Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62034490 Chenopodium quinoa HOM05D006018 ORTHO05D007545 3.6e-177 624.8 312 100.0
EL10Ac4g08718 Beta vulgaris HOM05D006018 ORTHO05D007545 1.1e-154 550.1 313 86.3
Ah.06g186820 Amaranthus hybridus HOM05D006018 ORTHO05D007545 2.0e-143 512.7 333 76.6
Hund06805 Selenicereus undatus HOM05D006018 ORTHO05D007545 2.8e-137 492.3 325 75.4
Lj6g0008960 Lotus japonicus HOM05D006018 ORTHO05D007545 4.9e-134 481.5 305 76.4
AUR62034169 Chenopodium quinoa HOM05D006018 ORTHO05D007545 1.4e-128 463.4 241 95.4
Dinv08587 Davidia involucrata HOM05D006018 ORTHO05D007545 1.8e-128 463.0 312 72.4
Lalb_Chr19g0128951 Lupinus albus HOM05D006018 ORTHO05D007545 4.1e-128 461.8 308 73.4
TPR.G19796 Trifolium pratense HOM05D006018 ORTHO05D007545 9.0e-128 460.7 313 73.2
Ca_12272_v3 Cicer arietinum L. HOM05D006018 ORTHO05D007545 2.0e-127 459.5 306 73.5
Medtr1g048370 Medicago truncatula HOM05D006018 ORTHO05D007545 3.4e-127 458.8 306 73.9
Psat6g049120 Pisum sativum HOM05D006018 ORTHO05D007545 1.0e-126 457.2 306 73.5
MD07G1062200 Malus domestica HOM05D006018 ORTHO05D007545 1.4e-125 453.4 305 70.8
Aqoxy1G00667 Aquilegia oxysepala HOM05D006018 ORTHO05D007545 9.3e-125 450.7 308 70.1
PGSC0003DMG401001978 Solanum tuberosum HOM05D006018 ORTHO05D007545 2.1e-124 449.5 305 70.2
Gorai.012G019800 Gossypium raimondii HOM05D006018 ORTHO05D007545 7.9e-124 447.6 306 71.2
CSS0019594 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.3e-123 446.8 312 71.5
CSS0043702 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.3e-123 446.8 312 71.5
Gohir.D04G017100 Gossypium hirsutum HOM05D006018 ORTHO05D007545 3.0e-123 445.7 306 70.9
Peaxi162Scf00725g00522 Petunia axillaris HOM05D006018 ORTHO05D007545 3.0e-123 445.7 307 70.4
Duzib106G1265 Durio zibethinus HOM05D006018 ORTHO05D007545 5.1e-123 444.9 306 70.6
Phvul.007G234300 Phaseolus vulgaris HOM05D006018 ORTHO05D007545 1.1e-122 443.7 307 69.1
Sabra10G0189600 Salix brachista HOM05D006018 ORTHO05D007545 1.1e-122 443.7 308 72.1
MELO3C012335.2 Cucumis melo HOM05D006018 ORTHO05D007545 1.9e-122 443.0 306 70.6
PGR044G0766 Punica granatum HOM05D006018 ORTHO05D007545 1.9e-122 443.0 308 69.2
TWI38G2380 Tripterygium wilfordii HOM05D006018 ORTHO05D007545 1.9e-122 443.0 306 71.6
Migut.F00847 Erythranthe guttata HOM05D006018 ORTHO05D007545 2.5e-122 442.6 305 68.5
Potri.010G242600 Populus trichocarpa HOM05D006018 ORTHO05D007545 2.5e-122 442.6 306 71.6
Nitab4.5_0007799g0030 Nicotiana tabacum HOM05D006018 ORTHO05D007545 4.3e-122 441.8 305 69.2
CiPaw.13G043500 Carya illinoinensis HOM05D006018 ORTHO05D007545 5.7e-122 441.4 305 69.5
Ciclev10016037m.g Citrus clementina HOM05D006018 ORTHO05D007545 5.7e-122 441.4 312 69.2
Cpa.g.sc54.21 Carica papaya HOM05D006018 ORTHO05D007545 7.4e-122 441.0 305 70.8
TAR623G0250 Trochodendron aralioides HOM05D006018 ORTHO05D007545 7.4e-122 441.0 305 69.5
Gohir.A05G398800 Gossypium hirsutum HOM05D006018 ORTHO05D007545 9.7e-122 440.7 306 69.9
CSS0004952 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.3e-121 440.3 307 71.0
CANSAT56G4342 Cannabis sativa HOM05D006018 ORTHO05D007545 1.3e-121 440.3 305 69.2
Glyma.10G121524 Glycine max HOM05D006018 ORTHO05D007545 1.3e-121 440.3 309 68.0
MD02G1258600 Malus domestica HOM05D006018 ORTHO05D007545 1.3e-121 440.3 305 68.9
Solyc11g006550.3 Solanum lycopersicum HOM05D006018 ORTHO05D007545 1.3e-121 440.3 305 68.9
Prupe.2G072000 Prunus persica HOM05D006018 ORTHO05D007545 2.8e-121 439.1 305 69.5
Glyma.20G072400 Glycine max HOM05D006018 ORTHO05D007545 3.7e-121 438.7 307 68.4
Sopen11g002450 Solanum pennellii HOM05D006018 ORTHO05D007545 8.2e-121 437.6 305 68.5
CsaV3_5G035210 Cucumis sativus L. HOM05D006018 ORTHO05D007545 1.1e-120 437.2 306 69.3
Thecc.10G116100 Theobroma cacao HOM05D006018 ORTHO05D007545 1.1e-120 437.2 306 70.6
COL.COLO4_07822 Corchorus olitorius HOM05D006018 ORTHO05D007545 1.8e-120 436.4 309 70.9
arahy.Tifrunner.gnm1.ann1.QNY1I5 Arachis hypogaea HOM05D006018 ORTHO05D007545 2.4e-120 436.0 307 68.1
CAN.G143.25 Capsicum annuum HOM05D006018 ORTHO05D007545 2.4e-120 436.0 305 67.9
PSO384G0865 Papaver somniferum HOM05D006018 ORTHO05D007545 3.1e-120 435.6 305 68.2
VMungo0720G2948 Vigna mungo HOM05D006018 ORTHO05D007545 3.1e-120 435.6 307 67.8
HanXRQChr02g0053551 Helianthus annuus HOM05D006018 ORTHO05D007545 4.1e-120 435.3 305 69.2
arahy.Tifrunner.gnm1.ann1.Z71440 Arachis hypogaea HOM05D006018 ORTHO05D007545 5.3e-120 434.9 307 69.1
THA.LOC104801755 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 6.9e-120 434.5 306 68.3
THA.LOC104804947 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 6.9e-120 434.5 306 68.3
PSO339G6589 Papaver somniferum HOM05D006018 ORTHO05D007545 9.0e-120 434.1 305 67.9
arahy.Tifrunner.gnm1.ann1.Z7U9ST Arachis hypogaea HOM05D006018 ORTHO05D007545 1.2e-119 433.7 315 67.3
Nn6g34699 Nelumbo nucifera HOM05D006018 ORTHO05D007545 1.2e-119 433.7 305 68.5
ECA238G1473 Erigeron canadensis HOM05D006018 ORTHO05D007545 2.0e-119 433.0 308 66.6
CARHR103400 Cardamine hirsuta HOM05D006018 ORTHO05D007545 2.6e-119 432.6 308 67.5
THA.LOC104823771 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 3.4e-119 432.2 304 68.4
Cc02_g09390 Coffea canephora HOM05D006018 ORTHO05D007545 5.9e-119 431.4 312 66.0
FvH4_7g03231 Fragaria vesca HOM05D006018 ORTHO05D007545 5.9e-119 431.4 306 69.0
AL1G64680 Arabidopsis lyrata HOM05D006018 ORTHO05D007545 1.0e-118 430.6 304 68.4
Sed0014972 Sechium edule HOM05D006018 ORTHO05D007545 1.0e-118 430.6 307 68.4
SGA_v2.0_scaffold2G01315 Striga asiatica HOM05D006018 ORTHO05D007545 1.3e-118 430.3 302 67.5
Eucgr.J00283 Eucalyptus grandis HOM05D006018 ORTHO05D007545 2.9e-118 429.1 305 67.9
GSVIVG01034634001 Vitis vinifera HOM05D006018 ORTHO05D007545 2.9e-118 429.1 307 67.1
AT2G26230 Arabidopsis thaliana HOM05D006018 ORTHO05D007545 5.0e-118 428.3 305 67.5
BcaC06g35533 Brassica carinata HOM05D006018 ORTHO05D007545 5.0e-118 428.3 305 67.5
C07p13770 Brassica napus HOM05D006018 ORTHO05D007545 6.5e-118 427.9 305 67.5
arahy.Tifrunner.gnm1.ann1.V4FSHN Arachis hypogaea HOM05D006018 ORTHO05D007545 1.1e-117 427.2 323 65.0
BraA07t28684Z Brassica rapa HOM05D006018 ORTHO05D007545 1.1e-117 427.2 304 67.8
Carub.0002s0907 Capsella rubella HOM05D006018 ORTHO05D007545 1.1e-117 427.2 305 67.5
RcHm_v2.0_Chr1g0325281 Rosa chinensis HOM05D006018 ORTHO05D007545 1.1e-117 427.2 304 68.1
Sp3g21150 Schrenkiella parvula HOM05D006018 ORTHO05D007545 1.4e-117 426.8 308 66.2
SpUn0047_0030 Schrenkiella parvula HOM05D006018 ORTHO05D007545 1.4e-117 426.8 308 66.2
BolC7t41872H Brassica oleracea HOM05D006018 ORTHO05D007545 2.5e-117 426.0 305 67.5
A07p08930 Brassica napus HOM05D006018 ORTHO05D007545 3.2e-117 425.6 304 67.4
BcaB06g26497 Brassica carinata HOM05D006018 ORTHO05D007545 4.2e-117 425.2 308 65.9
FAN10G2047 Fragaria x ananassa HOM05D006018 ORTHO05D007545 9.4e-117 424.1 306 68.3
Manes.10G059900 Manihot esculenta HOM05D006018 ORTHO05D007545 9.4e-117 424.1 306 67.0
Aa31LG2G1810 Aethionema arabicum HOM05D006018 ORTHO05D007545 6.1e-116 421.4 305 66.9
Thhalv10021194m.g Eutrema salsugineum HOM05D006018 ORTHO05D007545 7.9e-116 421.0 305 66.2
Nitab4.5_0001781g0180 Nicotiana tabacum HOM05D006018 ORTHO05D007545 1.4e-115 420.2 305 67.5
SalBow3G1532 Salvia bowleyana HOM05D006018 ORTHO05D007545 2.3e-115 419.5 314 64.6
MSTRG.9035 Avicennia marina HOM05D006018 ORTHO05D007545 3.9e-115 418.7 305 64.6
Haze_03464 Corylus avellana HOM05D006018 ORTHO05D007545 9.7e-114 414.1 382 57.6
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 1.4e-112 410.2 276 71.7
Atru.chr12.1071 Acer truncatum HOM05D006018 ORTHO05D007545 5.3e-112 408.3 272 70.6
unitig_899.g14460 Utricularia gibba HOM05D006018 ORTHO05D007545 2.0e-111 406.4 305 63.0
CDE02G2990 Ceratophyllum demersum HOM05D006018 ORTHO05D007545 5.9e-111 404.8 305 62.6
ClCG05G021930 Citrullus lanatus HOM05D006018 ORTHO05D007545 7.7e-111 404.4 307 65.8
RcHm_v2.0_Chr1g0325311 Rosa chinensis HOM05D006018 ORTHO05D007545 1.1e-109 400.6 350 58.6
vmacro10321 Vaccinium macrocarpon HOM05D006018 ORTHO05D007545 1.1e-109 400.6 340 60.6
FAN01G2803 Fragaria x ananassa HOM05D006018 ORTHO05D007545 3.2e-109 399.1 305 65.2
Lsat_1_v5_gn_2_105841 Lactuca sativa HOM05D006018 ORTHO05D007545 1.6e-108 396.7 313 63.3
Zm00001eb146880 Zea mays HOM05D006018 ORTHO05D007545 3.7e-105 385.6 307 62.2
ATR0772G096 Amborella trichopoda HOM05D006018 ORTHO05D007545 3.2e-101 372.5 301 60.1
Actinidia34731 Actinidia chinensis HOM05D006018 ORTHO05D007545 4.0e-99 365.5 245 71.8
Nn2g14297 Nelumbo nucifera HOM05D006018 ORTHO05D007545 2.6e-98 362.8 305 60.3
Lj3A923T60 Lonicera japonica HOM05D006018 ORTHO05D007545 4.4e-98 362.1 261 67.8
Hma1.2p1_0381F.1_g139980 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 1.7e-97 360.1 240 71.2
FAN03G1346 Fragaria x ananassa HOM05D006018 ORTHO05D007545 2.2e-97 359.8 285 63.2
DCAR_004552 Daucus carota HOM05D006018 ORTHO05D007545 1.2e-95 354.0 250 68.8
HPP92_027461 Vanilla planifolia HOM05D006018 ORTHO05D007545 1.7e-94 350.1 306 59.5
Sc09g0005130 Simmondsia chinensis HOM05D006018 ORTHO05D007545 2.3e-91 339.7 211 75.4
Rhsim09G0141100 Rhododendron simsii HOM05D006018 ORTHO05D007545 9.8e-90 334.3 304 57.9
Pp3c14_15560 Physcomitrium patens HOM05D006018 ORTHO05D007545 1.5e-82 310.5 302 52.6
QL04p047894 Quercus lobata HOM05D006018 ORTHO05D007545 1.3e-81 307.4 209 68.9
SMO134G0227 Selaginella moellendorffii HOM05D006018 ORTHO05D007545 5.0e-78 295.4 296 52.7
AagrBONN_evm.TU.Sc2ySwM_344.453 Anthoceros agrestis HOM05D006018 ORTHO05D007545 1.0e-75 287.7 295 50.5
Mapoly0079s0008 Marchantia polymorpha HOM05D006018 ORTHO05D007545 2.3e-70 270.0 302 48.3
Cre12.g504950 Chlamydomonas reinhardtii HOM05D006018 ORTHO05D007545 1.9e-64 250.4 291 45.0
CSS0009212 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.2e-55 221.1 148 73.0
CSS0030296 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 5.1e-54 215.7 146 73.3
CBR_g20325 Chara braunii HOM05D006018 ORTHO05D007545 3.3e-53 213.0 180 54.4
MCO08G151 Micromonas commoda HOM05D006018 ORTHO05D007545 2.8e-52 209.9 293 37.5
PRCOL_00005817 Prasinoderma coloniale HOM05D006018 ORTHO05D007545 4.7e-52 209.1 319 41.4
Os01g0865100 Oryza sativa ssp. japonica HOM05D006018 ORTHO05D007545 3.6e-44 183.0 156 57.7
Oeu009248.1 Olea europaea HOM05D006018 ORTHO05D007545 1.9e-37 160.6 187 50.3
Hma1.2p1_0381F.1_g139990 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 3.6e-36 156.4 149 53.7
Cfa010524 Carpinus fangiana HOM05D006018 ORTHO05D007545 3.4e-34 149.8 149 51.0
SEGI_29992 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 1.1e-29 134.8 100 67.0
arahy.Tifrunner.gnm1.ann1.BN00BV Arachis hypogaea HOM05D006018 ORTHO05D007545 2.8e-28 130.2 96 67.7
arahy.Tifrunner.gnm1.ann1.WX42FR Arachis hypogaea HOM05D006018 ORTHO05D007545 4.8e-28 129.4 95 67.4
SEGI_30163 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 1.3e-17 94.7 70 60.0
FAN01G0562 Fragaria x ananassa HOM05D006018 ORTHO05D007545 4.2e-16 89.7 67 65.7
Eucgr.J00287 Eucalyptus grandis HOM05D006018 ORTHO05D007545 9.3e-16 88.6 58 69.0
SEGI_33218 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 1.9e-13 80.9 69 58.0
SEGI_30780 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 3.3e-13 80.1 64 60.9


User provided reference genes

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