Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62034665 Chenopodium quinoa HOM05D007654 ORTHO05D009697 2.2e-38 161.8 80 100.0
EL10Ac7g17424 Beta vulgaris HOM05D007654 ORTHO05D009697 1.4e-27 125.9 78 75.6
AUR62008575 Chenopodium quinoa HOM05D000096 ORTHO05D000045 1.4e-27 125.9 63 98.4
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 1.4e-27 125.9 63 96.8
Hund18071 Selenicereus undatus HOM05D007654 ORTHO05D009697 9.1e-24 113.2 65 81.5
CiPaw.07G102300 Carya illinoinensis HOM05D007654 ORTHO05D009697 5.0e-22 107.5 81 61.7
Cfa005999 Carpinus fangiana HOM05D007654 ORTHO05D009697 1.4e-21 105.9 81 63.0
CSS0025949 Camellia sinensis var. sinensis HOM05D007654 ORTHO05D009697 4.2e-21 104.4 78 62.8
FAN27G0435 Fragaria x ananassa HOM05D000091 ORTHO05D003679 4.2e-21 104.4 72 63.9
GSVIVG01010984001 Vitis vinifera HOM05D007654 ORTHO05D009697 4.2e-21 104.4 78 60.3
Lj1g0000519 Lotus japonicus HOM05D007654 ORTHO05D009697 5.5e-21 104.0 78 61.5
Nn3g21360 Nelumbo nucifera HOM05D007654 ORTHO05D009697 5.5e-21 104.0 81 58.0
Hma1.2p1_0209F.1_g088920 Hydrangea macrophylla HOM05D007654 ORTHO05D009697 7.2e-21 103.6 79 59.5
TWI59G0903 Tripterygium wilfordii HOM05D007654 ORTHO05D009697 1.2e-20 102.8 77 58.4
FAN24G2398 Fragaria x ananassa HOM05D000091 ORTHO05D003679 3.6e-20 101.3 72 62.5
Manes.05G066600 Manihot esculenta HOM05D007654 ORTHO05D009697 3.6e-20 101.3 79 59.5
Atru.chr5.1253 Acer truncatum HOM05D007654 ORTHO05D009697 6.1e-20 100.5 78 56.4
Aa31LG10G16730 Aethionema arabicum HOM05D007654 ORTHO05D009697 7.9e-20 100.1 78 61.5
FAN15G1923 Fragaria x ananassa HOM05D000091 ORTHO05D003679 1.0e-19 99.8 72 61.1
QL12p024465 Quercus lobata HOM05D007654 ORTHO05D009697 1.0e-19 99.8 78 57.7
COL.COLO4_08007 Corchorus olitorius HOM05D000091 ORTHO05D003679 1.4e-19 99.4 79 55.7
TPR.G9273 Trifolium pratense HOM05D007654 ORTHO05D009697 1.8e-19 99.0 78 59.0
Aqoxy2G03067 Aquilegia oxysepala HOM05D007654 ORTHO05D009697 2.3e-19 98.6 80 57.5
Dinv33011 Davidia involucrata HOM05D007654 ORTHO05D009697 2.3e-19 98.6 78 57.7
ClCG09G006300 Citrullus lanatus HOM05D007654 ORTHO05D009697 3.0e-19 98.2 79 53.2
Gohir.A12G009300 Gossypium hirsutum HOM05D007654 ORTHO05D009697 3.0e-19 98.2 77 55.8
Gohir.D12G009200 Gossypium hirsutum HOM05D007654 ORTHO05D009697 3.0e-19 98.2 77 55.8
Gorai.008G009300 Gossypium raimondii HOM05D007654 ORTHO05D009697 3.0e-19 98.2 77 55.8
HanXRQChr11g0350121 Helianthus annuus HOM05D007654 ORTHO05D009697 3.0e-19 98.2 78 57.7
Carub.0005s2957 Capsella rubella HOM05D007654 ORTHO05D009697 6.7e-19 97.1 78 57.7
PGR119G1851 Punica granatum HOM05D007654 ORTHO05D009697 6.7e-19 97.1 79 58.2
AL5G45700 Arabidopsis lyrata HOM05D007654 ORTHO05D009697 8.8e-19 96.7 78 57.7
BolC8t51346H Brassica oleracea HOM05D007654 ORTHO05D009697 8.8e-19 96.7 78 56.4
Duzib138G0105 Durio zibethinus HOM05D007654 ORTHO05D009697 8.8e-19 96.7 78 56.4
Nitab4.5_0002006g0110 Nicotiana tabacum HOM05D007654 ORTHO05D009697 8.8e-19 96.7 81 58.0
MELO3C016052.2 Cucumis melo HOM05D007654 ORTHO05D009697 1.1e-18 96.3 73 56.2
Medtr7g108290 Medicago truncatula HOM05D000091 ORTHO05D003679 1.1e-18 96.3 79 58.2
Lsat_1_v5_gn_8_54301 Lactuca sativa HOM05D007654 ORTHO05D009697 2.0e-18 95.5 78 53.8
Manes.01G215200 Manihot esculenta HOM05D007654 ORTHO05D009697 2.0e-18 95.5 78 57.7
A09p54770 Brassica napus HOM05D007654 ORTHO05D009697 3.3e-18 94.7 78 53.8
C08p37630 Brassica napus HOM05D007654 ORTHO05D009697 3.3e-18 94.7 78 53.8
BraA09t40886Z Brassica rapa HOM05D007654 ORTHO05D009697 3.3e-18 94.7 78 53.8
Cc01_g20410 Coffea canephora HOM05D007654 ORTHO05D009697 3.3e-18 94.7 78 55.1
CsaV3_7G028850 Cucumis sativus L. HOM05D007654 ORTHO05D009697 3.3e-18 94.7 69 58.0
Thhalv10006348m.g Eutrema salsugineum HOM05D007654 ORTHO05D009697 3.3e-18 94.7 78 56.4
AT3G62920 Arabidopsis thaliana HOM05D007654 ORTHO05D009697 5.7e-18 94.0 78 55.1
Thecc.01G292900 Theobroma cacao HOM05D007654 ORTHO05D009697 7.4e-18 93.6 76 57.9
TAR636G0595 Trochodendron aralioides HOM05D007654 ORTHO05D009697 7.4e-18 93.6 77 57.1
Haze_04848 Corylus avellana HOM05D007654 ORTHO05D009697 9.7e-18 93.2 110 47.3
Eucgr.H01198 Eucalyptus grandis HOM05D007654 ORTHO05D009697 9.7e-18 93.2 78 55.1
vmacro14977 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 9.7e-18 93.2 66 65.2
CARHR173210 Cardamine hirsuta HOM05D007654 ORTHO05D009697 1.3e-17 92.8 78 53.8
Lsat_1_v5_gn_9_47321 Lactuca sativa HOM05D007654 ORTHO05D009697 1.3e-17 92.8 78 52.6
MD03G1278400 Malus domestica HOM05D007654 ORTHO05D009697 1.3e-17 92.8 70 60.0
PGSC0003DMG400011382 Solanum tuberosum HOM05D007654 ORTHO05D009697 1.7e-17 92.4 79 54.4
Solyc09g074620.3 Solanum lycopersicum HOM05D007654 ORTHO05D009697 2.2e-17 92.0 79 54.4
Sopen09g029490 Solanum pennellii HOM05D007654 ORTHO05D009697 2.2e-17 92.0 79 54.4
Glyma.19G207800 Glycine max HOM05D007654 ORTHO05D009697 2.8e-17 91.7 78 55.1
Phvul.001G203700 Phaseolus vulgaris HOM05D007654 ORTHO05D009697 2.8e-17 91.7 78 55.1
Prupe.8G254700 Prunus persica HOM05D007654 ORTHO05D009697 2.8e-17 91.7 74 54.1
ECA236G4373 Erigeron canadensis HOM05D007654 ORTHO05D009697 3.7e-17 91.3 78 55.1
SalBow3G4040 Salvia bowleyana HOM05D007654 ORTHO05D009697 3.7e-17 91.3 70 57.1
arahy.Tifrunner.gnm1.ann1.4942C7 Arachis hypogaea HOM05D007654 ORTHO05D009697 4.8e-17 90.9 71 59.2
Cpa.g.sc9.182 Carica papaya HOM05D007654 ORTHO05D009697 4.8e-17 90.9 63 60.3
Sed0025850 Sechium edule HOM05D007654 ORTHO05D009697 4.8e-17 90.9 69 59.4
Potri.014G133600 Populus trichocarpa HOM05D007654 ORTHO05D009697 6.3e-17 90.5 79 51.9
Ciclev10023123m.g Citrus clementina HOM05D007654 ORTHO05D009697 8.2e-17 90.1 78 51.3
Migut.D00166 Erythranthe guttata HOM05D007654 ORTHO05D009697 1.1e-16 89.7 70 62.9
Glyma.03G210600 Glycine max HOM05D007654 ORTHO05D009697 1.1e-16 89.7 78 53.8
RcHm_v2.0_Chr6g0292931 Rosa chinensis HOM05D007654 ORTHO05D009697 1.1e-16 89.7 72 56.9
Lalb_Chr15g0078691 Lupinus albus HOM05D007654 ORTHO05D009697 1.4e-16 89.4 70 55.7
Rhsim01G0281900 Rhododendron simsii HOM05D007654 ORTHO05D009697 1.4e-16 89.4 79 57.0
MD11G1300800 Malus domestica HOM05D007654 ORTHO05D009697 2.4e-16 88.6 69 56.5
BcaB02g08089 Brassica carinata HOM05D007654 ORTHO05D009697 9.1e-16 86.7 78 50.0
CANSAT25G3801 Cannabis sativa HOM05D007654 ORTHO05D009697 1.6e-15 85.9 74 52.7
FvH4_2g24970 Fragaria vesca HOM05D007654 ORTHO05D009697 1.6e-15 85.9 62 61.3
C04p30320 Brassica napus HOM05D007654 ORTHO05D009697 2.6e-15 85.1 68 54.4
BolC4t24565H Brassica oleracea HOM05D007654 ORTHO05D009697 2.6e-15 85.1 68 54.4
PSO170G3373 Papaver somniferum HOM05D007654 ORTHO05D009697 3.5e-15 84.7 79 46.8
Oeu057570.1 Olea europaea HOM05D007654 ORTHO05D009697 1.3e-14 82.8 63 57.1
Zm00001eb365450 Zea mays HOM05D007654 ORTHO05D009697 2.9e-14 81.6 71 60.6
A04p00450 Brassica napus HOM05D007654 ORTHO05D009697 6.5e-14 80.5 77 48.1
BraA04t15764Z Brassica rapa HOM05D007654 ORTHO05D009697 6.5e-14 80.5 77 48.1
Os05g0371500 Oryza sativa ssp. japonica HOM05D007654 ORTHO05D009697 1.1e-13 79.7 52 67.3
unitig_0.g650 Utricularia gibba HOM05D007654 ORTHO05D009697 1.5e-13 79.3 72 48.6
Nitab4.5_0001102g0070 Nicotiana tabacum HOM05D007654 ORTHO05D009697 1.9e-13 79.0 58 63.8
Ca_09124_v3 Cicer arietinum L. HOM05D000091 ORTHO05D003679 3.2e-13 78.2 62 59.7
MBI18_g01968_MAGBIO Magnolia biondii HOM05D007654 ORTHO05D009697 4.2e-13 77.8 69 52.2
FAN20G1580 Fragaria x ananassa HOM05D007654 ORTHO05D009697 7.2e-13 77.0 63 57.1
Eucgr.L03487 Eucalyptus grandis HOM05D007654 ORTHO05D009697 1.6e-12 75.9 62 56.5
Dinv19737 Davidia involucrata HOM05D007654 ORTHO05D009697 2.7e-12 75.1 52 61.5
Sabra14G0099700 Salix brachista HOM05D000091 ORTHO05D003679 2.7e-12 75.1 63 57.1
arahy.Tifrunner.gnm1.ann1.3EGQ08 Arachis hypogaea HOM05D007654 ORTHO05D009697 4.7e-12 74.3 62 56.5
Actinidia21074 Actinidia chinensis HOM05D007654 ORTHO05D009697 6.1e-12 73.9 52 61.5
Actinidia21070 Actinidia chinensis HOM05D007654 ORTHO05D009697 1.8e-11 72.4 50 66.0
arahy.Tifrunner.gnm1.ann1.559R1C Arachis hypogaea HOM05D007654 ORTHO05D009697 1.7e-09 65.9 67 50.7
vmacro14982 Vaccinium macrocarpon HOM05D007654 ORTHO05D009697 1.7e-09 65.9 48 62.5
SEGI_14019 Sequoiadendron giganteum HOM05D007654 ORTHO05D009697 4.8e-09 64.3 51 52.9
Lsat_1_v5_gn_0_9401 Lactuca sativa HOM05D007654 ORTHO05D009697 1.8e-08 62.4 56 50.0
AagrBONN_evm.TU.Sc2ySwM_344.4968 Anthoceros agrestis HOM05D007654 ORTHO05D009697 4.1e-08 61.2 48 56.2
Mapoly0101s0010 Marchantia polymorpha HOM05D007654 ORTHO05D009697 2.2e-06 55.5 50 54.0


User provided reference genes

Program Settings