim06G0064300 Rhododendron simsii HOM05D005471 ORTHO05D006170 1.5e-113 414.1 384 58.9
Lalb_Chr08g0245201 Lupinus albus HOM05D005471 ORTHO05D006170 1.3e-112 411.0 399 57.6
arahy.Tifrunner.gnm1.ann1.F72CPE Arachis hypogaea HOM05D005471 ORTHO05D006170 2.8e-112 409.8 398 57.3
Gorai.009G221700 Gossypium raimondii HOM05D005471 ORTHO05D006170 4.8e-112 409.1 399 56.4
Aqoxy6G02473 Aquilegia oxysepala HOM05D005471 ORTHO05D006170 8.2e-112 408.3 395 56.5
Lj4A753G30 Lonicera japonica HOM05D005471 ORTHO05D006170 1.8e-111 407.1 339 63.7
Gohir.D05G215000 Gossypium hirsutum HOM05D005471 ORTHO05D006170 2.4e-111 406.8 399 56.1
CiPaw.07G172600 Carya illinoinensis HOM05D005471 ORTHO05D006170 3.1e-111 406.4 414 55.3
Ca_15890_v3 Cicer arietinum L. HOM05D005471 ORTHO05D006170 4.1e-111 406.0 388 58.2
CSS0038926 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 5.3e-111 405.6 426 54.9
Lsat_1_v5_gn_2_90520 Lactuca sativa HOM05D005471 ORTHO05D006170 9.1e-111 404.8 370 59.5
arahy.Tifrunner.gnm1.ann1.P8GEK4 Arachis hypogaea HOM05D005471 ORTHO05D006170 1.5e-110 404.1 426 53.8
Migut.C00408 Erythranthe guttata HOM05D005471 ORTHO05D006170 2.0e-110 403.7 401 55.4
Solyc04g077560.3 Solanum lycopersicum HOM05D005471 ORTHO05D006170 1.7e-109 400.6 396 56.3
PGSC0003DMG400004915 Solanum tuberosum HOM05D005471 ORTHO05D006170 1.7e-109 400.6 396 56.3
Eucgr.F02230 Eucalyptus grandis HOM05D005471 ORTHO05D006170 3.8e-109 399.4 400 54.5
Sopen04g031200 Solanum pennellii HOM05D005471 ORTHO05D006170 3.8e-109 399.4 396 56.1
SGA_v2.0_scaffold74G24542 Striga asiatica HOM05D005471 ORTHO05D006170 6.5e-109 398.7 404 54.7
FvH4_2g32730 Fragaria vesca HOM05D005471 ORTHO05D006170 8.5e-109 398.3 399 55.6
RcHm_v2.0_Chr6g0309951 Rosa chinensis HOM05D005471 ORTHO05D006170 8.5e-109 398.3 390 56.2
Manes.05G183100 Manihot esculenta HOM05D005471 ORTHO05D006170 1.9e-108 397.1 395 56.5
CSS0014765 Camellia sinensis var. sinensis HOM05D005471 ORTHO05D006170 1.6e-107 394.0 401 55.6
Dinv39207 Davidia involucrata HOM05D005471 ORTHO05D006170 1.6e-107 394.0 385 57.1
MSTRG.25028 Avicennia marina HOM05D005471 ORTHO05D006170 2.7e-107 393.3 401 55.9
FAN20G2694 Fragaria x ananassa HOM05D005471 ORTHO05D006170 2.7e-107 393.3 402 55.5
TWI12G0997 Tripterygium wilfordii HOM05D005471 ORTHO05D006170 6.1e-107 392.1 401 54.9
Cc10_g07570 Coffea canephora HOM05D005471 ORTHO05D006170 5.2e-106 389.0 398 55.3
FAN15G0642 Fragaria x ananassa HOM05D005471 ORTHO05D006170 5.2e-106 389.0 402 55.0
FAN24G0217 Fragaria x ananassa HOM05D005471 ORTHO05D006170 5.2e-106 389.0 402 55.0
FAN27G0342 Fragaria x ananassa HOM05D005471 ORTHO05D006170 2.0e-105 387.1 416 53.4
AT1G59520 Arabidopsis thaliana HOM05D005471 ORTHO05D006170 4.4e-105 386.0 394 54.8
CARHR283850 Cardamine hirsuta HOM05D005471 ORTHO05D006170 5.7e-105 385.6 394 53.3
VMungo1309G2773 Vigna mungo HOM05D005471 ORTHO05D006170 7.4e-105 385.2 376 57.4
Carub.0002s0591 Capsella rubella HOM05D005471 ORTHO05D006170 1.3e-104 384.4 394 54.3
CDE02G4131 Ceratophyllum demersum HOM05D005471 ORTHO05D006170 1.3e-104 384.4 393 53.7
unitig_37.g13113 Utricularia gibba HOM05D005471 ORTHO05D006170 1.7e-104 384.0 401 54.4
Aa31LG2G10610 Aethionema arabicum HOM05D005471 ORTHO05D006170 1.1e-103 381.3 372 55.6
PSO541G0412 Papaver somniferum HOM05D005471 ORTHO05D006170 1.1e-103 381.3 396 55.8
Sabra14G0008300 Salix brachista HOM05D005471 ORTHO05D006170 1.8e-103 380.6 426 51.2
THA.LOC104819922 Tarenaya hassleriana HOM05D005471 ORTHO05D006170 4.1e-103 379.4 397 52.9
Duzib093G1789 Durio zibethinus HOM05D005471 ORTHO05D006170 9.1e-103 378.3 381 56.7
PSO675G5405 Papaver somniferum HOM05D005471 ORTHO05D006170 1.6e-102 377.5 396 54.0
ATR0739G016 Amborella trichopoda HOM05D005471 ORTHO05D006170 3.5e-102 376.3 395 52.9
A01p28660 Brassica napus HOM05D005471 ORTHO05D006170 1.0e-101 374.8 402 52.5
CiPaw.08G051800 Carya illinoinensis HOM05D005471 ORTHO05D006170 1.0e-101 374.8 413 52.5
AUR62037460 Chenopodium quinoa HOM05D005471 ORTHO05D006170 1.0e-101 374.8 208 89.4
BcaC09g49476 Brassica carinata HOM05D005471 ORTHO05D006170 2.2e-101 373.6 402 52.2
C01p36310 Brassica napus HOM05D005471 ORTHO05D006170 2.2e-101 373.6 402 52.2
Sp2g05030 Schrenkiella parvula HOM05D005471 ORTHO05D006170 3.8e-101 372.9 395 52.7
PSO170G6612 Papaver somniferum HOM05D005471 ORTHO05D006170 1.9e-100 370.5 401 52.4
BraA01t03038Z Brassica rapa HOM05D005471 ORTHO05D006170 2.5e-100 370.2 409 51.8
BolC1t03588H Brassica oleracea HOM05D005471 ORTHO05D006170 4.2e-100 369.4 409 51.6
PSO017G6379 Papaver somniferum HOM05D005471 ORTHO05D006170 9.4e-100 368.2 402 52.5
MBI16_g27035_MAGBIO Magnolia biondii HOM05D005471 ORTHO05D006170 1.6e-99 367.5 445 48.3
HPP92_007709 Vanilla planifolia HOM05D005471 ORTHO05D006170 8.0e-99 365.2 392 52.3
Nitab4.5_0002796g0080 Nicotiana tabacum HOM05D005471 ORTHO05D006170 1.4e-98 364.4 396 52.5
Gohir.A05G211700 Gossypium hirsutum HOM05D005471 ORTHO05D006170 2.3e-98 363.6 399 51.9
Gohir.D06G026900 Gossypium hirsutum HOM05D005471 ORTHO05D006170 3.8e-93 346.3 360 55.6
Os07g0248800 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 3.8e-93 346.3 388 50.3
Os10g0102900 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 3.8e-93 346.3 388 50.3
Nitab4.5_0001426g0050 Nicotiana tabacum HOM05D005471 ORTHO05D006170 1.5e-92 344.4 431 47.3
Os04g0183100 Oryza sativa ssp. japonica HOM05D005471 ORTHO05D006170 3.2e-92 343.2 397 49.4
PGR031G3068 Punica granatum HOM05D005471 ORTHO05D006170 9.4e-92 341.7 355 55.2
BcaC09g49477 Brassica carinata HOM05D005471 ORTHO05D006170 2.1e-91 340.5 387 51.7
Nitab4.5_0006888g0020 Nicotiana tabacum HOM05D005471 ORTHO05D006170 8.0e-91 338.6 376 52.4
Thhalv10023553m.g Eutrema salsugineum HOM05D005471 ORTHO05D006170 1.8e-90 337.4 402 48.3
Zm00001eb025640 Zea mays HOM05D005471 ORTHO05D006170 3.7e-88 329.7 390 48.5
TAR625G0189 Trochodendron aralioides HOM05D005471 ORTHO05D006170 3.5e-86 323.2 234 72.6
DCAR_019346 Daucus carota HOM05D005471 ORTHO05D006170 5.0e-85 319.3 404 47.0
Lsat_1_v5_gn_1_56140 Lactuca sativa HOM05D001400 ORTHO05D001795 1.1e-84 318.2 395 48.9
BcaB04g20211 Brassica carinata HOM05D005471 ORTHO05D006170 2.3e-82 310.5 352 51.7
Peaxi162Scf00340g00069 Petunia axillaris HOM05D005471 ORTHO05D006170 1.8e-79 300.8 437 43.0
Pp3c17_20680 Physcomitrium patens HOM05D005471 ORTHO05D006170 1.1e-66 258.5 403 40.4
Potri.014G013500 Populus trichocarpa HOM05D005471 ORTHO05D006170 5.2e-66 256.1 281 49.8
Cpa.g.sc142.57 Carica papaya HOM05D005471 ORTHO05D006170 2.1e-62 244.2 308 45.5
Mapoly0067s0099 Marchantia polymorpha HOM05D005471 ORTHO05D006170 1.7e-61 241.1 405 39.0
QL12p038448 Quercus lobata HOM05D005471 ORTHO05D006170 9.9e-57 225.3 307 44.0
CBR_g49495 Chara braunii HOM05D005471 ORTHO05D006170 2.9e-56 223.8 422 36.3
SMO117G0302 Selaginella moellendorffii HOM05D005471 ORTHO05D006170 4.9e-56 223.0 383 37.6
AagrBONN_evm.TU.Sc2ySwM_368.1412 Anthoceros agrestis HOM05D005471 ORTHO05D006170 6.4e-56 222.6 403 37.5
vmacro21421 Vaccinium macrocarpon HOM05D005471 ORTHO05D006170 2.1e-51 207.6 286 43.4
vmacro21420 Vaccinium macrocarpon HOM05D005471 ORTHO05D006170 3.4e-49 200.3 136 78.7
DCAR_020058 Daucus carota HOM05D005471 ORTHO05D006170 4.8e-43 179.9 228 44.3
Haze_22407 Corylus avellana HOM05D005471 ORTHO05D006170 1.6e-30 138.3 229 42.4
Haze_22399 Corylus avellana HOM05D005471 ORTHO05D006170 2.1e-30 137.9 229 42.4
Psat5g037200 Pisum sativum HOM05D005471 ORTHO05D006170 2.7e-30 137.5 112 56.2
Gohir.D04G027975 Gossypium hirsutum HOM05D005471 ORTHO05D006170 6.0e-30 136.3 109 65.1
Hund05280 Selenicereus undatus HOM05D005471 ORTHO05D006170 6.0e-30 136.3 111 60.4
Gorai.012G030800 Gossypium raimondii HOM05D005471 ORTHO05D006170 1.8e-29 134.8 109 64.2
Gohir.D12G192766 Gossypium hirsutum HOM05D005471 ORTHO05D006170 3.0e-29 134.0 109 65.1
Gohir.A12G016250 Gossypium hirsutum HOM05D005471 ORTHO05D006170 2.1e-27 127.9 109 62.4
QL12p038454 Quercus lobata HOM05D005471 ORTHO05D006170 1.0e-24 119.0 109 63.3
DCAR_020059 Daucus carota HOM05D005471 ORTHO05D006170 1.4e-23 115.2 96 69.8
Peaxi162Scf00448g00027 Petunia axillaris HOM05D005471 ORTHO05D006170 1.6e-22 111.7 111 59.5
Phvul.009G072300 Phaseolus vulgaris HOM05D005471 ORTHO05D000997 2.3e-21 107.8 159 42.8
Cpa.g.sc142.58 Carica papaya HOM05D005471 ORTHO05D006170 4.8e-19 100.1 78 67.9
SHI08425 Sapria himalayana HOM05D005471 ORTHO05D006170 1.0e-16 92.4 116 46.6
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.0e-13 82.4 60 63.3
Gorai.001G227100 Gossypium raimondii HOM05D005471 ORTHO05D006170 1.0e-13 82.4 59 69.5
SEGI_08278 Sequoiadendron giganteum HOM05D005471 ORTHO05D006170 3.9e-13 80.5 115 38.3
Cre07.g320250 Chlamydomonas reinhardtii HOM05D005471 ORTHO05D006170 6.9e-10 69.7 203 30.5
SEGI_29276 Sequoiadendron giganteum HOM05D005471 ORTHO05D006170 5.9e-09 66.6 82 50.0
CAN.G213.23 Capsicum annuum HOM05D005471 ORTHO05D006170 2.2e-08 64.7 59 54.2
Gohir.D11G128350 Gossypium hirsutum HOM05D005471 ORTHO05D006170 7.9e-06 56.2 42 64.3


User provided reference genes

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