Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62034894 Chenopodium quinoa HOM05D003952 ORTHO05D005083 0.0e+00 2401.3 1236 100.0
EL10Ac1g01605 Beta vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 2029.6 1282 83.8
AUR62026637 Chenopodium quinoa HOM05D003952 ORTHO05D005083 0.0e+00 1989.9 1108 94.4
Sc20g0003770 Simmondsia chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1863.2 1231 78.5
Thecc.08G159400 Theobroma cacao HOM05D003952 ORTHO05D005083 0.0e+00 1784.2 1233 75.5
Haze_17805 Corylus avellana HOM05D003952 ORTHO05D005083 0.0e+00 1776.1 1234 74.6
Cfa018280 Carpinus fangiana HOM05D003952 ORTHO05D005083 0.0e+00 1772.3 1231 74.4
Potri.005G196700 Populus trichocarpa HOM05D003952 ORTHO05D005083 0.0e+00 1771.1 1228 74.9
TAR628G1191 Trochodendron aralioides HOM05D003952 ORTHO05D005083 0.0e+00 1766.9 1231 74.4
QL02p037499 Quercus lobata HOM05D003952 ORTHO05D005083 0.0e+00 1762.3 1233 74.5
QL02p038017 Quercus lobata HOM05D003952 ORTHO05D005083 0.0e+00 1761.1 1233 74.5
Duzib093G1052 Durio zibethinus HOM05D003952 ORTHO05D005083 0.0e+00 1760.7 1233 74.5
Sabra05G0149800 Salix brachista HOM05D003952 ORTHO05D005083 0.0e+00 1756.1 1239 73.9
Potri.002G064400 Populus trichocarpa HOM05D003952 ORTHO05D005083 0.0e+00 1744.9 1229 74.9
CSS0032669 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1740.7 1232 73.9
Prupe.8G040600 Prunus persica HOM05D003952 ORTHO05D005083 0.0e+00 1740.7 1232 73.8
Gorai.009G258800 Gossypium raimondii HOM05D003952 ORTHO05D005083 0.0e+00 1740.3 1237 74.2
Gohir.D05G248000 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1739.5 1237 74.2
Gohir.A05G246500 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1735.3 1233 74.3
CiPaw.15G012400 Carya illinoinensis HOM05D003952 ORTHO05D005083 0.0e+00 1730.3 1232 73.5
MD10G1034200 Malus domestica HOM05D003952 ORTHO05D005083 0.0e+00 1728.0 1232 73.4
RcHm_v2.0_Chr6g0274251 Rosa chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1727.2 1246 72.7
Atru.chr13.2009 Acer truncatum HOM05D003952 ORTHO05D005083 0.0e+00 1722.6 1231 73.6
Duzib116G0427 Durio zibethinus HOM05D003952 ORTHO05D005083 0.0e+00 1719.5 1233 73.4
MD05G1033400 Malus domestica HOM05D003952 ORTHO05D005083 0.0e+00 1718.7 1232 73.5
FvH4_2g13030 Fragaria vesca HOM05D003952 ORTHO05D005083 0.0e+00 1712.6 1242 72.8
Cc10_g15270 Coffea canephora HOM05D003952 ORTHO05D005083 0.0e+00 1710.3 1231 73.1
CSS0017406 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1708.0 1232 72.5
Eucgr.F02686 Eucalyptus grandis HOM05D003952 ORTHO05D005083 0.0e+00 1704.1 1226 71.9
TWI60G0338 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1703.3 1232 71.4
arahy.Tifrunner.gnm1.ann1.2T81X8 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1699.5 1244 71.9
Gohir.A02G062600 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1699.5 1233 73.5
FAN27G2428 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1697.9 1280 70.7
Ah.05g168180 Amaranthus hybridus HOM05D003952 ORTHO05D005083 0.0e+00 1697.2 1076 83.9
FAN15G1441 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1697.2 1276 70.8
Glyma.10G221500 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1697.2 1233 72.6
Gorai.005G077100 Gossypium raimondii HOM05D003952 ORTHO05D005083 0.0e+00 1696.4 1233 73.2
Sabra02G0051500 Salix brachista HOM05D003952 ORTHO05D005083 0.0e+00 1695.6 1286 70.4
FAN24G3461 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1694.5 1280 70.5
arahy.Tifrunner.gnm1.ann1.5NL3D9 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1692.6 1244 71.6
Phvul.007G083500 Phaseolus vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1692.2 1255 71.6
Gohir.D02G068200 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1691.4 1233 73.1
FAN20G1325 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1689.9 1280 70.5
PGR042G0685 Punica granatum HOM05D003952 ORTHO05D005083 0.0e+00 1689.5 1233 71.6
VMungo0720G2354 Vigna mungo HOM05D003952 ORTHO05D005083 0.0e+00 1686.4 1262 71.0
Lalb_Chr02g0141571 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1686.0 1229 71.8
TWI32G0799 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1683.7 1239 71.0
SalBow7G2315 Salvia bowleyana HOM05D003952 ORTHO05D005083 0.0e+00 1683.3 1235 71.8
TWI34G1640 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1681.4 1236 71.5
MSTRG.24931 Avicennia marina HOM05D003952 ORTHO05D005083 0.0e+00 1679.1 1233 71.4
Medtr1g098160 Medicago truncatula HOM05D003952 ORTHO05D005083 0.0e+00 1679.1 1241 71.3
arahy.Tifrunner.gnm1.ann1.SZWP5S Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1676.4 1234 72.0
Glyma.20G170000 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1674.8 1231 71.6
Rhsim11G0087700 Rhododendron simsii HOM05D003952 ORTHO05D005083 0.0e+00 1674.4 1271 70.6
DCAR_001164 Daucus carota HOM05D003952 ORTHO05D005083 0.0e+00 1665.6 1232 70.7
Peaxi162Scf00360g00418 Petunia axillaris HOM05D003952 ORTHO05D005083 0.0e+00 1664.0 1235 71.7
Nn008s41421 Nelumbo nucifera HOM05D003952 ORTHO05D005083 0.0e+00 1663.7 1236 70.7
Lalb_Chr06g0161721 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1663.3 1227 71.4
Nn5g28824 Nelumbo nucifera HOM05D003952 ORTHO05D005083 0.0e+00 1661.4 1236 71.3
Lj5g0005273 Lotus japonicus HOM05D003952 ORTHO05D005083 0.0e+00 1661.0 1235 71.6
arahy.Tifrunner.gnm1.ann1.AF3FG0 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1657.9 1266 70.1
vmacro01493 Vaccinium macrocarpon HOM05D003952 ORTHO05D005083 0.0e+00 1657.9 1268 70.0
MSTRG.22108 Avicennia marina HOM05D003952 ORTHO05D005083 0.0e+00 1657.1 1233 70.6
Solyc04g071990.3 Solanum lycopersicum HOM05D003952 ORTHO05D005083 0.0e+00 1656.3 1230 71.1
Sopen04g027970 Solanum pennellii HOM05D003952 ORTHO05D005083 0.0e+00 1655.6 1230 71.0
CANSAT25G0323 Cannabis sativa HOM05D003952 ORTHO05D005083 0.0e+00 1652.9 1230 71.5
MBI04_g08946_MAGBIO Magnolia biondii HOM05D003952 ORTHO05D005083 0.0e+00 1649.4 1233 69.9
CsaV3_6G005020 Cucumis sativus L. HOM05D003952 ORTHO05D005083 0.0e+00 1648.3 1232 70.0
MELO3C030034.2 Cucumis melo HOM05D003952 ORTHO05D005083 0.0e+00 1647.5 1232 70.0
MELO3C024067.2 Cucumis melo HOM05D003952 ORTHO05D005083 0.0e+00 1646.3 1236 70.1
Oeu051283.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 1645.2 1230 70.5
Phvul.004G088300 Phaseolus vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1641.7 1236 70.3
CsaV3_7G024490 Cucumis sativus L. HOM05D003952 ORTHO05D005083 0.0e+00 1640.2 1232 70.0
Glyma.16G163200 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1636.3 1235 70.0
Migut.N02951 Erythranthe guttata HOM05D003952 ORTHO05D005083 0.0e+00 1635.9 1232 70.3
Sed0012183 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1635.2 1230 69.7
CAN.G495.15 Capsicum annuum HOM05D003952 ORTHO05D005083 0.0e+00 1634.8 1230 70.6
Oeu002069.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 1633.2 1231 70.1
THA.LOC104810466 Tarenaya hassleriana HOM05D003952 ORTHO05D005083 0.0e+00 1633.2 1230 69.9
Aqoxy6G00415 Aquilegia oxysepala HOM05D003952 ORTHO05D005083 0.0e+00 1632.5 1237 70.5
Sed0019934 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1632.5 1232 69.2
ClCG08G007370 Citrullus lanatus HOM05D003952 ORTHO05D005083 0.0e+00 1629.0 1232 69.7
Nitab4.5_0000099g0200 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1627.5 1262 69.7
Aa31LG7G6730 Aethionema arabicum HOM05D003952 ORTHO05D005083 0.0e+00 1626.3 1231 69.5
Carub.0001s2228 Capsella rubella HOM05D003952 ORTHO05D005083 0.0e+00 1625.1 1232 69.3
AT1G22770 Arabidopsis thaliana HOM05D003952 ORTHO05D005083 0.0e+00 1622.4 1229 69.2
Ciclev10004044m.g Citrus clementina HOM05D003952 ORTHO05D005083 0.0e+00 1619.8 1108 75.3
AL1G36320 Arabidopsis lyrata HOM05D003952 ORTHO05D005083 0.0e+00 1619.4 1231 69.2
Thhalv10006603m.g Eutrema salsugineum HOM05D003952 ORTHO05D005083 0.0e+00 1619.4 1235 69.2
CAN.G26.47 Capsicum annuum HOM05D003952 ORTHO05D005083 0.0e+00 1619.0 1239 69.7
Sp1g20280 Schrenkiella parvula HOM05D003952 ORTHO05D005083 0.0e+00 1615.9 1237 68.6
Nitab4.5_0000872g0040 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1615.5 1231 70.7
Solyc12g056650.2 Solanum lycopersicum HOM05D003952 ORTHO05D005083 0.0e+00 1607.8 1239 69.2
Sopen12g029310 Solanum pennellii HOM05D003952 ORTHO05D005083 0.0e+00 1607.0 1239 69.2
CARHR023130 Cardamine hirsuta HOM05D003952 ORTHO05D005083 0.0e+00 1605.9 1235 68.7
ECA246G0004 Erigeron canadensis HOM05D003952 ORTHO05D005083 0.0e+00 1604.7 1240 69.0
Ca_10663_v3 Cicer arietinum L. HOM05D003952 ORTHO05D005083 0.0e+00 1602.4 1299 67.3
Nitab4.5_0004270g0010 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1601.3 1253 69.2
TPR.G17028 Trifolium pratense HOM05D003952 ORTHO05D005083 0.0e+00 1598.2 1232 68.7
SGA_v2.0_scaffold133G34641 Striga asiatica HOM05D003952 ORTHO05D005083 0.0e+00 1597.8 1237 69.4
PSO170G5657 Papaver somniferum HOM05D003952 ORTHO05D005083 0.0e+00 1596.6 1236 68.3
Migut.C00380 Erythranthe guttata HOM05D003952 ORTHO05D005083 0.0e+00 1592.0 1232 69.2
Lj7A383T43 Lonicera japonica HOM05D003952 ORTHO05D005083 0.0e+00 1592.0 1245 68.8
HanXRQChr11g0320211 Helianthus annuus HOM05D003952 ORTHO05D005083 0.0e+00 1589.3 1237 69.4
Nitab4.5_0005673g0010 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1585.9 1230 69.3
ClCG09G010210 Citrullus lanatus HOM05D003952 ORTHO05D005083 0.0e+00 1580.1 1156 71.5
A09p41970 Brassica napus HOM05D003952 ORTHO05D005083 0.0e+00 1575.1 1241 67.7
C05p21880 Brassica napus HOM05D003952 ORTHO05D005083 0.0e+00 1569.3 1241 67.4
Lsat_1_v5_gn_6_101520 Lactuca sativa HOM05D003952 ORTHO05D005083 0.0e+00 1562.7 1239 67.8
Zm00001eb122110 Zea mays HOM05D003952 ORTHO05D005083 0.0e+00 1560.0 1235 66.6
Zm00001eb337600 Zea mays HOM05D003952 ORTHO05D005083 0.0e+00 1557.7 1240 66.4
Os01g0182600 Oryza sativa ssp. japonica HOM05D003952 ORTHO05D005083 0.0e+00 1557.3 1240 66.1
Psat6g190640 Pisum sativum HOM05D003952 ORTHO05D005083 0.0e+00 1550.8 1144 72.0
Manes.18G095000 Manihot esculenta HOM05D003952 ORTHO05D005083 0.0e+00 1547.7 1080 75.5
Peaxi162Scf00160g01744 Petunia axillaris HOM05D003952 ORTHO05D005083 0.0e+00 1546.9 1216 68.7
ATR1120G094 Amborella trichopoda HOM05D003952 ORTHO05D005083 0.0e+00 1546.6 1154 70.2
Lsat_1_v5_gn_9_42181 Lactuca sativa HOM05D003952 ORTHO05D005083 0.0e+00 1542.7 1249 66.5
HPP92_008686 Vanilla planifolia HOM05D003952 ORTHO05D005083 0.0e+00 1487.2 1230 64.4
HPP92_008674 Vanilla planifolia HOM05D003952 ORTHO05D005083 0.0e+00 1479.9 1230 64.1
Dinv25899 Davidia involucrata HOM05D003952 ORTHO05D005083 0.0e+00 1421.8 1006 73.5
unitig_747.g21544 Utricularia gibba HOM05D003952 ORTHO05D005083 0.0e+00 1416.4 1240 62.8
CiPaw.16G008300 Carya illinoinensis HOM05D003952 ORTHO05D005083 0.0e+00 1363.6 1016 70.6
COL.COLO4_13783 Corchorus olitorius HOM05D003952 ORTHO05D005083 0.0e+00 1359.0 1043 70.2
Sed0012813 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1284.6 1010 68.2
Lj4C703T11 Lonicera japonica HOM05D003952 ORTHO05D005083 0.0e+00 1265.0 967 70.0
Lalb_Chr01g0009771 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1256.5 1031 65.8
PGSC0003DMG400018791 Solanum tuberosum HOM05D003952 ORTHO05D005083 0.0e+00 1219.9 899 71.9
unitig_32.g11167 Utricularia gibba HOM05D003952 ORTHO05D005083 0.0e+00 1199.5 1232 55.7
CSS0023419 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1181.4 1042 63.4
TAR381G0458 Trochodendron aralioides HOM05D003952 ORTHO05D005083 0.0e+00 1179.9 821 74.8
Actinidia29549 Actinidia chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1148.7 1029 62.4
BcaNung06971 Brassica carinata HOM05D003952 ORTHO05D005083 0.0e+00 1125.5 865 69.1
Oeu022058.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 1114.4 821 72.1
VMungo0464G1608 Vigna mungo HOM05D003952 ORTHO05D005083 0.0e+00 1095.9 819 71.1
SalBow6G3936 Salvia bowleyana HOM05D003952 ORTHO05D005083 1.5e-295 1020.0 1230 51.1
Hma1.2p1_0678F.1_g202015 Hydrangea macrophylla HOM05D003952 ORTHO05D005083 1.5e-290 1003.4 734 72.1
SMO367G0140 Selaginella moellendorffii HOM05D003952 ORTHO05D005083 3.7e-281 972.2 1161 47.2
Mapoly0019s0145 Marchantia polymorpha HOM05D003952 ORTHO05D005083 3.0e-275 952.6 1262 44.1
GSVIVG01001406001 Vitis vinifera HOM05D003952 ORTHO05D005083 4.1e-264 915.6 589 79.1
CDE04G2370 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 1.2e-252 877.5 724 65.3
Cpa.g.sc26.82 Carica papaya HOM05D003952 ORTHO05D005083 3.0e-235 819.7 612 71.1
CDE04G1363 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 1.7e-177 627.9 483 68.1
VMungo0464G1293 Vigna mungo HOM05D003952 ORTHO05D005083 3.4e-154 550.4 411 69.6
Actinidia04747 Actinidia chinensis HOM05D003952 ORTHO05D005083 4.7e-135 486.9 962 37.6
TAR381G1674 Trochodendron aralioides HOM05D003952 ORTHO05D005083 4.5e-130 470.3 358 67.9
BraA09t39685Z Brassica rapa HOM05D003952 ORTHO05D005083 2.4e-123 448.0 358 64.8
BolC5t30883H Brassica oleracea HOM05D003952 ORTHO05D005083 3.5e-122 444.1 357 63.9
GSVIVG01001405001 Vitis vinifera HOM05D003952 ORTHO05D005083 2.2e-121 441.4 285 79.6
AagrBONN_evm.TU.Sc2ySwM_117.1660 Anthoceros agrestis HOM05D003952 ORTHO05D005083 2.5e-120 438.0 810 35.4
Psat7g241120 Pisum sativum HOM05D002716 ORTHO05D003324 6.1e-111 406.8 663 42.1
CBR_g22347 Chara braunii HOM05D003952 ORTHO05D005083 1.2e-109 402.5 1295 29.7
CDE04G3041 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 9.9e-85 319.7 520 42.1
Cpa.g.sc26.81 Carica papaya HOM05D003952 ORTHO05D005083 1.9e-83 315.5 279 59.5
Lj4A703G54 Lonicera japonica HOM05D003952 ORTHO05D005083 1.4e-78 299.3 217 69.6
HanXRQChr10g0278641 Helianthus annuus HOM05D003952 ORTHO05D005083 3.4e-77 294.7 205 73.7
Lsat_1_v5_gn_2_63220 Lactuca sativa HOM05D003952 ORTHO05D005083 1.1e-75 289.7 290 61.0
COL.COLO4_13782 Corchorus olitorius HOM05D003952 ORTHO05D005083 1.9e-72 278.9 184 76.1
CAN.G1225.1 Capsicum annuum HOM05D003952 ORTHO05D008201 5.8e-69 267.3 182 71.4
Sopen10g022170 Solanum pennellii HOM05D003952 ORTHO05D011221 3.8e-68 264.6 144 88.2
Lsat_1_v5_gn_5_129380 Lactuca sativa HOM05D003952 ORTHO05D015589 4.3e-64 251.1 185 69.7
Lsat_1_v5_gn_8_75660 Lactuca sativa HOM05D003952 ORTHO05D005083 5.6e-64 250.8 265 60.8
Lalb_Chr01g0009781 Lupinus albus HOM05D003952 ORTHO05D005083 1.5e-61 242.7 186 68.3
Lsat_1_v5_gn_3_78320 Lactuca sativa HOM05D003952 ORTHO05D005083 1.6e-50 206.1 133 78.9
CANSAT25G0696 Cannabis sativa HOM05D003952 ORTHO05D005083 4.3e-48 198.0 118 85.6
Psat5g166880 Pisum sativum HOM05D003952 ORTHO05D005083 4.3e-48 198.0 147 67.3
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 2.4e-46 192.2 139 69.8
Duzib041G0651 Durio zibethinus HOM05D003952 ORTHO05D005083 7.7e-37 160.6 92 89.1
Psat0s4455g0040 Pisum sativum HOM05D003952 ORTHO05D037363 1.4e-30 139.8 86 79.1
Psat7g010640 Pisum sativum HOM05D003952 ORTHO05D037363 1.4e-30 139.8 91 73.6
Psat7g010720 Pisum sativum HOM05D003952 ORTHO05D037363 1.4e-30 139.8 91 73.6
Psat0s2845g0120 Pisum sativum HOM05D004054 ORTHO05D004945 8.5e-20 104.0 78 65.4
Nn3g20398 Nelumbo nucifera HOM05D003952 ORTHO05D005083 1.4e-19 103.2 81 69.1
PGSC0003DMG400001110 Solanum tuberosum HOM05D003952 ORTHO05D005083 1.3e-15 90.1 81 54.3
Lsat_1_v5_gn_3_73081 Lactuca sativa HOM05D003952 ORTHO05D015589 2.2e-15 89.4 53 67.9
Lsat_1_v5_gn_7_62680 Lactuca sativa HOM05D003952 ORTHO05D015589 2.8e-15 89.0 94 47.9
TPR.G25241 Trifolium pratense HOM05D003952 ORTHO05D048898 1.1e-14 87.0 59 74.6
Lsat_1_v5_gn_5_15721 Lactuca sativa HOM05D001610 ORTHO05D001585 1.0e-09 70.5 147 44.2


User provided reference genes

Program Settings