Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62034281 Chenopodium quinoa HOM05D005439 ORTHO05D006793 2.3e-81 305.4 151 100.0
EL10Ac4g09544 Beta vulgaris HOM05D005439 ORTHO05D006793 1.3e-50 203.4 140 69.3
AUR62042910 Chenopodium quinoa HOM05D005439 ORTHO05D006793 2.5e-46 189.1 158 61.4
GSVIVG01014379001 Vitis vinifera HOM05D005439 ORTHO05D006793 1.6e-42 176.4 128 65.6
PSO675G4650 Papaver somniferum HOM05D005439 ORTHO05D006793 8.2e-42 174.1 115 70.4
CiPaw.12G120500 Carya illinoinensis HOM05D005439 ORTHO05D006793 1.4e-41 173.3 128 60.9
Aqoxy1G02538 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 1.8e-41 172.9 128 64.1
Manes.15G085800 Manihot esculenta HOM05D005439 ORTHO05D006793 1.8e-41 172.9 120 67.5
TAR624G0176 Trochodendron aralioides HOM05D005439 ORTHO05D006793 3.1e-41 172.2 109 70.6
CANSAT80G2923 Cannabis sativa HOM05D005439 ORTHO05D006793 6.9e-41 171.0 124 64.5
Thecc.07G077600 Theobroma cacao HOM05D005439 ORTHO05D006793 6.9e-41 171.0 124 65.3
Prupe.4G185100 Prunus persica HOM05D005439 ORTHO05D006793 9.0e-41 170.6 151 54.3
Dinv04318 Davidia involucrata HOM05D005439 ORTHO05D006793 1.2e-40 170.2 129 59.7
CiPaw.08G146000 Carya illinoinensis HOM05D005439 ORTHO05D006793 2.6e-40 169.1 128 58.6
TWI15G0142 Tripterygium wilfordii HOM05D005439 ORTHO05D006793 5.9e-40 167.9 130 61.5
Gohir.D11G296600 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.3e-39 166.8 127 63.8
Hund22944 Selenicereus undatus HOM05D005439 ORTHO05D006793 2.9e-39 165.6 135 65.9
Gorai.007G319700 Gossypium raimondii HOM05D005439 ORTHO05D006793 5.0e-39 164.9 127 63.0
CSS0022813 Camellia sinensis var. sinensis HOM05D005439 ORTHO05D006793 6.5e-39 164.5 114 65.8
COL.COLO4_09427 Corchorus olitorius HOM05D005439 ORTHO05D006793 6.5e-39 164.5 121 65.3
TAR626G0706 Trochodendron aralioides HOM05D005439 ORTHO05D006793 6.5e-39 164.5 109 67.0
Gohir.A08G188900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 8.5e-39 164.1 127 63.0
Gohir.D08G040300 Gossypium hirsutum HOM05D005439 ORTHO05D006793 8.5e-39 164.1 127 63.0
Gohir.D10G173200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 8.5e-39 164.1 127 63.0
Potri.011G121800 Populus trichocarpa HOM05D005439 ORTHO05D006793 8.5e-39 164.1 122 63.9
Gohir.D13G039100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.1e-38 163.7 127 63.0
Haze_09469 Corylus avellana HOM05D005439 ORTHO05D006793 1.4e-38 163.3 138 56.5
Duzib170G0676 Durio zibethinus HOM05D005439 ORTHO05D006793 1.9e-38 162.9 123 63.4
Gohir.A05G386100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.5e-38 162.5 127 62.2
Gohir.D11G168400 Gossypium hirsutum HOM05D005439 ORTHO05D006793 2.5e-38 162.5 127 62.2
Rhsim04G0164900 Rhododendron simsii HOM05D005439 ORTHO05D006793 2.5e-38 162.5 127 60.6
Gohir.A11G282786 Gossypium hirsutum HOM05D005439 ORTHO05D006793 4.2e-38 161.8 127 62.2
Cc04_g05330 Coffea canephora HOM05D005439 ORTHO05D006793 5.5e-38 161.4 135 57.8
MD03G1224300 Malus domestica HOM05D005439 ORTHO05D006793 5.5e-38 161.4 110 67.3
Sabra11G0107800 Salix brachista HOM05D005439 ORTHO05D006793 5.5e-38 161.4 126 61.9
DCAR_000742 Daucus carota HOM05D005439 ORTHO05D006793 7.2e-38 161.0 136 57.4
Gohir.A08G058200 Gossypium hirsutum HOM05D005439 ORTHO05D006793 7.2e-38 161.0 127 62.2
Actinidia01110 Actinidia chinensis HOM05D005439 ORTHO05D006793 2.7e-37 159.1 123 60.2
Dinv30229 Davidia involucrata HOM05D005439 ORTHO05D006793 2.7e-37 159.1 125 59.2
Nn1g04026 Nelumbo nucifera HOM05D005439 ORTHO05D006793 2.7e-37 159.1 145 55.2
Lsat_1_v5_gn_9_97261 Lactuca sativa HOM05D005439 ORTHO05D006793 4.6e-37 158.3 117 59.8
Peaxi162Scf00998g00023 Petunia axillaris HOM05D005439 ORTHO05D006793 4.6e-37 158.3 135 54.1
Lsat_1_v5_gn_9_97181 Lactuca sativa HOM05D005439 ORTHO05D006793 7.9e-37 157.5 127 55.9
Aqoxy6G01973 Aquilegia oxysepala HOM05D005439 ORTHO05D006793 1.0e-36 157.1 117 64.1
Glyma.13G278900 Glycine max HOM05D005439 ORTHO05D006793 1.3e-36 156.8 130 56.2
Gohir.A11G204100 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.8e-36 156.4 139 58.3
Psat5g245080 Pisum sativum HOM05D005439 ORTHO05D006793 1.5e-35 153.3 137 53.3
vmacro08610 Vaccinium macrocarpon HOM05D005439 ORTHO05D006793 1.5e-35 153.3 123 59.3
Gorai.013G039600 Gossypium raimondii HOM05D005439 ORTHO05D006793 2.5e-35 152.5 127 59.8
Sc18g0002800 Simmondsia chinensis HOM05D005439 ORTHO05D006793 2.5e-35 152.5 127 61.4
Gorai.010G125600 Gossypium raimondii HOM05D005439 ORTHO05D006793 3.3e-35 152.1 127 60.6
Gorai.013G217100 Gossypium raimondii HOM05D005439 ORTHO05D006793 3.3e-35 152.1 127 59.8
Oeu037221.1 Olea europaea HOM05D005439 ORTHO05D006793 7.4e-35 151.0 125 58.4
Cpa.g.sc53.123 Carica papaya HOM05D005439 ORTHO05D006793 1.3e-34 150.2 122 60.7
Gorai.012G015600 Gossypium raimondii HOM05D005439 ORTHO05D006793 1.6e-34 149.8 127 59.1
Nitab4.5_0003769g0120 Nicotiana tabacum HOM05D005439 ORTHO05D006793 1.6e-34 149.8 123 54.5
CAN.G162.72 Capsicum annuum HOM05D005439 ORTHO05D006793 2.2e-34 149.4 124 54.8
HanXRQChr04g0095481 Helianthus annuus HOM05D005439 ORTHO05D006793 2.2e-34 149.4 117 59.0
Medtr2g079590 Medicago truncatula HOM05D005439 ORTHO05D006793 3.7e-34 148.7 121 59.5
PGSC0003DMG400001562 Solanum tuberosum HOM05D005439 ORTHO05D006793 4.8e-34 148.3 121 56.2
RcHm_v2.0_Chr5g0034441 Rosa chinensis HOM05D005439 ORTHO05D006793 1.8e-33 146.4 121 57.0
Lalb_Chr20g0109751 Lupinus albus HOM05D005439 ORTHO05D006793 3.1e-33 145.6 119 57.1
Sopen07g031460 Solanum pennellii HOM05D005439 ORTHO05D006793 4.1e-33 145.2 121 56.2
Gohir.A03G006900 Gossypium hirsutum HOM05D005439 ORTHO05D006793 1.5e-32 143.3 104 64.4
RcHm_v2.0_Chr6g0279991 Rosa chinensis HOM05D005439 ORTHO05D006793 1.5e-32 143.3 116 59.5
ECA240G1812 Erigeron canadensis HOM05D005439 ORTHO05D006793 2.0e-32 142.9 122 52.5
PGSC0003DMG400012454 Solanum tuberosum HOM05D005439 ORTHO05D006793 5.9e-32 141.4 121 54.5
TPR.G16054 Trifolium pratense HOM05D005439 ORTHO05D006793 5.9e-32 141.4 126 54.8
PSO541G3703 Papaver somniferum HOM05D005439 ORTHO05D006793 1.0e-31 140.6 87 73.6
FAN14G2189 Fragaria x ananassa HOM05D005439 ORTHO05D006793 1.7e-31 139.8 131 51.9
Eucgr.I00444 Eucalyptus grandis HOM05D005439 ORTHO05D006793 2.2e-31 139.4 127 54.3
Lj1g0010486 Lotus japonicus HOM05D005439 ORTHO05D006793 6.5e-31 137.9 130 51.5
Solyc07g063290.3 Solanum lycopersicum HOM05D005439 ORTHO05D006793 3.2e-30 135.6 121 55.4
Lj3g0027158 Lotus japonicus HOM05D005439 ORTHO05D006793 4.2e-30 135.2 127 51.2
arahy.Tifrunner.gnm1.ann1.5K0R4Y Arachis hypogaea HOM05D005439 ORTHO05D006793 4.6e-29 131.7 150 46.0
Ciclev10009838m.g Citrus clementina HOM05D005439 ORTHO05D006793 1.8e-28 129.8 94 61.7
ClCG11G007090 Citrullus lanatus HOM05D005439 ORTHO05D006793 8.8e-28 127.5 125 53.6
MBI18_g17006_MAGBIO Magnolia biondii HOM05D005439 ORTHO05D006793 1.1e-27 127.1 133 50.4
ATR0019G055 Amborella trichopoda HOM05D005439 ORTHO05D006793 4.4e-27 125.2 123 52.8
Atru.chr2.2728 Acer truncatum HOM05D005439 ORTHO05D006793 2.4e-25 119.4 127 49.6
Atru.chr2.2729 Acer truncatum HOM05D005439 ORTHO05D006793 2.4e-25 119.4 127 49.6
Gohir.D09G236700 Gossypium hirsutum HOM05D005439 ORTHO05D006793 3.1e-25 119.0 94 60.6
AUR62029363 Chenopodium quinoa HOM05D005439 ORTHO05D006793 1.5e-24 116.7 61 90.2
MELO3C008192.2 Cucumis melo HOM05D005439 ORTHO05D006793 1.5e-24 116.7 122 51.6
HPP92_001754 Vanilla planifolia HOM05D005439 ORTHO05D006793 2.0e-24 116.3 110 52.7
Sed0007807 Sechium edule HOM05D005439 ORTHO05D006793 3.4e-24 115.5 117 52.1
MD11G1243100 Malus domestica HOM05D005439 ORTHO05D006793 3.8e-23 112.1 115 48.7
Migut.H01926 Erythranthe guttata HOM05D005439 ORTHO05D006793 6.5e-23 111.3 124 46.8
Phvul.005G083100 Phaseolus vulgaris HOM05D005439 ORTHO05D006793 1.1e-22 110.5 128 43.0
Potri.001G402700 Populus trichocarpa HOM05D005439 ORTHO05D006793 1.1e-22 110.5 93 55.9
PGR031G3442 Punica granatum HOM05D005439 ORTHO05D006793 1.1e-22 110.5 117 52.1
Gorai.007G117500 Gossypium raimondii HOM05D005439 ORTHO05D006793 2.5e-22 109.4 94 58.5
Nitab4.5_0010521g0020 Nicotiana tabacum HOM05D005439 ORTHO05D006793 3.2e-22 109.0 123 44.7
THA.LOC104815550 Tarenaya hassleriana HOM05D005439 ORTHO05D006793 4.2e-22 108.6 118 48.3
CARHR090470 Cardamine hirsuta HOM05D005439 ORTHO05D006793 5.5e-22 108.2 123 47.2
QL08p019954 Quercus lobata HOM05D005439 ORTHO05D006793 5.5e-22 108.2 72 66.7
BraA02t05327Z Brassica rapa HOM05D005439 ORTHO05D006793 1.2e-21 107.1 121 48.8
BcaB08g36849 Brassica carinata HOM05D005439 ORTHO05D006793 1.6e-21 106.7 110 49.1
C09p60700 Brassica napus HOM05D005439 ORTHO05D006793 3.6e-21 105.5 125 47.2
A02p03560 Brassica napus HOM05D005439 ORTHO05D006793 4.7e-21 105.1 125 45.6
BolC2t06755H Brassica oleracea HOM05D005439 ORTHO05D006793 6.1e-21 104.8 115 51.3
Sp6g27700 Schrenkiella parvula HOM05D005439 ORTHO05D006793 3.9e-20 102.1 124 44.4
C02p08370 Brassica napus HOM05D005439 ORTHO05D006793 5.2e-20 101.7 115 50.4
Carub.0003s1515 Capsella rubella HOM05D005439 ORTHO05D006793 8.8e-20 100.9 128 46.1
unitig_32.g11156 Utricularia gibba HOM05D005439 ORTHO05D006793 8.8e-20 100.9 114 44.7
AL3G27970 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 1.5e-19 100.1 118 45.8
Eucgr.L03232 Eucalyptus grandis HOM05D005439 ORTHO05D006793 1.5e-19 100.1 87 54.0
Zm00001eb001470 Zea mays HOM05D005439 ORTHO05D006793 1.5e-19 100.1 121 46.3
AT3G15420 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 4.4e-19 98.6 123 45.5
Os04g0530000 Oryza sativa ssp. japonica HOM05D005439 ORTHO05D006793 7.4e-19 97.8 129 44.2
Aa31LG8G2660 Aethionema arabicum HOM05D005439 ORTHO05D006793 9.7e-19 97.4 120 44.2
Thhalv10021755m.g Eutrema salsugineum HOM05D005439 ORTHO05D006793 1.7e-18 96.7 122 47.5
RcHm_v2.0_Chr2g0143371 Rosa chinensis HOM05D005439 ORTHO05D006793 3.7e-18 95.5 86 54.7
AL2G40660 Arabidopsis lyrata HOM05D005439 ORTHO05D006793 4.8e-18 95.1 117 47.0
SalBow7G3564 Salvia bowleyana HOM05D005439 ORTHO05D006793 4.8e-18 95.1 131 42.7
AT1G80745 Arabidopsis thaliana HOM05D005439 ORTHO05D006793 8.2e-18 94.4 123 43.9
Zm00001eb403870 Zea mays HOM05D005439 ORTHO05D006793 4.1e-17 92.0 124 41.1
arahy.Tifrunner.gnm1.ann1.KJ06EE Arachis hypogaea HOM05D005439 ORTHO05D006793 1.2e-16 90.5 65 64.6
Mapoly0076s0011 Marchantia polymorpha HOM05D005439 ORTHO05D006793 1.2e-16 90.5 123 39.0
TPR.G39010 Trifolium pratense HOM05D005439 ORTHO05D006793 1.6e-16 90.1 70 55.7
CDE08G1297 Ceratophyllum demersum HOM05D005439 ORTHO05D006793 4.5e-16 88.6 73 54.8
Sed0010430 Sechium edule HOM05D005439 ORTHO05D006793 4.5e-16 88.6 92 48.9
VMungo1215G1396 Vigna mungo HOM05D005439 ORTHO05D006793 7.7e-16 87.8 101 43.6
Gorai.004G187000 Gossypium raimondii HOM05D005439 ORTHO05D006793 6.5e-15 84.7 61 68.9
AagrBONN_evm.TU.Sc2ySwM_369.384 Anthoceros agrestis HOM05D005439 ORTHO05D006793 1.6e-13 80.1 112 42.9
Carub.0002s2680 Capsella rubella HOM05D005439 ORTHO05D006793 1.8e-12 76.6 61 55.7
BcaC03g18493 Brassica carinata HOM05D005439 ORTHO05D006793 3.0e-12 75.9 87 49.4
Pp3c23_5480 Physcomitrium patens HOM05D005439 ORTHO05D006793 3.7e-10 68.9 108 38.0
BolC9t58901H Brassica oleracea HOM05D005439 ORTHO05D006793 3.1e-09 65.9 89 43.8
BcaC04g18875 Brassica carinata HOM05D005439 ORTHO05D006793 4.1e-09 65.5 89 43.8
RcHm_v2.0_Chr5g0034431 Rosa chinensis HOM05D005439 ORTHO05D006793 1.6e-08 63.5 49 59.2
QL08p019959 Quercus lobata HOM05D005439 ORTHO05D006793 2.7e-08 62.8 56 51.8
FAN09G1944 Fragaria x ananassa HOM05D005439 ORTHO05D006793 5.0e-07 58.5 57 49.1
CsaV3_2G034140 Cucumis sativus L. HOM05D003646 ORTHO05D004503 1.5e-06 57.0 56 53.6
FAN02G1859 Fragaria x ananassa HOM05D005439 ORTHO05D006793 2.5e-06 56.2 57 47.4
FAN09G3549 Fragaria x ananassa HOM05D005439 ORTHO05D006793 9.4e-06 54.3 70 38.6
SGA_v2.0_scaffold4G02008 Striga asiatica HOM05D000346 ORTHO05D000326 9.4e-06 54.3 54 42.6


User provided reference genes

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