Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 2.4e-304 1048.1 565 100.0
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 1.3e-286 989.2 568 92.1
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 4.2e-200 701.8 584 67.0
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 6.6e-145 518.5 599 55.3
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 1.5e-128 464.2 577 52.2
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 8.5e-100 368.6 697 40.3
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 1.2e-61 241.9 596 37.4
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 6.5e-60 236.1 652 37.4
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 2.5e-59 234.2 593 37.3
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 8.9e-57 225.7 587 36.3
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 9.8e-56 222.2 608 37.0
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 3.7e-55 220.3 605 35.0
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 2.4e-54 217.6 591 38.1
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 1.2e-53 215.3 437 41.0
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 2.5e-51 207.6 351 43.0
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 7.3e-51 206.1 601 35.3
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 1.2e-50 205.3 587 35.4
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 1.2e-48 198.7 349 42.7
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 4.4e-48 196.8 553 36.7
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 5.8e-48 196.4 506 36.8
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 2.9e-47 194.1 598 35.6
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 1.1e-46 192.2 603 35.0
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 1.1e-46 192.2 565 34.5
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 2.0e-45 188.0 516 35.9
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 7.8e-45 186.0 598 33.9
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 2.3e-44 184.5 636 32.4
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 5.0e-44 183.3 603 36.0
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 6.6e-44 183.0 570 34.9
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 1.5e-43 181.8 440 38.2
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 1.9e-43 181.4 570 36.5
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 3.3e-43 180.6 597 33.7
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 9.5e-43 179.1 598 33.4
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 9.5e-43 179.1 656 31.9
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 1.2e-42 178.7 486 35.4
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 1.6e-42 178.3 664 31.6
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 2.8e-42 177.6 287 42.9
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 6.2e-42 176.4 531 33.9
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 8.0e-42 176.0 601 34.6
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 1.4e-41 175.3 445 37.1
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 1.8e-41 174.9 442 36.9
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 2.3e-41 174.5 517 34.8
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 3.1e-41 174.1 601 33.3
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 3.1e-41 174.1 582 32.8
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 4.0e-41 173.7 442 36.9
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 6.8e-41 172.9 387 36.2
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 1.2e-40 172.2 403 37.0
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.5e-40 171.8 600 33.7
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 2.0e-40 171.4 398 35.9
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 2.0e-40 171.4 457 35.9
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 2.6e-40 171.0 273 48.4
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 4.4e-40 170.2 626 33.2
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 5.8e-40 169.9 594 33.0
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 2.2e-39 167.9 497 34.0
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 2.9e-39 167.5 427 35.4
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 4.9e-39 166.8 582 34.7
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 8.3e-39 166.0 528 34.5
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 1.1e-38 165.6 558 34.9
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 1.9e-38 164.9 529 33.6
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 5.4e-38 163.3 274 47.1
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 9.2e-38 162.5 258 41.9
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 2.1e-37 161.4 246 43.9
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 6.0e-37 159.8 469 33.3
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.3e-36 157.9 621 32.9
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 8.6e-36 156.0 486 34.0
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 1.1e-35 155.6 617 32.7
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 1.1e-35 155.6 505 34.7
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 1.5e-35 155.2 564 33.0
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 1.5e-35 155.2 480 34.8
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 2.5e-35 154.5 432 34.7
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 2.5e-35 154.5 415 34.9
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 4.3e-35 153.7 589 32.9
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 5.6e-35 153.3 498 34.1
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.1e-34 151.4 620 33.2
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 3.6e-34 150.6 448 33.7
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 4.7e-34 150.2 308 36.4
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 1.4e-33 148.7 430 33.0
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 1.8e-33 148.3 522 32.4
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 3.1e-33 147.5 605 30.7
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 3.1e-33 147.5 556 31.7
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 3.4e-32 144.1 617 35.2
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 3.4e-32 144.1 443 36.6
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 5.8e-32 143.3 556 32.2
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 2.9e-31 141.0 677 27.6
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 8.3e-31 139.4 614 31.6
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 3.2e-30 137.5 538 32.7
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 3.2e-30 137.5 454 32.2
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 3.2e-30 137.5 615 32.2
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 3.2e-30 137.5 298 34.6
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 3.5e-29 134.0 638 31.7
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 4.6e-29 133.7 443 31.4
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 6.6e-28 129.8 462 32.7
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 1.5e-27 128.6 536 30.8
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 1.2e-26 125.6 285 35.8
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 7.6e-24 116.3 602 31.4
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 1.7e-23 115.2 603 28.4
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 2.4e-22 111.3 630 30.5
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 5.4e-22 110.2 579 29.7
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 1.1e-19 102.4 200 37.0
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 2.6e-16 91.3 622 28.0
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 3.5e-13 80.9 260 28.1
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 1.3e-12 79.0 346 27.2
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 2.5e-11 74.7 344 29.4
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 1.8e-09 68.6 533 25.9
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 1.5e-08 65.5 303 24.8
Peaxi162Scf00558g00016 Petunia axillaris HOM05D006718 ORTHO05D008492 3.8e-07 60.8 184 27.2


User provided reference genes

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