Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62034630 Chenopodium quinoa HOM05D006618 ORTHO05D008291 7.9e-96 354.0 206 100.0
AUR62036645 Chenopodium quinoa HOM05D006618 ORTHO05D008291 7.2e-65 251.1 206 77.2
Ah.08g212660 Amaranthus hybridus HOM05D006618 ORTHO05D008291 4.2e-49 198.7 204 64.2
EL10Ac7g17390 Beta vulgaris HOM05D006618 ORTHO05D008291 8.0e-48 194.5 201 62.2
Hund18083 Selenicereus undatus HOM05D006618 ORTHO05D008291 1.3e-42 177.2 204 54.4
Sc17g0003540 Simmondsia chinensis HOM05D006618 ORTHO05D008291 6.3e-37 158.3 205 49.8
VMungo1383G0445 Vigna mungo HOM05D006618 ORTHO05D008291 3.5e-35 152.5 203 46.3
CSS0038517 Camellia sinensis var. sinensis HOM05D006618 ORTHO05D008291 1.0e-34 151.0 205 51.7
Manes.05G067500 Manihot esculenta HOM05D006618 ORTHO05D008291 1.7e-34 150.2 202 51.5
Phvul.001G202800 Phaseolus vulgaris HOM05D006618 ORTHO05D008291 2.9e-34 149.4 203 45.3
CiPaw.08G099900 Carya illinoinensis HOM05D006618 ORTHO05D008291 2.5e-33 146.4 205 50.2
Gohir.A11G117500 Gossypium hirsutum HOM05D006618 ORTHO05D008291 4.2e-33 145.6 200 48.0
Medtr7g108100 Medicago truncatula HOM05D006618 ORTHO05D008291 5.5e-33 145.2 206 50.0
MSTRG.18188 Avicennia marina HOM05D006618 ORTHO05D008291 9.5e-33 144.4 203 45.8
Hma1.2p1_0399F.1_g144140 Hydrangea macrophylla HOM05D006618 ORTHO05D008291 9.5e-33 144.4 208 46.6
Sed0008392 Sechium edule HOM05D006618 ORTHO05D008291 3.6e-32 142.5 207 47.8
Haze_04795 Corylus avellana HOM05D006618 ORTHO05D008291 4.7e-32 142.1 206 44.7
Peaxi162Scf01039g00026 Petunia axillaris HOM05D006618 ORTHO05D008291 1.0e-31 141.0 208 46.6
CsaV3_7G028720 Cucumis sativus L. HOM05D006618 ORTHO05D008291 2.3e-31 139.8 205 51.7
Duzib211G0091 Durio zibethinus HOM05D006618 ORTHO05D008291 2.3e-31 139.8 206 47.1
Haze_04826 Corylus avellana HOM05D006618 ORTHO05D008291 4.0e-31 139.0 209 44.5
Potri.014G134700 Populus trichocarpa HOM05D006618 ORTHO05D008291 4.0e-31 139.0 207 46.9
PGR119G1443 Punica granatum HOM05D006618 ORTHO05D008291 4.0e-31 139.0 212 48.1
Atru.chr5.1237 Acer truncatum HOM05D006618 ORTHO05D008291 5.2e-31 138.7 201 46.3
Glyma.03G209500 Glycine max HOM05D006618 ORTHO05D008291 5.2e-31 138.7 205 42.9
vmacro02504 Vaccinium macrocarpon HOM05D006618 ORTHO05D008291 5.2e-31 138.7 210 45.7
Solyc06g084500.3 Solanum lycopersicum HOM05D006618 ORTHO05D008291 6.8e-31 138.3 202 45.0
Ca_23188_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 8.9e-31 137.9 206 50.5
Nitab4.5_0012299g0010 Nicotiana tabacum HOM05D006618 ORTHO05D008291 1.2e-30 137.5 202 44.6
ClCG09G006430 Citrullus lanatus HOM05D006618 ORTHO05D008291 1.5e-30 137.1 206 51.0
Glyma.19G206900 Glycine max HOM05D006618 ORTHO05D008291 3.4e-30 136.0 205 42.9
Sed0009421 Sechium edule HOM05D006618 ORTHO05D008291 3.4e-30 136.0 206 45.1
SGA_v2.0_scaffold11G05756 Striga asiatica HOM05D006618 ORTHO05D008291 3.4e-30 136.0 204 50.5
Aqoxy5G00606 Aquilegia oxysepala HOM05D006618 ORTHO05D008291 5.7e-30 135.2 203 40.9
Lsat_1_v5_gn_9_4841 Lactuca sativa HOM05D006618 ORTHO05D008291 7.5e-30 134.8 203 47.8
Dinv33000 Davidia involucrata HOM05D006618 ORTHO05D008291 1.7e-29 133.7 205 44.4
PGSC0003DMG400024043 Solanum tuberosum HOM05D006618 ORTHO05D008291 1.7e-29 133.7 203 44.3
TWI12G0445 Tripterygium wilfordii HOM05D006618 ORTHO05D008291 2.2e-29 133.3 213 48.4
Sopen06g035880 Solanum pennellii HOM05D006618 ORTHO05D008291 4.9e-29 132.1 204 44.1
Duzib138G1186 Durio zibethinus HOM05D006618 ORTHO05D008291 6.3e-29 131.7 208 48.6
PSO170G6580 Papaver somniferum HOM05D006618 ORTHO05D008291 6.3e-29 131.7 199 44.2
PSO210G2131 Papaver somniferum HOM05D006618 ORTHO05D008291 8.3e-29 131.3 199 44.2
MELO3C015900.2 Cucumis melo HOM05D006618 ORTHO05D008291 1.1e-28 131.0 220 49.5
THA.LOC104801197 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 1.1e-28 131.0 206 46.1
CAN.G1209.34 Capsicum annuum HOM05D006618 ORTHO05D008291 5.4e-28 128.6 204 44.1
Nn3g21320 Nelumbo nucifera HOM05D006618 ORTHO05D008291 5.4e-28 128.6 191 44.0
Nitab4.5_0002093g0230 Nicotiana tabacum HOM05D006618 ORTHO05D008291 7.0e-28 128.3 202 42.6
SalBow3G3170 Salvia bowleyana HOM05D006618 ORTHO05D008291 1.2e-27 127.5 206 47.6
TPR.G32314 Trifolium pratense HOM05D006618 ORTHO05D008291 1.6e-27 127.1 219 45.2
Psat3g024440 Pisum sativum HOM05D006618 ORTHO05D008291 3.5e-27 125.9 207 46.9
ECA247G1808 Erigeron canadensis HOM05D006618 ORTHO05D008291 4.5e-27 125.6 204 47.1
Lj1g0015584 Lotus japonicus HOM05D006618 ORTHO05D008291 5.9e-27 125.2 208 38.0
FvH4_2g24850 Fragaria vesca HOM05D006618 ORTHO05D008291 1.0e-26 124.4 209 43.1
FAN24G2031 Fragaria x ananassa HOM05D006618 ORTHO05D008291 1.0e-26 124.4 209 43.1
Migut.D00152 Erythranthe guttata HOM05D006618 ORTHO05D008291 2.3e-26 123.2 207 43.0
Lj1C37G5 Lonicera japonica HOM05D000143 ORTHO05D000072 2.9e-26 122.9 198 42.4
FAN27G1167 Fragaria x ananassa HOM05D006618 ORTHO05D008291 3.8e-26 122.5 209 42.6
Lalb_Chr18g0047451 Lupinus albus HOM05D006618 ORTHO05D008291 1.1e-25 120.9 201 45.8
COL.COLO4_08018 Corchorus olitorius HOM05D006618 ORTHO05D008291 1.5e-25 120.6 205 40.0
Prupe.8G253400 Prunus persica HOM05D006618 ORTHO05D008291 1.9e-25 120.2 236 39.8
Oeu057561.4 Olea europaea HOM05D006618 ORTHO05D008008 3.3e-25 119.4 184 44.0
HanXRQChr15g0466141 Helianthus annuus HOM05D006618 ORTHO05D008291 4.3e-25 119.0 206 45.6
TAR362G0318 Trochodendron aralioides HOM05D006618 ORTHO05D008291 7.3e-25 118.2 203 38.4
Gorai.007G131200 Gossypium raimondii HOM05D006618 ORTHO05D008291 9.5e-25 117.9 194 40.7
Sabra14G0100400 Salix brachista HOM05D006618 ORTHO05D008291 9.5e-25 117.9 207 44.4
Eucgr.H01207 Eucalyptus grandis HOM05D006618 ORTHO05D008291 1.2e-24 117.5 206 46.6
QL12p024238 Quercus lobata HOM05D006618 ORTHO05D008291 1.6e-24 117.1 194 42.3
MD11G1299100 Malus domestica HOM05D006618 ORTHO05D008291 2.1e-24 116.7 245 37.6
RcHm_v2.0_Chr6g0292701 Rosa chinensis HOM05D006618 ORTHO05D008291 3.6e-24 115.9 208 41.8
CARHR251610 Cardamine hirsuta HOM05D006618 ORTHO05D008291 8.0e-24 114.8 207 38.2
Aa31LG5G2680 Aethionema arabicum HOM05D006618 ORTHO05D008291 1.0e-23 114.4 204 39.7
Carub.0006s3388 Capsella rubella HOM05D006618 ORTHO05D008291 1.4e-23 114.0 200 39.0
Cfa006056 Carpinus fangiana HOM05D006618 ORTHO05D008291 1.8e-23 113.6 203 37.9
MD03G1276600 Malus domestica HOM05D006618 ORTHO05D008291 2.3e-23 113.2 237 37.1
Ca_09115_v3 Cicer arietinum L. HOM05D006618 ORTHO05D008291 5.2e-23 112.1 146 58.2
Thhalv10028994m.g Eutrema salsugineum HOM05D006618 ORTHO05D008291 5.2e-23 112.1 206 39.8
Rhsim13G0016600 Rhododendron simsii HOM05D006618 ORTHO05D008291 1.2e-22 110.9 250 38.0
AT4G03180 Arabidopsis thaliana HOM05D006618 ORTHO05D008291 3.4e-22 109.4 200 38.0
FAN15G0256 Fragaria x ananassa HOM05D006618 ORTHO05D008291 4.4e-22 109.0 206 39.3
ATR0706G074 Amborella trichopoda HOM05D006618 ORTHO05D008291 9.8e-22 107.8 215 40.9
Cc01_g20320 Coffea canephora HOM05D006618 ORTHO05D008291 1.7e-21 107.1 200 40.5
BolC3t16012H Brassica oleracea HOM05D006618 ORTHO05D008291 4.9e-21 105.5 206 35.9
Ciclev10022357m.g Citrus clementina HOM05D006618 ORTHO05D008291 1.1e-20 104.4 204 39.2
Sp6g03210 Schrenkiella parvula HOM05D006618 ORTHO05D008291 1.4e-20 104.0 203 36.9
Thecc.01G291700 Theobroma cacao HOM05D006618 ORTHO05D008291 2.4e-20 103.2 206 40.8
AL6G49760 Arabidopsis lyrata HOM05D006618 ORTHO05D008291 1.2e-19 100.9 200 36.0
C03p37140 Brassica napus HOM05D006618 ORTHO05D008291 1.2e-19 100.9 205 36.1
Zm00001eb410530 Zea mays HOM05D006618 ORTHO05D008291 2.0e-19 100.1 185 38.9
BcaC01g06702 Brassica carinata HOM05D006618 ORTHO05D008291 3.5e-19 99.4 205 35.6
BcaB05g23692 Brassica carinata HOM05D006618 ORTHO05D008291 4.6e-19 99.0 204 35.8
BcaB01g02511 Brassica carinata HOM05D006618 ORTHO05D008291 1.5e-17 94.0 203 39.4
Zm00001eb137700 Zea mays HOM05D006618 ORTHO05D008291 2.5e-17 93.2 181 35.9
BcaC03g16213 Brassica carinata HOM05D006618 ORTHO05D008291 3.3e-17 92.8 200 41.0
BolC2t10017H Brassica oleracea HOM05D006618 ORTHO05D008291 3.3e-17 92.8 200 41.0
GSVIVG01010994001 Vitis vinifera HOM05D006618 ORTHO05D008291 9.5e-17 91.3 151 42.4
Os12g0538100 Oryza sativa ssp. japonica HOM05D006618 ORTHO05D008291 1.2e-16 90.9 191 36.6
A02p25130 Brassica napus HOM05D006618 ORTHO05D008291 2.1e-16 90.1 201 40.8
MBI19_g13630_MAGBIO Magnolia biondii HOM05D006618 ORTHO05D008291 6.2e-16 88.6 133 52.6
BraA02t07501Z Brassica rapa HOM05D006618 ORTHO05D008291 1.1e-15 87.8 201 40.3
HPP92_017865 Vanilla planifolia HOM05D006618 ORTHO05D008291 1.1e-15 87.8 215 39.5
C02p39890 Brassica napus HOM05D006618 ORTHO05D008291 6.8e-15 85.1 201 39.8
arahy.Tifrunner.gnm1.ann1.160DKY Arachis hypogaea HOM05D006618 ORTHO05D008291 8.9e-15 84.7 129 47.3
unitig_22.g5246 Utricularia gibba HOM05D006618 ORTHO05D008291 2.0e-14 83.6 195 41.5
Actinidia24851 Actinidia chinensis HOM05D006618 ORTHO05D008291 4.4e-14 82.4 112 45.5
arahy.Tifrunner.gnm1.ann1.1H6IZY Arachis hypogaea HOM05D006618 ORTHO05D008291 2.2e-13 80.1 130 42.3
FAN20G2846 Fragaria x ananassa HOM05D006618 ORTHO05D008291 2.4e-12 76.6 183 37.7
BcaB05g22921 Brassica carinata HOM05D001082 ORTHO05D008291 4.1e-12 75.9 171 40.9
THA.LOC104827373 Tarenaya hassleriana HOM05D006618 ORTHO05D008291 1.2e-11 74.3 121 44.6
Atru.chr5.1270 Acer truncatum HOM05D006618 ORTHO05D008291 2.0e-11 73.6 128 40.6
CANSAT25G1401 Cannabis sativa HOM05D006618 ORTHO05D008291 2.7e-11 73.2 203 40.4
Cfa006024 Carpinus fangiana HOM05D006618 ORTHO05D008291 7.3e-09 65.1 66 51.5
arahy.Tifrunner.gnm1.ann1.MTA467 Arachis hypogaea HOM05D006618 ORTHO05D008291 1.4e-07 60.8 130 42.3
arahy.Tifrunner.gnm1.ann1.915FC2 Arachis hypogaea HOM05D006618 ORTHO05D008291 1.8e-07 60.5 130 41.5
Gohir.D11G122400 Gossypium hirsutum HOM05D006618 ORTHO05D008291 1.5e-06 57.4 138 34.1
SHI15557 Sapria himalayana HOM05D006618 ORTHO05D008291 7.5e-06 55.1 113 38.9


User provided reference genes

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