Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 2.5e-195 685.3 344 100.0
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 3.7e-183 644.8 343 94.5
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 9.3e-142 507.3 301 83.4
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 4.2e-134 481.9 342 70.8
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 5.6e-131 471.5 347 68.9
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 1.5e-123 446.8 288 74.3
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 2.6e-120 436.0 309 68.9
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 3.4e-120 435.6 330 66.1
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 4.5e-120 435.3 290 71.0
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 4.5e-120 435.3 323 65.6
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 1.3e-119 433.7 311 67.5
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 1.7e-119 433.3 290 72.1
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 1.7e-119 433.3 312 67.9
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 2.2e-119 433.0 350 62.6
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 3.8e-119 432.2 345 61.7
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 6.5e-119 431.4 311 66.9
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 6.5e-119 431.4 299 70.6
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 8.4e-119 431.0 292 70.5
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 8.4e-119 431.0 294 69.7
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 1.9e-118 429.9 304 68.8
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 2.5e-118 429.5 343 63.3
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 2.5e-118 429.5 296 71.3
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 3.2e-118 429.1 350 62.0
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 3.2e-118 429.1 307 67.8
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 5.5e-118 428.3 350 61.7
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 5.5e-118 428.3 323 65.0
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 1.2e-117 427.2 337 63.5
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 2.1e-117 426.4 337 63.2
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 3.5e-117 425.6 306 69.0
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 1.8e-116 423.3 328 65.9
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 3.0e-116 422.5 327 62.7
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 6.7e-116 421.4 342 61.1
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 1.1e-115 420.6 292 68.8
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 1.5e-115 420.2 337 62.6
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 1.9e-115 419.9 314 65.0
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 5.7e-115 418.3 291 68.7
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 5.7e-115 418.3 288 68.8
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 7.4e-115 417.9 298 68.8
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 1.3e-114 417.2 321 64.8
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 2.2e-114 416.4 341 63.0
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 2.2e-114 416.4 286 67.8
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 3.7e-114 415.6 287 70.4
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 1.1e-113 414.1 345 60.6
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 1.8e-113 413.3 316 63.0
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 2.4e-113 412.9 306 66.7
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 3.1e-113 412.5 273 72.5
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 4.1e-113 412.1 315 64.8
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 4.1e-113 412.1 290 67.9
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 4.1e-113 412.1 340 60.6
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 5.3e-113 411.8 292 69.9
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 6.9e-113 411.4 293 66.9
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 9.0e-113 411.0 287 69.7
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 1.5e-112 410.2 330 62.7
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 3.4e-112 409.1 290 68.3
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 3.4e-112 409.1 294 66.7
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 3.4e-112 409.1 295 67.1
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 3.4e-112 409.1 286 67.5
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 5.9e-112 408.3 338 63.0
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 5.9e-112 408.3 291 67.0
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 7.7e-112 407.9 294 67.7
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 7.7e-112 407.9 290 67.9
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 1.0e-111 407.5 279 70.6
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 1.0e-111 407.5 295 65.8
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 1.3e-111 407.1 272 72.4
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 1.7e-111 406.8 344 61.3
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 1.7e-111 406.8 332 60.8
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 5.0e-111 405.2 342 60.5
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 8.5e-111 404.4 327 61.2
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 1.4e-110 403.7 295 66.8
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 1.2e-109 400.6 296 64.9
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 1.0e-108 397.5 309 62.8
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 3.0e-108 396.0 365 57.8
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 5.1e-108 395.2 278 69.4
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 4.3e-107 392.1 348 59.5
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 1.7e-106 390.2 330 61.5
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 6.3e-106 388.3 340 56.5
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 3.1e-105 386.0 312 61.2
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 1.2e-104 384.0 315 60.6
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 5.9e-104 381.7 289 63.7
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 1.3e-103 380.6 290 65.5
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 1.1e-102 377.5 336 57.1
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 6.7e-100 368.2 272 67.6
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 4.4e-99 365.5 266 66.2
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 1.8e-97 360.1 298 62.1
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 2.6e-96 356.3 310 60.0
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 2.7e-93 346.3 288 58.0
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 1.8e-92 343.6 264 62.1
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.1e-91 340.9 275 62.2
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.7e-91 338.6 283 60.1
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 4.1e-89 332.4 217 72.4
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 8.5e-87 324.7 300 56.7
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 5.5e-86 322.0 310 55.2
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.7e-83 312.0 271 58.7
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 8.3e-82 308.1 393 43.5
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 2.7e-77 293.1 201 69.2
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 2.9e-71 273.1 268 55.2
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.7e-66 257.3 236 57.6
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 7.5e-59 231.9 156 70.5
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 1.1e-57 228.0 253 49.0
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 3.9e-55 219.5 145 71.7
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 2.8e-53 213.4 154 65.6
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.9e-49 200.7 142 65.5
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 1.8e-44 184.1 158 57.6
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 6.4e-42 175.6 253 42.7
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 1.6e-40 171.0 107 72.0
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 7.8e-40 168.7 105 77.1
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 7.6e-35 152.1 183 47.0
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 9.9e-35 151.8 183 47.0
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 7.8e-32 142.1 89 74.2
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 2.8e-29 133.7 99 67.7
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 5.3e-28 129.4 82 74.4
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 4.8e-21 106.3 66 72.7
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 2.6e-19 100.5 144 43.1
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 1.1e-17 95.1 70 65.7
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 4.2e-17 93.2 78 62.8
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 1.7e-10 71.2 60 56.7
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.5e-10 69.3 56 58.9
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 1.1e-09 68.6 50 58.0
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 1.4e-09 68.2 45 73.3
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 1.2e-08 65.1 81 40.7


User provided reference genes

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