Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62034975 Chenopodium quinoa HOM05D008077 ORTHO05D010221 2.3e-122 442.2 217 100.0
AUR62039341 Chenopodium quinoa HOM05D008077 ORTHO05D010221 7.2e-108 394.0 217 89.9
EL10Ac1g02339 Beta vulgaris HOM05D008077 ORTHO05D010221 5.2e-74 281.6 214 66.4
Hund05263 Selenicereus undatus HOM05D008077 ORTHO05D010221 2.4e-50 203.0 166 61.4
Haze_22366 Corylus avellana HOM05D008077 ORTHO05D010221 1.4e-47 193.7 212 45.8
Sc02g0008240 Simmondsia chinensis HOM05D008077 ORTHO05D010221 1.2e-46 190.7 189 49.2
Cfa013722 Carpinus fangiana HOM05D008077 ORTHO05D010221 1.0e-45 187.6 212 45.3
TWI56G0834 Tripterygium wilfordii HOM05D008077 ORTHO05D010221 5.1e-45 185.3 213 43.7
QL09p016211 Quercus lobata HOM05D008077 ORTHO05D010221 8.7e-45 184.5 212 43.4
GSVIVG01009281001 Vitis vinifera HOM05D008077 ORTHO05D010221 8.7e-45 184.5 208 45.7
Manes.18G051200 Manihot esculenta HOM05D008077 ORTHO05D010221 1.5e-44 183.7 160 53.8
Dinv39194 Davidia involucrata HOM05D008077 ORTHO05D010221 3.3e-44 182.6 216 44.4
Potri.005G149500 Populus trichocarpa HOM05D008077 ORTHO05D010221 9.6e-44 181.0 201 46.8
Atru.chr13.887 Acer truncatum HOM05D008077 ORTHO05D010221 2.1e-43 179.9 220 45.0
Dinv44921 Davidia involucrata HOM05D008077 ORTHO05D010221 3.6e-43 179.1 212 45.8
Duzib116G0694 Durio zibethinus HOM05D008077 ORTHO05D010221 3.6e-43 179.1 199 46.2
Thecc.08G082700 Theobroma cacao HOM05D008077 ORTHO05D010221 1.1e-42 177.6 212 45.3
Hma1.2p1_4204F.1_g338450 Hydrangea macrophylla HOM05D008077 ORTHO05D010221 1.8e-42 176.8 211 44.1
CiPaw.08G053400 Carya illinoinensis HOM05D008077 ORTHO05D010221 1.2e-41 174.1 161 49.1
VMungo0647G0255 Vigna mungo HOM05D008077 ORTHO05D010221 5.8e-41 171.8 211 44.1
TAR376G0563 Trochodendron aralioides HOM05D008077 ORTHO05D010221 3.8e-40 169.1 161 49.7
Phvul.001G032000 Phaseolus vulgaris HOM05D008077 ORTHO05D010221 1.1e-39 167.5 208 43.3
RcHm_v2.0_Chr6g0310221 Rosa chinensis HOM05D008077 ORTHO05D010221 1.1e-39 167.5 200 45.0
Glyma.17G232225 Glycine max HOM05D008077 ORTHO05D010221 4.2e-39 165.6 160 51.2
Sabra05G0118800 Salix brachista HOM05D008077 ORTHO05D010221 4.2e-39 165.6 161 49.7
CSS0006446 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 5.5e-39 165.2 163 47.9
CSS0048473 Camellia sinensis var. sinensis HOM05D008077 ORTHO05D010221 9.3e-39 164.5 161 48.4
arahy.Tifrunner.gnm1.ann1.JS0EE0 Arachis hypogaea HOM05D008077 ORTHO05D010221 7.9e-38 161.4 154 50.0
Lalb_Chr14g0367971 Lupinus albus HOM05D008077 ORTHO05D010221 7.9e-38 161.4 205 42.0
Ca_06992_v3 Cicer arietinum L. HOM05D008077 ORTHO05D010221 1.0e-37 161.0 206 42.2
Medtr1g017160 Medicago truncatula HOM05D008077 ORTHO05D010221 3.9e-37 159.1 166 47.0
PSO541G6554 Papaver somniferum HOM05D008077 ORTHO05D010221 3.9e-37 159.1 214 41.1
Prupe.1G417600 Prunus persica HOM05D008077 ORTHO05D010221 5.1e-37 158.7 213 39.0
arahy.Tifrunner.gnm1.ann1.PWM57A Arachis hypogaea HOM05D008077 ORTHO05D010221 6.7e-37 158.3 154 49.4
Glyma.14G090800 Glycine max HOM05D008077 ORTHO05D010221 1.5e-36 157.1 216 42.6
CANSAT25G0587 Cannabis sativa HOM05D008077 ORTHO05D010221 1.9e-36 156.8 151 51.0
MD08G1076300 Malus domestica HOM05D008077 ORTHO05D010221 9.6e-36 154.5 202 43.6
Psat6g018560 Pisum sativum HOM05D008077 ORTHO05D010221 9.6e-36 154.5 150 48.7
TPR.G13063 Trifolium pratense HOM05D008077 ORTHO05D010221 1.3e-35 154.1 196 40.8
Ciclev10002390m.g Citrus clementina HOM05D008077 ORTHO05D010221 6.2e-35 151.8 208 42.3
Nn6g34549 Nelumbo nucifera HOM05D008077 ORTHO05D010221 1.1e-34 151.0 215 39.5
Actinidia19284 Actinidia chinensis HOM05D008077 ORTHO05D010221 1.8e-34 150.2 161 46.0
Gohir.D01G112200 Gossypium hirsutum HOM05D008077 ORTHO05D010221 5.3e-34 148.7 199 41.7
PGR031G0263 Punica granatum HOM05D008077 ORTHO05D010221 5.3e-34 148.7 195 41.0
Gorai.002G137100 Gossypium raimondii HOM05D008077 ORTHO05D010221 6.9e-34 148.3 164 46.3
Eucgr.F02208 Eucalyptus grandis HOM05D008077 ORTHO05D010221 4.5e-33 145.6 162 45.1
FAN24G1375 Fragaria x ananassa HOM05D008077 ORTHO05D010221 1.0e-32 144.4 169 43.2
FAN20G1346 Fragaria x ananassa HOM05D008077 ORTHO05D010221 1.7e-32 143.7 169 41.4
MSTRG.22201 Avicennia marina HOM05D008077 ORTHO05D010221 2.2e-32 143.3 153 45.1
CsaV3_4G035360 Cucumis sativus L. HOM05D008077 ORTHO05D010221 2.2e-32 143.3 168 42.9
Gohir.A01G124500 Gossypium hirsutum HOM05D008077 ORTHO05D010221 2.2e-32 143.3 164 45.7
PSO675G3170 Papaver somniferum HOM05D008077 ORTHO05D010221 2.9e-32 142.9 213 38.0
ClCG05G017630 Citrullus lanatus HOM05D008077 ORTHO05D010221 3.8e-32 142.5 166 42.2
THA.LOC104806984 Tarenaya hassleriana HOM05D008077 ORTHO05D010221 6.5e-32 141.7 210 37.6
FvH4_2g32450 Fragaria vesca HOM05D008077 ORTHO05D010221 1.4e-31 140.6 169 42.0
Cc10_g07800 Coffea canephora HOM05D008077 ORTHO05D010221 7.1e-31 138.3 205 37.6
Oeu048561.1 Olea europaea HOM05D008077 ORTHO05D010221 9.3e-31 137.9 145 42.8
Actinidia10235 Actinidia chinensis HOM05D008077 ORTHO05D010221 3.5e-30 136.0 163 38.7
MBI16_g09811_MAGBIO Magnolia biondii HOM05D008077 ORTHO05D010221 3.5e-30 136.0 153 43.8
FAN27G3028 Fragaria x ananassa HOM05D008077 ORTHO05D010221 3.3e-28 129.4 199 37.2
Sed0028055 Sechium edule HOM05D008077 ORTHO05D010221 9.0e-26 121.3 129 48.1
FAN15G0649 Fragaria x ananassa HOM05D008077 ORTHO05D010221 1.2e-25 120.9 169 39.1
Lj5g0022198 Lotus japonicus HOM05D008077 ORTHO05D010221 4.5e-25 119.0 185 41.6
CDE06G2465 Ceratophyllum demersum HOM05D008077 ORTHO05D010221 1.0e-24 117.9 154 42.2
Migut.N02805 Erythranthe guttata HOM05D008077 ORTHO05D010221 1.7e-24 117.1 140 42.9
COL.COLO4_28429 Corchorus olitorius HOM05D008077 ORTHO05D010221 3.2e-23 112.8 142 44.4
unitig_578.g16165 Utricularia gibba HOM05D008077 ORTHO05D010221 1.9e-20 103.6 125 40.8
MELO3C016846.2 Cucumis melo HOM05D008077 ORTHO05D010221 6.3e-19 98.6 113 43.4
HPP92_006033 Vanilla planifolia HOM05D008077 ORTHO05D010221 1.4e-18 97.4 110 37.3
SGA_v2.0_scaffold152G36867 Striga asiatica HOM05D008077 ORTHO05D010221 6.1e-14 82.0 87 46.0
TPR.G13160 Trifolium pratense HOM05D008077 ORTHO05D010221 1.0e-13 81.3 211 28.0
SEGI_41084 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 4.8e-11 72.4 189 28.0
Aqoxy2G00166 Aquilegia oxysepala HOM05D007054 ORTHO05D008888 1.4e-10 70.9 147 27.2
MBI16_g08580_MAGBIO Magnolia biondii HOM05D007054 ORTHO05D008888 4.1e-10 69.3 207 26.1
Gohir.A12G026500 Gossypium hirsutum HOM05D007054 ORTHO05D008888 6.9e-10 68.6 161 28.6
Gohir.D12G026100 Gossypium hirsutum HOM05D007054 ORTHO05D008888 9.1e-10 68.2 161 28.6
Gorai.008G026400 Gossypium raimondii HOM05D007054 ORTHO05D008888 9.1e-10 68.2 161 28.6
CDE02G0602 Ceratophyllum demersum HOM05D007054 ORTHO05D008888 1.5e-09 67.4 149 29.5
PGR142G2758 Punica granatum HOM05D007054 ORTHO05D008888 1.5e-09 67.4 134 30.6
Manes.15G143900 Manihot esculenta HOM05D007054 ORTHO05D008888 4.5e-09 65.9 184 25.5
CANSAT25G2549 Cannabis sativa HOM05D007054 ORTHO05D008888 1.0e-08 64.7 139 28.8
Cfa005418 Carpinus fangiana HOM05D007054 ORTHO05D008888 1.3e-08 64.3 152 25.0
Duzib132G1179 Durio zibethinus HOM05D007054 ORTHO05D008888 1.3e-08 64.3 198 25.8
Oeu057672.1 Olea europaea HOM05D007054 ORTHO05D008888 1.3e-08 64.3 134 27.6
GSVIVG01031807001 Vitis vinifera HOM05D007054 ORTHO05D008888 1.3e-08 64.3 177 25.4
Ca_12472_v3 Cicer arietinum L. HOM05D007054 ORTHO05D008888 2.2e-08 63.5 139 28.1
CsaV3_7G008860 Cucumis sativus L. HOM05D007054 ORTHO05D008888 2.2e-08 63.5 145 26.2
Hma1.2p1_1543F.1_g289790 Hydrangea macrophylla HOM05D007054 ORTHO05D008888 2.2e-08 63.5 141 30.5
Lj9C361T14 Lonicera japonica HOM05D007054 ORTHO05D008888 2.9e-08 63.2 135 27.4
Oeu021925.1 Olea europaea HOM05D007054 ORTHO05D008888 3.8e-08 62.8 139 27.3
Lj2g0019135 Lotus japonicus HOM05D007054 ORTHO05D008888 5.0e-08 62.4 154 25.3
Psat6g096080 Pisum sativum HOM05D007054 ORTHO05D008888 6.5e-08 62.0 139 25.9
ATR0767G176 Amborella trichopoda HOM05D007054 ORTHO05D008888 8.5e-08 61.6 194 25.3
Dinv42118 Davidia involucrata HOM05D007054 ORTHO05D008888 8.5e-08 61.6 139 28.1
CSS0047307 Camellia sinensis var. sinensis HOM05D007054 ORTHO05D008888 1.1e-07 61.2 139 27.3
Carub.0001s3870 Capsella rubella HOM05D007054 ORTHO05D008888 1.1e-07 61.2 135 24.4
Haze_01879 Corylus avellana HOM05D007054 ORTHO05D008888 1.1e-07 61.2 157 25.5
Lalb_Chr01g0013331 Lupinus albus HOM05D007054 ORTHO05D008888 1.4e-07 60.8 157 26.8
MD15G1063400 Malus domestica HOM05D008077 ORTHO05D010221 1.4e-07 60.8 82 36.6
Ciclev10029145m.g Citrus clementina HOM05D007054 ORTHO05D008888 1.9e-07 60.5 178 24.7
MELO3C018427.2 Cucumis melo HOM05D007054 ORTHO05D008888 1.9e-07 60.5 145 25.5
TPR.G11147 Trifolium pratense HOM05D007054 ORTHO05D008888 2.5e-07 60.1 139 24.5
Medtr1g034050 Medicago truncatula HOM05D007054 ORTHO05D008888 3.2e-07 59.7 134 25.4
Atru.chr5.2831 Acer truncatum HOM05D007054 ORTHO05D008888 4.2e-07 59.3 134 26.1
Ah.01g002690 Amaranthus hybridus HOM05D007054 ORTHO05D008888 4.2e-07 59.3 147 22.4
QL11p038609 Quercus lobata HOM05D007054 ORTHO05D008888 4.2e-07 59.3 139 27.3
CARHR039530 Cardamine hirsuta HOM05D007054 ORTHO05D008888 5.5e-07 58.9 135 23.7
CiPaw.05G055500 Carya illinoinensis HOM05D007054 ORTHO05D008888 5.5e-07 58.9 139 25.9
MD00G1050600 Malus domestica HOM05D007054 ORTHO05D008888 5.5e-07 58.9 150 26.0
Phvul.003G012100 Phaseolus vulgaris HOM05D007054 ORTHO05D008888 5.5e-07 58.9 203 26.1
SEGI_26902 Sequoiadendron giganteum HOM05D007054 ORTHO05D008888 7.2e-07 58.5 191 23.0
ClCG02G005650 Citrullus lanatus HOM05D007054 ORTHO05D008888 9.4e-07 58.2 145 25.5
Prupe.8G115700 Prunus persica HOM05D007054 ORTHO05D008888 9.4e-07 58.2 139 25.9
Thhalv10011746m.g Eutrema salsugineum HOM05D007054 ORTHO05D008888 1.6e-06 57.4 135 23.0
arahy.Tifrunner.gnm1.ann1.LAP5IF Arachis hypogaea HOM05D007054 ORTHO05D008888 2.1e-06 57.0 141 24.8
AL1G56860 Arabidopsis lyrata HOM05D007054 ORTHO05D008888 2.7e-06 56.6 135 22.2
arahy.Tifrunner.gnm1.ann1.M7JB84 Arachis hypogaea HOM05D007054 ORTHO05D008888 3.6e-06 56.2 149 24.8
RcHm_v2.0_Chr6g0259351 Rosa chinensis HOM05D007054 ORTHO05D008888 6.1e-06 55.5 139 25.9
TAR625G1358 Trochodendron aralioides HOM05D007054 ORTHO05D008888 6.1e-06 55.5 131 25.2


User provided reference genes

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