Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 1.9e-220 768.8 375 100.0
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 4.0e-191 671.4 375 89.6
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 2.9e-181 638.6 366 83.1
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 6.7e-154 547.7 379 69.4
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 4.4e-153 545.0 373 69.2
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 1.6e-150 536.6 375 66.4
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 4.5e-150 535.0 373 67.0
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 7.7e-150 534.3 374 67.1
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 7.7e-150 534.3 374 67.1
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 2.9e-149 532.3 376 70.2
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 5.5e-148 528.1 374 66.0
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 9.4e-148 527.3 374 66.3
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 2.1e-147 526.2 374 65.8
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 3.6e-147 525.4 373 65.4
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 1.0e-146 523.9 374 66.0
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 2.8e-144 515.8 376 66.0
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 4.8e-144 515.0 375 63.5
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.4e-143 513.5 375 64.3
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 1.8e-143 513.1 375 64.3
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 2.4e-143 512.7 376 63.3
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 3.1e-143 512.3 376 63.8
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 4.1e-143 511.9 375 64.3
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 4.1e-143 511.9 377 63.9
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 4.1e-143 511.9 376 64.9
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 1.2e-142 510.4 370 66.2
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 1.6e-142 510.0 374 63.6
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 2.7e-142 509.2 377 63.1
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 5.9e-142 508.1 380 63.7
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 7.7e-142 507.7 373 63.3
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 1.3e-141 506.9 375 63.2
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.7e-141 506.5 374 63.9
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 6.6e-141 504.6 373 64.6
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 1.1e-140 503.8 393 62.1
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 1.1e-140 503.8 375 63.2
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 1.9e-140 503.1 368 65.5
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 1.9e-140 503.1 375 63.5
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 4.2e-140 501.9 374 63.1
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 9.5e-140 500.7 372 62.1
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 4.7e-139 498.4 369 63.1
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 6.1e-139 498.0 374 63.4
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 1.8e-138 496.5 372 63.4
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 4.0e-138 495.4 369 62.9
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 8.9e-138 494.2 374 64.4
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 1.5e-137 493.4 368 63.3
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 3.4e-137 492.3 375 62.7
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 3.4e-137 492.3 375 62.1
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 9.8e-137 490.7 385 61.0
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 2.2e-136 489.6 375 61.6
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 6.3e-136 488.0 407 58.2
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 8.3e-136 487.6 373 61.7
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 1.1e-135 487.3 374 62.3
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 1.8e-135 486.5 373 62.7
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 1.8e-135 486.5 375 62.4
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 3.1e-135 485.7 368 60.3
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 3.1e-135 485.7 368 64.4
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 2.0e-134 483.0 419 58.0
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 2.0e-134 483.0 326 73.0
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 7.8e-134 481.1 377 61.3
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 7.8e-134 481.1 372 62.1
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 1.7e-133 479.9 368 60.9
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 2.9e-133 479.2 374 61.2
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 3.3e-132 475.7 375 61.9
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 4.3e-132 475.3 374 61.0
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 2.1e-131 473.0 378 60.3
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 3.6e-131 472.2 373 62.7
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 8.0e-131 471.1 376 60.6
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 1.4e-130 470.3 355 63.9
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 1.4e-130 470.3 376 59.0
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 2.3e-130 469.5 375 60.5
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 3.1e-130 469.2 355 63.7
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 4.0e-130 468.8 375 60.5
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 6.8e-130 468.0 379 60.7
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 6.8e-130 468.0 356 62.6
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 3.4e-129 465.7 375 60.0
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 2.9e-128 462.6 380 59.2
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 6.4e-128 461.5 346 63.9
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 1.1e-127 460.7 378 59.8
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 3.2e-127 459.1 375 59.5
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 7.8e-126 454.5 376 59.3
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 7.8e-126 454.5 376 59.3
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 6.6e-125 451.4 373 56.3
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 4.3e-124 448.7 372 59.1
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 2.1e-123 446.4 372 58.3
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 2.3e-122 443.0 372 58.9
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 6.8e-122 441.4 323 67.5
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 1.2e-121 440.7 402 57.0
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 4.9e-120 435.3 351 58.7
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 4.9e-120 435.3 373 54.4
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 5.4e-119 431.8 375 55.5
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 5.4e-119 431.8 369 55.0
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 1.6e-118 430.3 372 57.0
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 2.1e-118 429.9 373 54.2
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 4.3e-116 422.2 302 67.5
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 4.3e-116 422.2 378 54.5
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 4.7e-115 418.7 377 53.8
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 1.4e-114 417.2 355 57.2
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 4.6e-110 402.1 304 64.1
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 1.0e-109 401.0 375 52.3
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.1e-107 393.3 372 55.1
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 1.9e-103 380.2 277 65.0
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 6.6e-101 371.7 287 62.0
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 1.1e-100 370.9 275 66.2
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 4.8e-99 365.5 255 66.7
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 2.0e-97 360.1 253 66.8
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 5.8e-97 358.6 396 48.7
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 5.1e-93 345.5 282 60.3
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 3.1e-90 336.3 382 43.7
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 3.4e-89 332.8 375 45.6
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 4.5e-89 332.4 362 45.9
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 1.6e-86 323.9 340 49.4
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 1.0e-85 321.2 221 67.9
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 6.2e-83 312.0 373 43.4
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 4.6e-78 295.8 215 64.7
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 1.5e-68 264.2 181 65.7
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 1.6e-67 260.8 146 82.9
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 2.6e-65 253.4 391 34.0
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 8.5e-64 248.4 191 61.3
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 2.4e-50 203.8 170 57.1
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 5.0e-32 142.9 210 40.5
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 1.8e-29 134.4 113 60.2
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 4.0e-29 133.3 107 57.0
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 1.5e-28 131.3 86 73.3
Zm00001eb340150 Zea mays HOM05D006392 ORTHO05D008010 1.0e-13 82.0 79 51.9
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 4.0e-13 80.1 139 34.5
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 1.7e-08 64.7 45 51.1


User provided reference genes

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