Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62034018 Chenopodium quinoa HOM05D006302 ORTHO05D007960 0.0e+00 1877.8 951 100.0
EL10Ac8g19491 Beta vulgaris HOM05D006302 ORTHO05D007960 0.0e+00 1254.6 960 69.3
TWI81G1078 Tripterygium wilfordii HOM05D006302 ORTHO05D007960 4.2e-285 984.9 975 55.2
TAR629G0371 Trochodendron aralioides HOM05D006302 ORTHO05D007960 6.9e-280 967.6 970 55.5
FAN13G0246 Fragaria x ananassa HOM05D006302 ORTHO05D007960 2.6e-279 965.7 984 54.3
RcHm_v2.0_Chr7g0177661 Rosa chinensis HOM05D006302 ORTHO05D007960 2.2e-278 962.6 982 54.2
Dinv19314 Davidia involucrata HOM05D006302 ORTHO05D007960 3.2e-277 958.7 949 56.5
Glyma.16G219200 Glycine max HOM05D006302 ORTHO05D007960 7.9e-276 954.1 989 53.7
Nn4g24592 Nelumbo nucifera HOM05D006302 ORTHO05D007960 1.8e-275 953.0 950 55.8
Lalb_Chr14g0370421 Lupinus albus HOM05D006302 ORTHO05D007960 3.9e-275 951.8 982 54.0
GSVIVG01012939001 Vitis vinifera HOM05D006302 ORTHO05D007960 1.1e-274 950.3 957 54.8
FvH4_5g17940 Fragaria vesca HOM05D006302 ORTHO05D007960 1.5e-274 949.9 977 54.1
MD14G1242200 Malus domestica HOM05D006302 ORTHO05D007960 3.3e-274 948.7 980 54.7
PGR083G1118 Punica granatum HOM05D006302 ORTHO05D007960 4.4e-274 948.3 963 55.1
CiPaw.15G150000 Carya illinoinensis HOM05D006302 ORTHO05D007960 5.7e-274 948.0 970 54.8
FAN08G1906 Fragaria x ananassa HOM05D006302 ORTHO05D007960 7.4e-274 947.6 974 53.6
FAN18G4444 Fragaria x ananassa HOM05D006302 ORTHO05D007960 1.7e-273 946.4 985 53.9
FAN04G1871 Fragaria x ananassa HOM05D006302 ORTHO05D007960 2.8e-273 945.7 961 54.7
Phvul.004G145200 Phaseolus vulgaris HOM05D006302 ORTHO05D007960 2.8e-273 945.7 985 53.5
Prupe.5G239800 Prunus persica HOM05D006302 ORTHO05D007960 1.1e-272 943.7 978 54.7
Lj2g0026336 Lotus japonicus HOM05D006302 ORTHO05D007960 2.6e-271 939.1 990 53.4
Ca_23670_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 1.3e-270 936.8 970 53.5
Medtr4g016590 Medicago truncatula HOM05D006302 ORTHO05D007960 5.0e-270 934.9 966 53.2
Eucgr.H00592 Eucalyptus grandis HOM05D006302 ORTHO05D007960 9.4e-269 930.6 980 53.0
Actinidia34644 Actinidia chinensis HOM05D006302 ORTHO05D007960 4.7e-268 928.3 977 52.7
CSS0040809 Camellia sinensis var. sinensis HOM05D006302 ORTHO05D007960 6.1e-268 927.9 840 58.9
TPR.G28992 Trifolium pratense HOM05D006302 ORTHO05D007960 1.8e-267 926.4 971 52.2
Sopen03g028860 Solanum pennellii HOM05D006302 ORTHO05D007960 2.0e-266 922.9 989 51.2
Solyc03g098160.3 Solanum lycopersicum HOM05D006302 ORTHO05D007960 1.7e-265 919.8 989 51.3
VMungo0464G0980 Vigna mungo HOM05D006302 ORTHO05D007960 2.2e-265 919.5 984 52.5
CAN.G637.21 Capsicum annuum HOM05D006302 ORTHO05D007960 2.8e-265 919.1 989 51.4
arahy.Tifrunner.gnm1.ann1.2W4JQ8 Arachis hypogaea HOM05D006302 ORTHO05D007960 4.8e-265 918.3 993 52.1
Psat1g124600 Pisum sativum HOM05D006302 ORTHO05D007960 1.4e-264 916.8 968 52.0
Rhsim09G0028600 Rhododendron simsii HOM05D006302 ORTHO05D007960 3.1e-264 915.6 978 53.2
Ciclev10018592m.g Citrus clementina HOM05D006302 ORTHO05D007960 2.0e-263 912.9 949 52.3
Potri.015G033300 Populus trichocarpa HOM05D006302 ORTHO05D007960 5.9e-263 911.4 945 51.6
Manes.06G000900 Manihot esculenta HOM05D006302 ORTHO05D007960 1.0e-262 910.6 982 52.6
arahy.Tifrunner.gnm1.ann1.YU9TRY Arachis hypogaea HOM05D006302 ORTHO05D007960 2.9e-262 909.1 1022 50.8
Cc04_g09070 Coffea canephora HOM05D006302 ORTHO05D007960 3.6e-260 902.1 968 51.2
Haze_18958 Corylus avellana HOM05D006302 ORTHO05D007960 4.7e-260 901.7 1050 50.5
CSS0030577 Camellia sinensis var. sinensis HOM05D006302 ORTHO05D007960 1.8e-259 899.8 841 58.5
ClCG01G014910 Citrullus lanatus HOM05D006302 ORTHO05D007960 9.7e-258 894.0 983 51.7
MSTRG.23195 Avicennia marina HOM05D006302 ORTHO05D007960 1.3e-257 893.6 970 51.2
Gohir.D02G118900 Gossypium hirsutum HOM05D006302 ORTHO05D007960 8.2e-257 891.0 966 52.1
Lj9C414G14 Lonicera japonica HOM05D006302 ORTHO05D007960 8.2e-257 891.0 801 58.8
Nitab4.5_0005200g0040 Nicotiana tabacum HOM05D006302 ORTHO05D007960 1.1e-256 890.6 975 51.1
Gorai.005G134900 Gossypium raimondii HOM05D006302 ORTHO05D007960 7.0e-256 887.9 966 51.8
PSO063G0294 Papaver somniferum HOM05D006302 ORTHO05D007960 2.0e-255 886.3 965 52.6
Duzib084G0934 Durio zibethinus HOM05D006302 ORTHO05D007960 2.7e-255 885.9 948 51.9
Sabra15G0027400 Salix brachista HOM05D006302 ORTHO05D007960 2.7e-255 885.9 1018 48.3
MELO3C002158.2 Cucumis melo HOM05D006302 ORTHO05D007960 1.0e-254 884.0 979 51.4
CsaV3_1G007420 Cucumis sativus L. HOM05D006302 ORTHO05D007960 1.7e-254 883.2 980 51.2
Gohir.A03G090800 Gossypium hirsutum HOM05D006302 ORTHO05D007960 2.9e-254 882.5 966 51.9
Thecc.03G067700 Theobroma cacao HOM05D006302 ORTHO05D007960 2.9e-254 882.5 934 51.4
Atru.chr9.205 Acer truncatum HOM05D006302 ORTHO05D007960 3.8e-254 882.1 963 52.5
SalBow5G5149 Salvia bowleyana HOM05D006302 ORTHO05D007960 3.2e-253 879.0 929 50.8
Sed0020457 Sechium edule HOM05D006302 ORTHO05D007960 3.6e-252 875.5 984 51.0
Migut.O00235 Erythranthe guttata HOM05D006302 ORTHO05D007960 6.1e-252 874.8 965 50.3
vmacro22676 Vaccinium macrocarpon HOM05D006302 ORTHO05D007960 8.0e-252 874.4 1040 49.5
DCAR_010206 Daucus carota HOM05D006302 ORTHO05D007960 8.8e-251 870.9 971 52.1
SalBow5G5312 Salvia bowleyana HOM05D006302 ORTHO05D007960 4.4e-250 868.6 940 50.1
Nitab4.5_0001180g0010 Nicotiana tabacum HOM05D006302 ORTHO05D007960 1.6e-247 860.1 969 49.8
HanXRQChr01g0002621 Helianthus annuus HOM05D006302 ORTHO05D007960 1.3e-246 857.1 971 50.5
Aa31LG8G4630 Aethionema arabicum HOM05D006302 ORTHO05D007960 7.2e-245 851.3 982 48.9
Sp3g15860 Schrenkiella parvula HOM05D006302 ORTHO05D007960 6.1e-244 848.2 959 50.3
Lsat_1_v5_gn_2_15380 Lactuca sativa HOM05D006302 ORTHO05D007960 5.2e-243 845.1 965 49.6
THA.LOC104821822 Tarenaya hassleriana HOM05D006302 ORTHO05D007960 2.0e-242 843.2 954 49.9
C05p48650 Brassica napus HOM05D006302 ORTHO05D007960 3.4e-242 842.4 961 50.1
BolC5t33600H Brassica oleracea HOM05D006302 ORTHO05D007960 3.4e-242 842.4 961 50.1
Oeu060652.1 Olea europaea HOM05D006302 ORTHO05D007960 4.4e-242 842.0 955 49.3
AL3G30880 Arabidopsis lyrata HOM05D006302 ORTHO05D007960 1.7e-241 840.1 948 49.8
SGA_v2.0_scaffold90G27777 Striga asiatica HOM05D006302 ORTHO05D007960 2.8e-241 839.3 1007 48.1
Thhalv10019937m.g Eutrema salsugineum HOM05D006302 ORTHO05D007960 1.8e-240 836.6 962 49.7
AT3G17740 Arabidopsis thaliana HOM05D006302 ORTHO05D007960 9.2e-240 834.3 956 49.7
Peaxi162Scf00171g00631 Petunia axillaris HOM05D006302 ORTHO05D007960 1.0e-238 830.9 982 49.5
ECA238G1211 Erigeron canadensis HOM05D006302 ORTHO05D007960 1.9e-237 826.6 836 52.6
Carub.0003s1747 Capsella rubella HOM05D006302 ORTHO05D007960 1.4e-235 820.5 949 49.7
BcaC05g28760 Brassica carinata HOM05D006302 ORTHO05D007960 4.6e-231 805.4 957 48.9
A05p32110 Brassica napus HOM05D006302 ORTHO05D007960 3.1e-227 792.7 812 53.2
CDE07G1110 Ceratophyllum demersum HOM05D006302 ORTHO05D007960 8.9e-227 791.2 955 48.0
ATR0598G116 Amborella trichopoda HOM05D006302 ORTHO05D007960 2.4e-224 783.1 917 48.9
BraA05t22040Z Brassica rapa HOM05D006302 ORTHO05D007960 5.6e-213 745.3 958 46.9
SHI19119 Sapria himalayana HOM05D006302 ORTHO05D007960 1.2e-212 744.2 1049 43.2
Zm00001eb256430 Zea mays HOM05D006302 ORTHO05D007960 5.2e-211 738.8 951 45.4
Ca_26696_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 1.5e-210 737.3 836 51.0
Os02g0772500 Oryza sativa ssp. japonica HOM05D006302 ORTHO05D007960 9.9e-210 734.6 939 45.5
QL10p033145 Quercus lobata HOM05D006302 ORTHO05D007960 1.4e-208 730.7 1444 36.6
HPP92_002770 Vanilla planifolia HOM05D006302 ORTHO05D007960 2.1e-199 700.3 966 44.9
SEGI_33145 Sequoiadendron giganteum HOM05D006302 ORTHO05D007960 2.5e-189 666.8 996 42.3
Ca_22760_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 1.4e-184 651.0 669 53.8
Ca_05032_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 2.4e-184 650.2 661 54.0
Sc10g0008940 Simmondsia chinensis HOM05D006302 ORTHO05D007960 1.9e-181 640.6 519 61.7
AT3G17712 Arabidopsis thaliana HOM05D006302 ORTHO05D007960 1.8e-179 634.0 766 48.3
unitig_22.g5442 Utricularia gibba HOM05D006302 ORTHO05D007960 2.6e-178 630.2 938 40.7
COL.COLO4_09239 Corchorus olitorius HOM05D006302 ORTHO05D007960 8.8e-158 562.0 664 47.9
Cpa.g.sc7.123 Carica papaya HOM05D006302 ORTHO05D007960 1.4e-147 528.1 508 54.5
CARHR093080 Cardamine hirsuta HOM05D006302 ORTHO05D007960 3.8e-145 520.0 543 51.9
AagrBONN_evm.TU.Sc2ySwM_362.1719 Anthoceros agrestis HOM05D006302 ORTHO05D007960 8.5e-145 518.8 852 38.0
Mapoly0172s0015 Marchantia polymorpha HOM05D006302 ORTHO05D007960 6.7e-142 509.2 779 39.0
SMO340G0100 Selaginella moellendorffii HOM05D006302 ORTHO05D007960 1.7e-137 494.6 811 37.0
Pp3c9_1610 Physcomitrium patens HOM05D006302 ORTHO05D007960 1.8e-123 448.0 885 35.7
Pp3c9_1614 Physcomitrium patens HOM05D006302 ORTHO05D007960 1.8e-123 448.0 885 35.7
Sc10g0008950 Simmondsia chinensis HOM05D006302 ORTHO05D007960 8.9e-118 429.1 401 58.6
Glyma.09G169600 Glycine max HOM05D006302 ORTHO05D007960 9.2e-115 419.1 439 51.3
C05p48600 Brassica napus HOM05D006302 ORTHO05D007960 4.3e-104 383.6 437 51.5
CBR_g4862 Chara braunii HOM05D006302 ORTHO05D007960 6.0e-90 336.7 1046 27.7
Cpa.g.sc7.122 Carica papaya HOM05D006302 ORTHO05D007960 6.3e-31 140.6 112 56.2
Cre13.g589650 Chlamydomonas reinhardtii HOM05D006302 ORTHO05D007960 3.4e-24 118.2 514 24.1
CAN.G852.1 Capsicum annuum HOM05D006302 ORTHO05D007960 4.2e-11 74.7 84 41.7
Lsat_1_v5_gn_0_6420 Lactuca sativa HOM05D002112 ORTHO05D007960 8.0e-10 70.5 70 48.6
COL.COLO4_09240 Corchorus olitorius HOM05D006302 ORTHO05D007960 1.0e-09 70.1 40 77.5
Actinidia04194 Actinidia chinensis HOM05D006302 ORTHO05D007960 8.9e-09 67.0 69 50.7
Cpa.g.c41962 Carica papaya HOM05D006302 ORTHO05D007960 7.5e-08 63.9 37 78.4
Lsat_1_v5_gn_5_105340 Lactuca sativa HOM05D006302 ORTHO05D007960 3.2e-06 58.5 66 43.9
SGA_v2.0_scaffold100G29654 Striga asiatica HOM05D006302 ORTHO05D007960 3.2e-06 58.5 35 77.1


User provided reference genes

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