Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 1.3e-120 436.4 214 100.0
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 3.5e-54 215.7 112 95.5
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 2.5e-44 183.0 114 81.6
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 4.0e-42 175.6 112 77.7
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 4.0e-42 175.6 115 73.9
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 3.4e-41 172.6 115 73.9
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 9.8e-41 171.0 136 66.9
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 1.3e-40 170.6 115 73.9
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 2.9e-40 169.5 115 73.0
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 1.8e-39 166.8 110 76.4
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 9.2e-39 164.5 121 69.4
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 2.0e-38 163.3 111 74.8
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 2.7e-38 162.9 121 70.2
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 3.5e-38 162.5 96 81.2
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 4.6e-38 162.2 98 77.6
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 5.9e-38 161.8 118 69.5
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 5.9e-38 161.8 115 65.2
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 1.3e-37 160.6 113 70.8
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 1.7e-37 160.2 109 74.3
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 3.0e-37 159.5 107 72.0
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 3.9e-37 159.1 132 57.6
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 3.9e-37 159.1 125 60.0
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 3.9e-37 159.1 123 65.9
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 5.0e-37 158.7 125 65.6
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 6.6e-37 158.3 130 62.3
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 8.6e-37 157.9 112 69.6
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 1.5e-36 157.1 113 70.8
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 2.5e-36 156.4 106 71.7
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 4.3e-36 155.6 113 68.1
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 4.3e-36 155.6 112 71.4
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 4.3e-36 155.6 112 69.6
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 4.3e-36 155.6 121 66.1
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 5.6e-36 155.2 93 76.3
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 7.3e-36 154.8 112 68.8
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 7.3e-36 154.8 123 63.4
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 7.3e-36 154.8 114 65.8
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 9.5e-36 154.5 111 69.4
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 9.5e-36 154.5 116 65.5
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 1.2e-35 154.1 115 64.3
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 2.1e-35 153.3 138 58.0
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 2.1e-35 153.3 119 65.5
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 2.1e-35 153.3 129 61.2
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 3.6e-35 152.5 137 58.4
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 4.7e-35 152.1 124 62.1
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 6.2e-35 151.8 117 65.0
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 8.0e-35 151.4 116 66.4
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 1.0e-34 151.0 109 67.9
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 1.8e-34 150.2 156 54.5
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 3.1e-34 149.4 161 51.6
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 3.1e-34 149.4 161 51.6
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 3.1e-34 149.4 161 51.6
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 4.0e-34 149.1 119 63.9
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 5.2e-34 148.7 108 63.9
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 3.4e-33 146.0 110 67.3
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 4.4e-33 145.6 119 63.9
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 4.4e-33 145.6 108 66.7
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 5.8e-33 145.2 117 64.1
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 1.3e-32 144.1 117 60.7
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 1.7e-32 143.7 100 70.0
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 2.2e-32 143.3 108 67.6
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 2.9e-32 142.9 107 66.4
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 2.9e-32 142.9 107 66.4
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 2.9e-32 142.9 86 79.1
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 3.7e-32 142.5 122 58.2
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 6.4e-32 141.7 121 58.7
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 1.4e-31 140.6 109 64.2
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 1.4e-31 140.6 121 57.0
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 5.4e-31 138.7 110 62.7
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 7.0e-31 138.3 109 66.1
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 7.0e-31 138.3 89 75.3
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 7.0e-31 138.3 149 50.3
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 2.7e-30 136.3 112 59.8
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 2.3e-29 133.3 116 62.1
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 2.3e-29 133.3 109 58.7
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 5.0e-29 132.1 108 58.3
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 5.0e-29 132.1 89 73.0
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 1.1e-28 131.0 99 66.7
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 2.5e-28 129.8 86 69.8
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 2.1e-27 126.7 89 65.2
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 8.9e-26 121.3 94 61.7
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 8.9e-26 121.3 77 76.6
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 7.5e-25 118.2 86 62.8
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 1.9e-20 103.6 87 54.0
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 1.9e-20 103.6 70 67.1
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 4.3e-20 102.4 89 64.0
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 6.8e-18 95.1 87 54.0
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 9.2e-15 84.7 125 40.0
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 1.6e-11 73.9 62 61.3
FAN07G1480 Fragaria x ananassa HOM05D007597 ORTHO05D009608 6.9e-10 68.6 60 63.3
FAN07G2660 Fragaria x ananassa HOM05D007597 ORTHO05D009608 6.9e-10 68.6 60 63.3
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 8.9e-10 68.2 71 53.5
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 8.9e-10 68.2 56 67.9
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 2.0e-09 67.0 89 41.6
Manes.17G084450 Manihot esculenta HOM05D007597 ORTHO05D000073 2.9e-08 63.2 39 79.5
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 1.4e-07 60.8 46 67.4
Glyma.07G171100 Glycine max HOM05D007597 ORTHO05D009608 6.0e-06 55.5 62 48.4


User provided reference genes

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