Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62034891 Chenopodium quinoa HOM05D005921 ORTHO05D007374 5.9e-244 847.0 411 100.0
EL10Ac1g01606 Beta vulgaris HOM05D005921 ORTHO05D007374 4.0e-200 701.4 450 76.2
AUR62026635 Chenopodium quinoa HOM05D005921 ORTHO05D007374 9.6e-186 653.7 323 95.7
Ah.05g168190 Amaranthus hybridus HOM05D005921 ORTHO05D007374 1.2e-172 610.1 447 69.4
Hund26678 Selenicereus undatus HOM05D005921 ORTHO05D007374 3.3e-170 602.1 476 63.9
Sc02g0003820 Simmondsia chinensis HOM05D005921 ORTHO05D007374 3.7e-169 598.6 415 69.9
GSVIVG01001409001 Vitis vinifera HOM05D005921 ORTHO05D007374 1.3e-163 580.1 413 67.3
Thecc.08G159700 Theobroma cacao HOM05D005921 ORTHO05D007374 1.4e-160 570.1 400 66.8
arahy.Tifrunner.gnm1.ann1.9JVG50 Arachis hypogaea HOM05D005921 ORTHO05D007374 6.9e-160 567.8 414 64.7
arahy.Tifrunner.gnm1.ann1.TV90AE Arachis hypogaea HOM05D005921 ORTHO05D007374 6.9e-160 567.8 414 64.7
Gohir.D05G273101 Gossypium hirsutum HOM05D005921 ORTHO05D007374 9.0e-160 567.4 380 69.7
Lj5g0014499 Lotus japonicus HOM05D005921 ORTHO05D007374 2.0e-159 566.2 414 65.2
Cfa018279 Carpinus fangiana HOM05D005921 ORTHO05D007374 3.4e-159 565.5 414 65.0
Glyma.20G170200 Glycine max HOM05D005921 ORTHO05D007374 2.2e-158 562.8 413 64.2
Glyma.10G221400 Glycine max HOM05D005921 ORTHO05D007374 5.0e-158 561.6 415 64.3
Lalb_Chr02g0141581 Lupinus albus HOM05D005921 ORTHO05D007374 6.5e-158 561.2 411 64.7
Atru.chr13.2001 Acer truncatum HOM05D005921 ORTHO05D007374 8.4e-158 560.8 414 65.2
Medtr1g097955 Medicago truncatula HOM05D005921 ORTHO05D007374 8.4e-158 560.8 412 64.1
Psat0s899g0040 Pisum sativum HOM05D005921 ORTHO05D007374 8.4e-158 560.8 414 64.7
Lalb_Chr06g0161731 Lupinus albus HOM05D005921 ORTHO05D007374 1.9e-157 559.7 411 64.2
MD05G1033700 Malus domestica HOM05D005921 ORTHO05D007374 2.5e-157 559.3 430 64.2
Potri.005G197000 Populus trichocarpa HOM05D005921 ORTHO05D007374 3.2e-157 558.9 398 66.6
TPR.G17011 Trifolium pratense HOM05D005921 ORTHO05D007374 7.9e-156 554.3 416 65.1
Ca_10662_v3 Cicer arietinum L. HOM05D005921 ORTHO05D007374 1.3e-155 553.5 412 63.3
Rhsim11G0087800 Rhododendron simsii HOM05D005921 ORTHO05D007374 1.3e-155 553.5 452 61.3
Eucgr.F04188 Eucalyptus grandis HOM05D005921 ORTHO05D007374 1.8e-155 553.1 386 66.6
CiPaw.15G012300 Carya illinoinensis HOM05D005921 ORTHO05D007374 3.0e-155 552.4 379 68.3
Duzib116G0900 Durio zibethinus HOM05D005921 ORTHO05D007374 8.7e-155 550.8 393 65.9
Ciclev10003457m.g Citrus clementina HOM05D005921 ORTHO05D007374 1.9e-154 549.7 401 66.3
Prupe.8G040700 Prunus persica HOM05D005921 ORTHO05D007374 2.5e-154 549.3 429 62.9
Gorai.009G286300 Gossypium raimondii HOM05D005921 ORTHO05D007374 3.3e-154 548.9 415 63.9
vmacro01494 Vaccinium macrocarpon HOM05D005921 ORTHO05D007374 3.3e-154 548.9 429 62.9
RcHm_v2.0_Chr6g0274201 Rosa chinensis HOM05D005921 ORTHO05D007374 4.3e-154 548.5 394 66.0
Sp5g26720 Schrenkiella parvula HOM05D005921 ORTHO05D007374 5.7e-154 548.1 389 65.8
Gohir.A05G270866 Gossypium hirsutum HOM05D005921 ORTHO05D007374 7.4e-154 547.7 415 63.6
AL2G31250 Arabidopsis lyrata HOM05D005921 ORTHO05D007374 2.2e-153 546.2 389 65.3
TAR381G0629 Trochodendron aralioides HOM05D005921 ORTHO05D007374 2.8e-153 545.8 457 60.0
Manes.02G183400 Manihot esculenta HOM05D005921 ORTHO05D007374 3.7e-153 545.4 397 65.5
COL.COLO4_13778 Corchorus olitorius HOM05D005921 ORTHO05D007374 1.1e-152 543.9 483 56.7
Migut.N02950 Erythranthe guttata HOM05D005921 ORTHO05D007374 1.4e-152 543.5 458 59.4
Hma1.2p1_0358F.1_g134840 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 1.4e-152 543.5 453 58.5
CAN.G1252.3 Capsicum annuum HOM05D005921 ORTHO05D007374 1.8e-152 543.1 403 65.3
TWI32G1095 Tripterygium wilfordii HOM05D005921 ORTHO05D007374 6.9e-152 541.2 453 60.5
MBI01_g34168_MAGBIO Magnolia biondii HOM05D005921 ORTHO05D007374 9.0e-152 540.8 411 61.8
Aa31LG4G8950 Aethionema arabicum HOM05D005921 ORTHO05D007374 1.2e-151 540.4 389 64.0
VMungo0720G0456 Vigna mungo HOM05D005921 ORTHO05D007374 2.0e-151 539.7 414 62.3
AT1G71696 Arabidopsis thaliana HOM05D005921 ORTHO05D007374 2.6e-151 539.3 389 65.0
CsaV3_6G004990 Cucumis sativus L. HOM05D005921 ORTHO05D007374 4.5e-151 538.5 404 63.4
PGR044G0568 Punica granatum HOM05D005921 ORTHO05D007374 4.5e-151 538.5 414 61.8
CANSAT25G0895 Cannabis sativa HOM05D005921 ORTHO05D007374 1.0e-150 537.3 448 58.5
Carub.0002s1845 Capsella rubella HOM05D005921 ORTHO05D007374 1.7e-150 536.6 392 63.3
Cc10_g15280 Coffea canephora HOM05D005921 ORTHO05D007374 5.0e-150 535.0 399 63.4
BcaB05g24658 Brassica carinata HOM05D005921 ORTHO05D007374 8.5e-150 534.3 389 64.0
Solyc04g072010.3 Solanum lycopersicum HOM05D005921 ORTHO05D007374 8.5e-150 534.3 403 63.5
Sopen04g027990 Solanum pennellii HOM05D005921 ORTHO05D007374 8.5e-150 534.3 403 63.5
Eucgr.L02800 Eucalyptus grandis HOM05D005921 ORTHO05D007374 2.5e-149 532.7 436 59.4
A02p17260 Brassica napus HOM05D005921 ORTHO05D007374 4.2e-149 531.9 389 64.3
CSS0006668 Camellia sinensis var. sinensis HOM05D005921 ORTHO05D007374 4.2e-149 531.9 403 62.8
ClCG08G007340 Citrullus lanatus HOM05D005921 ORTHO05D007374 5.5e-149 531.6 437 59.7
BcaC03g15284 Brassica carinata HOM05D005921 ORTHO05D007374 2.7e-148 529.3 389 64.0
Thhalv10018610m.g Eutrema salsugineum HOM05D005921 ORTHO05D007374 6.7e-147 524.6 370 66.5
HanXRQChr02g0042431 Helianthus annuus HOM05D005921 ORTHO05D007374 1.5e-146 523.5 425 59.8
C02p28900 Brassica napus HOM05D005921 ORTHO05D007374 7.4e-146 521.2 405 61.7
Peaxi162Scf00360g00056 Petunia axillaris HOM05D005921 ORTHO05D007374 7.4e-146 521.2 406 62.3
FAN24G0054 Fragaria x ananassa HOM05D005921 ORTHO05D007374 9.7e-146 520.8 376 65.2
FvH4_2g13020 Fragaria vesca HOM05D005921 ORTHO05D007374 1.8e-144 516.5 376 64.9
PSO675G2388 Papaver somniferum HOM05D005921 ORTHO05D007374 3.1e-144 515.8 438 59.4
Aqoxy6G00427 Aquilegia oxysepala HOM05D005921 ORTHO05D007374 2.0e-143 513.1 412 59.0
Sabra05G0149900 Salix brachista HOM05D005921 ORTHO05D007374 5.9e-143 511.5 357 66.4
Sed0007537 Sechium edule HOM05D005921 ORTHO05D007374 1.0e-142 510.8 418 59.8
CDE04G2034 Ceratophyllum demersum HOM05D005921 ORTHO05D007374 1.3e-142 510.4 413 59.6
SGA_v2.0_scaffold54G19682 Striga asiatica HOM05D005921 ORTHO05D007374 5.0e-142 508.4 394 62.2
MSTRG.22109 Avicennia marina HOM05D005921 ORTHO05D007374 4.2e-141 505.4 419 58.9
FAN27G2380 Fragaria x ananassa HOM05D005921 ORTHO05D007374 4.7e-140 501.9 397 61.2
MSTRG.24492 Avicennia marina HOM05D005921 ORTHO05D007374 7.9e-140 501.1 423 57.9
Phvul.007G083600 Phaseolus vulgaris HOM05D005921 ORTHO05D007374 1.8e-139 500.0 369 62.9
unitig_578.g16229 Utricularia gibba HOM05D005921 ORTHO05D007374 3.0e-139 499.2 396 59.6
CARHR291100 Cardamine hirsuta HOM05D005921 ORTHO05D007374 3.9e-139 498.8 355 66.2
Lsat_1_v5_gn_1_5181 Lactuca sativa HOM05D005921 ORTHO05D007374 1.5e-138 496.9 425 57.2
SalBow6G1744 Salvia bowleyana HOM05D005921 ORTHO05D007374 3.3e-138 495.7 432 57.9
Zm00001eb377250 Zea mays HOM05D005921 ORTHO05D007374 2.8e-137 492.7 416 57.0
ATR1120G060 Amborella trichopoda HOM05D004165 ORTHO05D005063 5.3e-136 488.4 408 57.6
ECA247G3881 Erigeron canadensis HOM05D005921 ORTHO05D007374 1.9e-133 479.9 381 61.7
FAN15G3525 Fragaria x ananassa HOM05D005921 ORTHO05D007374 1.6e-132 476.9 400 58.5
MELO3C019977.2 Cucumis melo HOM05D005921 ORTHO05D007374 3.0e-131 472.6 337 65.3
Nn5g28835 Nelumbo nucifera HOM05D005921 ORTHO05D007374 1.1e-130 470.7 458 53.9
Lj4A704G63 Lonicera japonica HOM05D005921 ORTHO05D007374 7.4e-130 468.0 365 63.0
Lj7A383T42 Lonicera japonica HOM05D005921 ORTHO05D007374 1.3e-129 467.2 406 58.9
FAN20G2564 Fragaria x ananassa HOM05D005921 ORTHO05D007374 8.0e-124 448.0 389 57.8
DCAR_001188 Daucus carota HOM05D005921 ORTHO05D007374 6.5e-118 428.3 300 68.0
SMO116G0063 Selaginella moellendorffii HOM05D005921 ORTHO05D007374 1.0e-115 421.0 357 57.4
Nitab4.5_0013157g0020 Nicotiana tabacum HOM05D005921 ORTHO05D007374 4.0e-115 419.1 360 58.9
Hma1.2p1_0358F.1_g134830 Hydrangea macrophylla HOM05D005921 ORTHO05D007374 1.3e-113 414.1 340 60.0
Mapoly0096s0032 Marchantia polymorpha HOM05D005921 ORTHO05D007374 6.6e-110 401.7 375 52.3
Nitab4.5_0000099g0240 Nicotiana tabacum HOM05D005921 ORTHO05D007374 3.3e-109 399.4 488 46.5
AagrBONN_evm.TU.Sc2ySwM_344.3190 Anthoceros agrestis HOM05D005921 ORTHO05D007374 7.5e-106 388.3 384 49.5
Ciclev10003529m.g Citrus clementina HOM05D005921 ORTHO05D007374 3.7e-105 386.0 376 55.6
HPP92_000681 Vanilla planifolia HOM05D005921 ORTHO05D007374 7.3e-101 371.7 351 55.6
Pp3c16_14030 Physcomitrium patens HOM05D005921 ORTHO05D007374 1.2e-100 370.9 365 49.9
Cpa.g.sc26.80 Carica papaya HOM05D005921 ORTHO05D007374 5.8e-98 362.1 293 59.4
CBR_g30849 Chara braunii HOM05D005921 ORTHO05D007374 2.4e-96 356.7 313 50.8
Haze_17806 Corylus avellana HOM05D005921 ORTHO05D007374 1.2e-84 317.8 268 59.0
QL02p037446 Quercus lobata HOM05D005921 ORTHO05D007374 6.2e-84 315.5 213 67.1
QL02p037946 Quercus lobata HOM05D005921 ORTHO05D007374 6.2e-84 315.5 213 67.1
Pp3c6_12100 Physcomitrium patens HOM05D005921 ORTHO05D007374 1.4e-72 277.7 380 40.3
SHI09099 Sapria himalayana HOM05D005921 ORTHO05D007374 3.9e-70 269.6 197 65.5
HPP92_000638 Vanilla planifolia HOM05D005921 ORTHO05D007374 5.1e-70 269.2 268 50.7
QL02p037958 Quercus lobata HOM05D005921 ORTHO05D007374 1.7e-65 254.2 243 54.3
QL02p037460 Quercus lobata HOM05D005921 ORTHO05D007374 8.4e-65 251.9 243 53.9
MCO15G195 Micromonas commoda HOM05D005921 ORTHO05D007374 9.3e-64 248.4 405 35.6
BraA02t06773Z Brassica rapa HOM05D005921 ORTHO05D007374 1.6e-63 247.7 176 67.0
BolC2t08936H Brassica oleracea HOM05D005921 ORTHO05D007374 2.1e-63 247.3 183 65.0
BolC2t08937H Brassica oleracea HOM05D005921 ORTHO05D007374 1.3e-62 244.6 197 58.4
BraA02t06774Z Brassica rapa HOM05D005921 ORTHO05D007374 3.0e-62 243.4 197 57.9
Oeu017621.1 Olea europaea HOM05D005921 ORTHO05D007374 8.7e-62 241.9 179 64.2
PRCOL_00005633 Prasinoderma coloniale HOM05D005921 ORTHO05D007374 1.4e-59 234.6 326 38.3
Zm00001eb035610 Zea mays HOM05D005921 ORTHO05D007374 5.3e-59 232.6 150 72.7
Os06g0144600 Oryza sativa ssp. japonica HOM05D005921 ORTHO05D007374 4.9e-57 226.1 157 68.8
SEGI_33860 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 2.3e-38 164.1 149 53.7
SEGI_16149 Sequoiadendron giganteum HOM05D005921 ORTHO05D007374 7.4e-37 159.1 99 68.7
Cre07.g335900 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 4.6e-31 139.8 312 30.8
SHI09097 Sapria himalayana HOM05D005921 ORTHO05D007374 2.5e-29 134.0 74 75.7
Duzib093G1718 Durio zibethinus HOM05D005921 ORTHO05D007374 4.8e-28 129.8 73 75.3
Zm00001eb246880 Zea mays HOM05D005921 ORTHO05D007374 7.9e-23 112.5 108 52.8
Pp3c27_7150 Physcomitrium patens HOM05D005921 ORTHO05D007374 1.0e-22 112.1 329 28.6
MD10G1034600 Malus domestica HOM05D005921 ORTHO05D007374 1.7e-20 104.8 95 53.7
Zm00001eb035620 Zea mays HOM05D005921 ORTHO05D007374 2.2e-20 104.4 55 78.2
Cre06.g309450 Chlamydomonas reinhardtii HOM05D005921 ORTHO05D007374 1.7e-17 94.7 374 25.4
Sabra02G0051300 Salix brachista HOM05D005921 ORTHO05D007374 1.6e-10 71.6 88 42.0


User provided reference genes

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