Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62034365 Chenopodium quinoa HOM05D007703 ORTHO05D009731 9.9e-36 152.9 77 100.0
AUR62022343 Chenopodium quinoa HOM05D007703 ORTHO05D009731 1.8e-32 142.1 77 94.8
CiPaw.05G232600 Carya illinoinensis HOM05D007703 ORTHO05D009731 2.4e-21 105.1 75 72.0
Nitab4.5_0002566g0010 Nicotiana tabacum HOM05D007703 ORTHO05D009731 2.6e-20 101.7 79 70.9
Atru.chr13.1271 Acer truncatum HOM05D007703 ORTHO05D009731 3.4e-20 101.3 77 66.2
TWI56G0976 Tripterygium wilfordii HOM05D007703 ORTHO05D009731 5.9e-20 100.5 77 68.8
Hund26653 Selenicereus undatus HOM05D007703 ORTHO05D009731 2.2e-19 98.6 83 68.7
COL.COLO4_16476 Corchorus olitorius HOM05D007703 ORTHO05D009731 2.9e-19 98.2 77 68.8
FvH4_5g38090 Fragaria vesca HOM05D007703 ORTHO05D009731 2.9e-19 98.2 77 66.2
Nitab4.5_0000425g0040 Nicotiana tabacum HOM05D007703 ORTHO05D009731 2.9e-19 98.2 78 66.7
PGR042G2694 Punica granatum HOM05D007703 ORTHO05D009731 2.9e-19 98.2 76 67.1
Gohir.A06G038300 Gossypium hirsutum HOM05D007703 ORTHO05D009731 3.8e-19 97.8 77 66.2
Potri.005G167200 Populus trichocarpa HOM05D007703 ORTHO05D009731 3.8e-19 97.8 75 68.0
Duzib116G0261 Durio zibethinus HOM05D007703 ORTHO05D009731 5.0e-19 97.4 77 67.5
Gohir.D06G040000 Gossypium hirsutum HOM05D007703 ORTHO05D009731 5.0e-19 97.4 77 64.9
Gorai.010G044500 Gossypium raimondii HOM05D007703 ORTHO05D009731 5.0e-19 97.4 77 64.9
Prupe.1G511400 Prunus persica HOM05D007703 ORTHO05D009731 5.0e-19 97.4 77 66.2
RcHm_v2.0_Chr7g0240051 Rosa chinensis HOM05D007703 ORTHO05D009731 5.0e-19 97.4 77 67.5
Sabra05G0127000 Salix brachista HOM05D007703 ORTHO05D009731 5.0e-19 97.4 75 68.0
FAN13G1213 Fragaria x ananassa HOM05D007703 ORTHO05D009731 1.4e-18 95.9 77 64.9
FAN04G3187 Fragaria x ananassa HOM05D007703 ORTHO05D009731 2.5e-18 95.1 77 64.9
Thecc.08G112500 Theobroma cacao HOM05D007703 ORTHO05D009731 4.2e-18 94.4 77 66.2
MSTRG.24946 Avicennia marina HOM05D007703 ORTHO05D009731 5.5e-18 94.0 61 73.8
EL10Ac1g01693 Beta vulgaris HOM05D007703 ORTHO05D009731 5.5e-18 94.0 70 68.6
Ca_05260_v3 Cicer arietinum L. HOM05D007703 ORTHO05D009731 5.5e-18 94.0 59 76.3
Manes.02G156200 Manihot esculenta HOM05D007703 ORTHO05D009731 7.2e-18 93.6 78 65.4
Peaxi162Scf00160g01521 Petunia axillaris HOM05D007703 ORTHO05D009731 9.3e-18 93.2 81 69.1
HanXRQChr05g0144121 Helianthus annuus HOM05D007703 ORTHO05D009731 1.2e-17 92.8 67 70.1
QL12p035855 Quercus lobata HOM05D007703 ORTHO05D009731 1.2e-17 92.8 76 64.5
Sopen12g029570 Solanum pennellii HOM05D007703 ORTHO05D009731 1.2e-17 92.8 81 64.2
Cc10_g05880 Coffea canephora HOM05D007703 ORTHO05D009731 1.6e-17 92.4 77 67.5
ECA232G3100 Erigeron canadensis HOM05D007703 ORTHO05D009731 1.6e-17 92.4 79 64.6
PGSC0003DMG400008548 Solanum tuberosum HOM05D007703 ORTHO05D009731 1.6e-17 92.4 81 64.2
Glyma.13G087000 Glycine max HOM05D007703 ORTHO05D009731 2.1e-17 92.0 78 62.8
Lj1g0023708 Lotus japonicus HOM05D007703 ORTHO05D009731 2.1e-17 92.0 74 62.2
Hma1.2p1_0120F.1_g057000 Hydrangea macrophylla HOM05D007703 ORTHO05D009731 2.7e-17 91.7 54 81.5
arahy.Tifrunner.gnm1.ann1.0YA8SQ Arachis hypogaea HOM05D007703 ORTHO05D009731 3.6e-17 91.3 61 73.8
Phvul.008G170600 Phaseolus vulgaris HOM05D007703 ORTHO05D009731 4.6e-17 90.9 77 59.7
MELO3C022803.2 Cucumis melo HOM05D007703 ORTHO05D009731 6.1e-17 90.5 80 62.5
Os03g0385301 Oryza sativa ssp. japonica HOM05D007703 ORTHO05D009731 6.1e-17 90.5 79 59.5
Solyc12g056910.2 Solanum lycopersicum HOM05D007703 ORTHO05D009731 6.1e-17 90.5 81 63.0
Ciclev10003047m.g Citrus clementina HOM05D007703 ORTHO05D009731 7.9e-17 90.1 74 62.2
Sc20g0003040 Simmondsia chinensis HOM05D007703 ORTHO05D009731 7.9e-17 90.1 78 62.8
vmacro21226 Vaccinium macrocarpon HOM05D007703 ORTHO05D009731 7.9e-17 90.1 66 69.7
arahy.Tifrunner.gnm1.ann1.DJB4SG Arachis hypogaea HOM05D007703 ORTHO05D009731 1.0e-16 89.7 82 61.0
Eucgr.F00482 Eucalyptus grandis HOM05D007703 ORTHO05D009731 1.0e-16 89.7 75 62.7
Lalb_Chr04g0253231 Lupinus albus HOM05D007703 ORTHO05D009731 1.0e-16 89.7 74 60.8
GSVIVG01008983001 Vitis vinifera HOM05D007703 ORTHO05D009731 1.0e-16 89.7 78 62.8
CsaV3_5G023730 Cucumis sativus L. HOM05D007703 ORTHO05D009731 1.3e-16 89.4 58 74.1
Glyma.14G169200 Glycine max HOM05D007703 ORTHO05D009731 1.3e-16 89.4 78 60.3
Nn1g05271 Nelumbo nucifera HOM05D007703 ORTHO05D009731 1.8e-16 89.0 79 60.8
Psat0s3920g0040 Pisum sativum HOM05D007703 ORTHO05D009731 1.8e-16 89.0 81 61.7
Aa31LG7G6100 Aethionema arabicum HOM05D007703 ORTHO05D009731 2.3e-16 88.6 77 59.7
CANSAT25G3270 Cannabis sativa HOM05D007703 ORTHO05D009731 2.3e-16 88.6 83 56.6
CDE10G0679 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 2.3e-16 88.6 77 59.7
Sed0022194 Sechium edule HOM05D007703 ORTHO05D009731 2.3e-16 88.6 77 59.7
CAN.G144.17 Capsicum annuum HOM05D007703 ORTHO05D009731 3.0e-16 88.2 53 81.1
Thhalv10009245m.g Eutrema salsugineum HOM05D007703 ORTHO05D009731 3.9e-16 87.8 74 56.8
Sed0012287 Sechium edule HOM05D007703 ORTHO05D009731 3.9e-16 87.8 77 61.0
TPR.G1060 Trifolium pratense HOM05D007703 ORTHO05D009731 3.9e-16 87.8 76 61.8
Aqoxy6G00561 Aquilegia oxysepala HOM05D007703 ORTHO05D009731 1.1e-15 86.3 78 60.3
Cpa.g.sc66.97 Carica papaya HOM05D007703 ORTHO05D009731 1.1e-15 86.3 77 55.8
SalBow7G3803 Salvia bowleyana HOM05D007703 ORTHO05D009731 1.5e-15 85.9 83 60.2
HPP92_019111 Vanilla planifolia HOM05D007703 ORTHO05D009731 1.5e-15 85.9 54 74.1
BcaC05g26138 Brassica carinata HOM05D007703 ORTHO05D009731 1.9e-15 85.5 74 58.1
C05p21240 Brassica napus HOM05D007703 ORTHO05D009731 1.9e-15 85.5 74 58.1
BolC5t30820H Brassica oleracea HOM05D007703 ORTHO05D009731 1.9e-15 85.5 74 58.1
Lsat_1_v5_gn_9_44720 Lactuca sativa HOM05D007703 ORTHO05D009731 1.9e-15 85.5 78 60.3
Zm00001eb018670 Zea mays HOM05D007703 ORTHO05D009731 2.5e-15 85.1 85 52.9
Ah.05g168540 Amaranthus hybridus HOM05D007703 ORTHO05D009731 3.3e-15 84.7 46 91.3
Medtr5g061840 Medicago truncatula HOM05D007703 ORTHO05D009731 4.3e-15 84.3 74 60.8
TAR628G1160 Trochodendron aralioides HOM05D007703 ORTHO05D009731 4.3e-15 84.3 80 60.0
RcHm_v2.0_Chr2g0097791 Rosa chinensis HOM05D007703 ORTHO05D009731 5.7e-15 84.0 54 72.2
Sp1g19640 Schrenkiella parvula HOM05D007703 ORTHO05D009731 5.7e-15 84.0 74 56.8
BcaB07g32233 Brassica carinata HOM05D007703 ORTHO05D009731 7.4e-15 83.6 75 57.3
BraA09t39737Z Brassica rapa HOM05D007703 ORTHO05D009731 9.7e-15 83.2 72 56.9
Carub.0001s2169 Capsella rubella HOM05D007703 ORTHO05D009731 1.6e-14 82.4 73 60.3
A09p42620 Brassica napus HOM05D007703 ORTHO05D009731 3.7e-14 81.3 72 55.6
CARHR022490 Cardamine hirsuta HOM05D007703 ORTHO05D009731 3.7e-14 81.3 74 56.8
Mapoly0023s0123 Marchantia polymorpha HOM05D007703 ORTHO05D009731 8.2e-14 80.1 56 69.6
PSO133G0107 Papaver somniferum HOM05D007703 ORTHO05D009731 1.1e-13 79.7 59 64.4
AT1G22140 Arabidopsis thaliana HOM05D007703 ORTHO05D009731 1.8e-13 79.0 56 66.1
Pp3c13_8980 Physcomitrium patens HOM05D007703 ORTHO05D009731 6.9e-13 77.0 64 59.4
AL1G35580 Arabidopsis lyrata HOM05D007703 ORTHO05D009731 3.4e-12 74.7 73 54.8
SGA_v2.0_scaffold48G18018 Striga asiatica HOM05D007703 ORTHO05D009731 3.4e-12 74.7 92 50.0
ATR0564G384 Amborella trichopoda HOM05D007703 ORTHO05D009731 1.0e-11 73.2 58 62.1
SEGI_17524 Sequoiadendron giganteum HOM05D007703 ORTHO05D009731 2.2e-11 72.0 81 50.6
ClCG03G008950 Citrullus lanatus HOM05D007703 ORTHO05D009731 1.4e-10 69.3 114 40.4
Haze_00567 Corylus avellana HOM05D007703 ORTHO05D009731 4.6e-09 64.3 113 38.9
CDE10G0176 Ceratophyllum demersum HOM05D007703 ORTHO05D009731 3.9e-08 61.2 40 75.0
CSS0046153 Camellia sinensis var. sinensis HOM05D007703 ORTHO05D009731 7.4e-07 57.0 36 75.0


User provided reference genes

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