Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62034829 Chenopodium quinoa HOM05D005804 ORTHO05D006849 2.5e-164 582.0 293 100.0
AUR62034830 Chenopodium quinoa HOM05D005804 ORTHO05D006849 3.6e-163 578.2 291 100.0
AUR62029607 Chenopodium quinoa HOM05D005804 ORTHO05D006849 3.1e-114 415.6 229 89.1
EL10Ac5g11407 Beta vulgaris HOM05D005804 ORTHO05D006849 6.4e-75 285.0 233 67.0
Hund02443 Selenicereus undatus HOM05D005804 ORTHO05D006849 5.8e-68 261.9 265 55.8
Ah.02g114880 Amaranthus hybridus HOM05D005804 ORTHO05D006849 1.7e-67 260.4 225 61.3
Sc22g0003840 Simmondsia chinensis HOM05D005804 ORTHO05D006849 1.6e-57 227.3 216 55.6
GSVIVG01008547001 Vitis vinifera HOM05D005804 ORTHO05D006849 1.1e-50 204.5 232 50.9
Hma1.2p1_0014F.1_g009390 Hydrangea macrophylla HOM05D005804 ORTHO05D006849 2.4e-45 186.8 200 49.0
Rhsim12G0175100 Rhododendron simsii HOM05D005804 ORTHO05D006849 6.9e-45 185.3 210 47.1
Ciclev10031832m.g Citrus clementina HOM05D005804 ORTHO05D006849 4.5e-44 182.6 223 45.7
TAR629G0711 Trochodendron aralioides HOM05D005804 ORTHO05D006849 7.6e-44 181.8 199 48.7
CSS0001147 Camellia sinensis var. sinensis HOM05D005804 ORTHO05D006849 9.9e-44 181.4 226 44.2
Actinidia08874 Actinidia chinensis HOM05D005804 ORTHO05D006849 1.3e-43 181.0 200 50.0
HanXRQChr13g0408711 Helianthus annuus HOM05D005804 ORTHO05D006849 2.2e-43 180.3 200 47.0
QL10p002869 Quercus lobata HOM05D005804 ORTHO05D006849 2.9e-43 179.9 201 48.8
Lsat_1_v5_gn_1_33221 Lactuca sativa HOM05D005804 ORTHO05D006849 4.9e-43 179.1 187 47.6
MD14G1156600 Malus domestica HOM05D005804 ORTHO05D006849 7.1e-42 175.3 239 44.8
Dinv23150 Davidia involucrata HOM05D005804 ORTHO05D006849 1.2e-41 174.5 192 49.5
RcHm_v2.0_Chr7g0190091 Rosa chinensis HOM05D005804 ORTHO05D006849 1.6e-41 174.1 202 48.0
CANSAT80G2783 Cannabis sativa HOM05D005804 ORTHO05D006849 2.1e-41 173.7 213 43.2
MD06G1141400 Malus domestica HOM05D005804 ORTHO05D006849 3.5e-41 172.9 207 46.9
Haze_07141 Corylus avellana HOM05D005804 ORTHO05D006849 7.9e-41 171.8 232 43.1
Cfa018793 Carpinus fangiana HOM05D005804 ORTHO05D006849 1.0e-40 171.4 203 45.3
FAN13G2030 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.0e-40 171.4 196 48.5
CsaV3_1G009670 Cucumis sativus L. HOM05D005804 ORTHO05D006849 1.8e-40 170.6 211 46.0
FAN08G1998 Fragaria x ananassa HOM05D005804 ORTHO05D006849 3.9e-40 169.5 234 44.0
Manes.14G051101 Manihot esculenta HOM05D005804 ORTHO05D006849 3.9e-40 169.5 210 42.9
Thecc.03G129500 Theobroma cacao HOM05D005804 ORTHO05D006849 1.9e-39 167.2 204 42.6
Aqoxy5G03360 Aquilegia oxysepala HOM05D005804 ORTHO05D006849 3.3e-39 166.4 232 40.9
Prupe.5G150700 Prunus persica HOM05D005804 ORTHO05D006849 3.3e-39 166.4 246 43.1
FvH4_5g08360 Fragaria vesca HOM05D005804 ORTHO05D006849 4.3e-39 166.0 196 47.4
Sopen03g029080 Solanum pennellii HOM05D005804 ORTHO05D006849 7.4e-39 165.2 198 42.9
THA.LOC104825017 Tarenaya hassleriana HOM05D005804 ORTHO05D006849 9.6e-39 164.9 211 42.2
CAN.G1631.5 Capsicum annuum HOM05D005606 ORTHO05D006446 1.3e-38 164.5 186 46.8
ClCG03G003790 Citrullus lanatus HOM05D005804 ORTHO05D006849 1.3e-38 164.5 196 45.9
DCAR_007491 Daucus carota HOM05D005804 ORTHO05D006849 1.3e-38 164.5 211 44.1
Nitab4.5_0010950g0010 Nicotiana tabacum HOM05D005804 ORTHO05D006849 2.1e-38 163.7 191 44.5
Oeu058729.2 Olea europaea HOM05D005804 ORTHO05D006849 2.1e-38 163.7 193 44.0
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 2.8e-38 163.3 196 46.9
Potri.012G098000 Populus trichocarpa HOM05D005804 ORTHO05D006849 6.2e-38 162.2 244 38.5
Duzib205G0351 Durio zibethinus HOM05D005804 ORTHO05D006849 8.1e-38 161.8 204 41.7
Solyc03g098330.2 Solanum lycopersicum HOM05D005804 ORTHO05D006849 8.1e-38 161.8 189 43.9
Migut.O00254 Erythranthe guttata HOM05D005804 ORTHO05D006849 1.1e-37 161.4 199 41.7
Lalb_Chr11g0069551 Lupinus albus HOM05D005804 ORTHO05D006849 1.1e-37 161.4 194 44.3
Peaxi162Scf00171g00421 Petunia axillaris HOM05D005804 ORTHO05D006849 1.1e-37 161.4 186 46.2
FAN04G2797 Fragaria x ananassa HOM05D005804 ORTHO05D006849 1.8e-37 160.6 233 42.9
Gorai.001G058800 Gossypium raimondii HOM05D005804 ORTHO05D006849 1.8e-37 160.6 202 42.1
PGSC0003DMG400025629 Solanum tuberosum HOM05D005804 ORTHO05D006849 1.8e-37 160.6 189 43.9
COL.COLO4_28132 Corchorus olitorius HOM05D005804 ORTHO05D006849 3.1e-37 159.8 203 41.4
Atru.chr12.1219 Acer truncatum HOM05D005804 ORTHO05D006849 1.2e-36 157.9 234 39.3
Cpa.g.sc13.112 Carica papaya HOM05D005804 ORTHO05D006849 2.6e-36 156.8 202 43.6
CiPaw.11G006800 Carya illinoinensis HOM05D005804 ORTHO05D006849 2.6e-36 156.8 213 43.7
SalBow8G2935 Salvia bowleyana HOM05D005804 ORTHO05D006849 2.6e-36 156.8 204 43.1
Sp7g22880 Schrenkiella parvula HOM05D005804 ORTHO05D006849 2.6e-36 156.8 206 40.8
Cc04_g08810 Coffea canephora HOM05D005804 ORTHO05D006849 4.5e-36 156.0 195 44.6
arahy.Tifrunner.gnm1.ann1.489AYV Arachis hypogaea HOM05D005804 ORTHO05D006849 7.6e-36 155.2 209 41.6
arahy.Tifrunner.gnm1.ann1.Y2QIS7 Arachis hypogaea HOM05D005804 ORTHO05D006849 1.0e-35 154.8 209 41.6
Atru.chr6.1796 Acer truncatum HOM05D005804 ORTHO05D006849 1.3e-35 154.5 188 43.6
BraA01t01555Z Brassica rapa HOM05D005804 ORTHO05D006849 1.3e-35 154.5 189 42.3
AT4G24900 Arabidopsis thaliana HOM05D005804 ORTHO05D006849 1.7e-35 154.1 200 43.0
BcaNung06008 Brassica carinata HOM05D005804 ORTHO05D006849 1.7e-35 154.1 189 42.9
TWI23G1188 Tripterygium wilfordii HOM05D005804 ORTHO05D006849 1.7e-35 154.1 227 41.0
C01p20180 Brassica napus HOM05D005804 ORTHO05D006849 2.9e-35 153.3 189 43.4
SGA_v2.0_scaffold164G38120 Striga asiatica HOM05D005804 ORTHO05D006849 3.8e-35 152.9 197 43.7
A01p16190 Brassica napus HOM05D005804 ORTHO05D006849 4.9e-35 152.5 189 41.8
Aa31LG7G10880 Aethionema arabicum HOM05D005804 ORTHO05D006849 6.5e-35 152.1 211 38.9
BcaC09g52237 Brassica carinata HOM05D005804 ORTHO05D006849 6.5e-35 152.1 189 42.9
BolC1t01947H Brassica oleracea HOM05D005804 ORTHO05D006849 6.5e-35 152.1 189 42.9
AL7G28300 Arabidopsis lyrata HOM05D005804 ORTHO05D006849 8.4e-35 151.8 190 44.7
PSO478G1623 Papaver somniferum HOM05D005804 ORTHO05D006849 1.1e-34 151.4 200 42.5
MBI11_g05331_MAGBIO Magnolia biondii HOM05D005804 ORTHO05D006849 4.2e-34 149.4 211 42.2
TAR371G0929 Trochodendron aralioides HOM05D005804 ORTHO05D006849 5.5e-34 149.1 197 43.1
arahy.Tifrunner.gnm1.ann1.I073XK Arachis hypogaea HOM05D005804 ORTHO05D006849 4.6e-33 146.0 198 39.9
arahy.Tifrunner.gnm1.ann1.PR501J Arachis hypogaea HOM05D005804 ORTHO05D006849 3.0e-32 143.3 229 35.8
Medtr2g045240 Medicago truncatula HOM05D005804 ORTHO05D006849 3.0e-32 143.3 194 42.8
Medtr2g045245 Medicago truncatula HOM05D005804 ORTHO05D006849 3.0e-32 143.3 194 42.8
Medtr3g099220 Medicago truncatula HOM05D005804 ORTHO05D006849 3.0e-32 143.3 194 42.8
Lj1g0008882 Lotus japonicus HOM05D005804 ORTHO05D006849 1.9e-31 140.6 200 41.0
Psat5g051400 Pisum sativum HOM05D005804 ORTHO05D006849 1.9e-31 140.6 221 40.3
Gohir.A07G051132 Gossypium hirsutum HOM05D005804 ORTHO05D006849 2.5e-31 140.2 148 45.3
TPR.G14211 Trifolium pratense HOM05D005804 ORTHO05D006849 5.7e-31 139.0 233 36.5
Gohir.D07G055532 Gossypium hirsutum HOM05D005804 ORTHO05D006849 1.3e-30 137.9 167 41.3
SHI10578 Sapria himalayana HOM05D005804 ORTHO05D006849 2.1e-30 137.1 188 41.5
Thhalv10025155m.g Eutrema salsugineum HOM05D005804 ORTHO05D006849 2.8e-30 136.7 206 39.8
Ca_16047_v3 Cicer arietinum L. HOM05D005804 ORTHO05D006849 6.2e-30 135.6 221 39.8
HPP92_013611 Vanilla planifolia HOM05D005804 ORTHO05D006849 6.2e-30 135.6 157 44.6
VMungo1309G0122 Vigna mungo HOM05D005804 ORTHO05D006849 8.2e-30 135.2 202 38.1
Carub.0007s1617 Capsella rubella HOM05D005804 ORTHO05D006849 1.1e-29 134.8 137 46.0
Lj9A479T55 Lonicera japonica HOM05D005804 ORTHO05D006849 1.4e-29 134.4 171 45.6
SGA_v2.0_scaffold110G31174 Striga asiatica HOM05D052586 ORTHO05D006849 1.2e-28 131.3 105 57.1
MELO3C002363.2 Cucumis melo HOM05D005804 ORTHO05D006849 3.4e-28 129.8 211 40.8
Phvul.009G166301 Phaseolus vulgaris HOM05D005804 ORTHO05D006849 5.0e-27 125.9 164 40.2
Os09g0506900 Oryza sativa ssp. japonica HOM05D005804 ORTHO05D006849 1.1e-26 124.8 233 37.8
Glyma.06G170000 Glycine max HOM05D005804 ORTHO05D006849 2.5e-26 123.6 142 43.0
ATR0178G019 Amborella trichopoda HOM05D005804 ORTHO05D006849 2.7e-25 120.2 118 49.2
Lalb_Chr08g0237181 Lupinus albus HOM05D005804 ORTHO05D006849 1.3e-24 117.9 107 52.3
vmacro16719 Vaccinium macrocarpon HOM05D005804 ORTHO05D006849 5.7e-23 112.5 132 47.0
Zm00001eb102430 Zea mays HOM05D005804 ORTHO05D006849 1.3e-19 101.3 224 35.7
unitig_26.g9610 Utricularia gibba HOM05D005804 ORTHO05D006849 1.2e-17 94.7 222 32.9
Sed0001636 Sechium edule HOM05D005804 ORTHO05D006849 2.7e-17 93.6 139 40.3
Oeu016044.4 Olea europaea HOM05D005804 ORTHO05D006849 1.0e-16 91.7 128 39.1
Dinv11177 Davidia involucrata HOM05D005804 ORTHO05D006849 3.3e-15 86.7 238 34.5
Nitab4.5_0001180g0250 Nicotiana tabacum HOM05D005804 ORTHO05D006849 1.2e-12 78.2 101 40.6
ECA247G1629 Erigeron canadensis HOM05D005804 ORTHO05D006849 2.5e-10 70.5 109 37.6
SalBow2G1912 Salvia bowleyana HOM05D000011 ORTHO05D000018 1.2e-09 68.2 71 52.1
AagrBONN_evm.TU.Sc2ySwM_362.247 Anthoceros agrestis HOM05D005804 ORTHO05D006849 2.7e-09 67.0 117 29.1
Pp3c6_21480 Physcomitrium patens HOM05D005804 ORTHO05D006849 5.1e-08 62.8 121 28.1


User provided reference genes

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