Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 1.6e-123 447.6 633 100.0
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 8.0e-107 392.1 633 94.2
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 4.9e-80 303.1 629 84.7
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 9.9e-49 199.1 617 81.8
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 2.2e-48 198.0 626 82.1
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 6.4e-48 196.4 622 81.5
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 1.8e-45 188.3 620 75.6
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 2.8e-43 181.0 617 76.0
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 8.2e-43 179.5 170 52.4
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.1e-42 179.1 617 79.1
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 5.8e-41 173.3 148 62.8
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 3.2e-39 167.5 161 51.6
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 9.3e-39 166.0 161 51.6
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 4.6e-38 163.7 617 78.6
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 2.3e-37 161.4 616 72.1
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 1.1e-36 159.1 149 54.4
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 2.5e-36 157.9 617 78.3
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 2.5e-36 157.9 617 78.3
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 3.3e-36 157.5 158 52.5
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 7.4e-36 156.4 166 49.4
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 2.8e-35 154.5 173 45.7
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 3.7e-35 154.1 144 52.8
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 8.2e-35 152.9 121 67.8
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 1.8e-34 151.8 114 66.7
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 1.5e-33 148.7 125 60.0
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 2.0e-33 148.3 173 44.5
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 2.6e-33 147.9 158 48.7
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 2.2e-32 144.8 112 67.0
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 3.8e-32 144.1 144 50.0
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 1.1e-31 142.5 107 66.4
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 9.3e-31 139.4 118 61.9
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 1.2e-30 139.0 116 59.5
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 2.7e-30 137.9 112 61.6
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 3.6e-30 137.5 106 62.3
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 4.6e-30 137.1 125 56.0
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 7.9e-30 136.3 143 53.1
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 1.0e-29 136.0 105 65.7
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 1.0e-29 136.0 115 58.3
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 1.0e-29 136.0 113 60.2
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 1.0e-29 136.0 123 56.9
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 1.8e-29 135.2 114 57.0
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 1.8e-29 135.2 107 62.6
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 2.3e-29 134.8 107 63.6
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 3.9e-29 134.0 110 61.8
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 5.1e-29 133.7 123 56.1
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 6.7e-29 133.3 112 59.8
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 6.7e-29 133.3 107 62.6
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 6.7e-29 133.3 107 63.6
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 8.7e-29 132.9 107 60.7
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 8.7e-29 132.9 107 59.8
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 8.7e-29 132.9 116 57.8
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 1.1e-28 132.5 107 64.5
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 1.5e-28 132.1 107 60.7
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 1.5e-28 132.1 107 60.7
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 1.9e-28 131.7 105 63.8
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 1.9e-28 131.7 110 60.0
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 2.5e-28 131.3 107 63.6
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 3.3e-28 131.0 106 60.4
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 4.3e-28 130.6 105 61.0
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 4.3e-28 130.6 106 60.4
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 7.4e-28 129.8 106 60.4
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 7.4e-28 129.8 106 60.4
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 7.4e-28 129.8 106 60.4
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 9.7e-28 129.4 116 54.3
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 1.6e-27 128.6 120 55.0
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 1.6e-27 128.6 120 55.0
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 2.2e-27 128.3 105 60.0
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 2.2e-27 128.3 105 59.0
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 2.2e-27 128.3 109 60.6
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 2.8e-27 127.9 103 63.1
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 2.8e-27 127.9 103 64.1
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 2.8e-27 127.9 116 56.0
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 2.8e-27 127.9 104 60.6
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 1.4e-26 125.6 105 61.9
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 2.4e-26 124.8 110 58.2
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 4.1e-26 124.0 107 56.1
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 4.1e-26 124.0 107 57.0
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 5.3e-26 123.6 165 46.1
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 6.9e-26 123.2 106 57.5
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 9.1e-26 122.9 107 56.1
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 9.1e-26 122.9 107 56.1
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 1.2e-25 122.5 111 59.5
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 1.5e-25 122.1 106 56.6
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 2.0e-25 121.7 98 62.2
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 2.6e-25 121.3 115 53.9
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 2.6e-25 121.3 115 53.9
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 3.4e-25 120.9 103 61.2
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 3.4e-25 120.9 152 42.8
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 4.5e-25 120.6 99 63.6
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 1.3e-24 119.0 143 45.5
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 6.5e-24 116.7 116 50.9
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 8.5e-24 116.3 113 53.1
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 1.4e-23 115.5 100 58.0
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 1.2e-22 112.5 106 54.7
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 2.7e-22 111.3 105 50.5
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 4.6e-22 110.5 132 43.2
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 1.4e-21 109.0 113 49.6
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 2.3e-21 108.2 75 66.7
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.6e-20 104.8 80 62.5
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 5.7e-20 103.6 80 61.2
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 9.7e-20 102.8 99 49.5
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 2.4e-18 98.2 168 33.9
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 1.2e-17 95.9 159 37.7
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 4.5e-17 94.0 72 61.1
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 6.5e-16 90.1 107 43.9
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 9.4e-15 86.3 155 32.3
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 7.9e-14 83.2 82 50.0
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 1.0e-13 82.8 171 33.3
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 3.0e-13 81.3 66 60.6
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 4.8e-11 73.9 80 50.0
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 4.8e-11 73.9 80 50.0
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 1.1e-10 72.8 58 63.8
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 4.1e-10 70.9 57 57.9
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 9.1e-10 69.7 67 55.2
Aa31LG1G15500 Aethionema arabicum HOM05D000424 ORTHO05D000355 3.6e-06 57.8 147 23.8
Sed0014952 Sechium edule HOM05D000424 ORTHO05D000355 4.7e-06 57.4 160 27.5


User provided reference genes

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