Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62033784 Chenopodium quinoa HOM05D008320 ORTHO05D009883 4.1e-268 927.9 637 100.0
AUR62017405 Chenopodium quinoa HOM05D008320 ORTHO05D009883 1.3e-133 481.1 348 75.6
AUR62039152 Chenopodium quinoa HOM05D008320 ORTHO05D009883 5.7e-121 439.1 421 55.8
AUR62037987 Chenopodium quinoa HOM05D008320 ORTHO05D009883 1.4e-111 407.9 336 61.3
AUR62042854 Chenopodium quinoa HOM05D008320 ORTHO05D009883 3.7e-96 356.7 306 61.8
Ah.01g016300 Amaranthus hybridus HOM05D008448 ORTHO05D009883 8.1e-91 339.0 290 59.7
Ah.01g016470 Amaranthus hybridus HOM05D008448 ORTHO05D009883 2.4e-90 337.4 290 59.7
EL10As14g24081 Beta vulgaris HOM05D008320 ORTHO05D009883 1.0e-85 322.0 335 48.7
EL10Ac1g01700 Beta vulgaris HOM05D008320 ORTHO05D009883 6.9e-82 309.3 378 43.7
AUR62038967 Chenopodium quinoa HOM05D008320 ORTHO05D009883 1.5e-68 265.0 387 39.8
AUR62015374 Chenopodium quinoa HOM05D008320 ORTHO05D009883 1.7e-56 224.9 346 39.0
EL10Ac6g14284 Beta vulgaris HOM05D001399 ORTHO05D009883 2.8e-51 207.6 330 37.9
AUR62037028 Chenopodium quinoa HOM05D008320 ORTHO05D012961 1.1e-50 205.7 420 36.7
AUR62042466 Chenopodium quinoa HOM05D008320 ORTHO05D012961 4.1e-50 203.8 361 35.7
AUR62035512 Chenopodium quinoa HOM05D008448 ORTHO05D009883 3.6e-46 190.7 346 33.2
AUR62019630 Chenopodium quinoa HOM05D008320 ORTHO05D009883 4.3e-44 183.7 239 40.6
AUR62025566 Chenopodium quinoa HOM05D008448 ORTHO05D009883 9.7e-44 182.6 342 35.4
AUR62017232 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.7e-43 181.8 355 32.4
AUR62020436 Chenopodium quinoa HOM05D008320 ORTHO05D009883 4.8e-43 180.3 250 40.8
AUR62042136 Chenopodium quinoa HOM05D008320 ORTHO05D009883 8.2e-43 179.5 310 36.5
AUR62044200 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.1e-42 179.1 269 38.3
AUR62042664 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.0e-41 174.9 306 32.7
AUR62033810 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.6e-41 174.5 304 33.2
AUR62043719 Chenopodium quinoa HOM05D008320 ORTHO05D012961 2.6e-41 174.5 374 34.2
AUR62028448 Chenopodium quinoa HOM05D008320 ORTHO05D009883 1.7e-40 171.8 250 40.4
AUR62038601 Chenopodium quinoa HOM05D008320 ORTHO05D009883 8.5e-40 169.5 212 40.1
AUR62041270 Chenopodium quinoa HOM05D008320 ORTHO05D009883 2.5e-39 167.9 260 35.8
AUR62033089 Chenopodium quinoa HOM05D008320 ORTHO05D009883 1.6e-38 165.2 154 58.4
AUR62034042 Chenopodium quinoa HOM05D008320 ORTHO05D009883 6.1e-38 163.3 190 44.7
Ah.01g016480 Amaranthus hybridus HOM05D008320 ORTHO05D009883 2.3e-37 161.4 165 56.4
AUR62021600 Chenopodium quinoa HOM05D008320 ORTHO05D009883 3.0e-37 161.0 232 41.8
AUR62021183 Chenopodium quinoa HOM05D008448 ORTHO05D009883 5.1e-37 160.2 355 31.0
Ah.01g016310 Amaranthus hybridus HOM05D008320 ORTHO05D009883 8.8e-37 159.5 165 56.4
AUR62025563 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.6e-36 157.9 316 32.0
AUR62038853 Chenopodium quinoa HOM05D008320 ORTHO05D009883 2.6e-36 157.9 257 48.2
AUR62041020 Chenopodium quinoa HOM05D008448 ORTHO05D009883 4.4e-36 157.1 333 30.6
AUR62034935 Chenopodium quinoa HOM05D008320 ORTHO05D009883 4.8e-35 153.7 255 35.3
AUR62029691 Chenopodium quinoa HOM05D008320 ORTHO05D012961 6.3e-35 153.3 208 47.6
AUR62041835 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.1e-34 152.5 309 33.0
AUR62019474 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.9e-32 144.4 264 34.5
AUR62018712 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.5e-31 142.1 351 30.2
AUR62027995 Chenopodium quinoa HOM05D008448 ORTHO05D009883 4.2e-31 140.6 310 31.3
AUR62042631 Chenopodium quinoa HOM05D008448 ORTHO05D009883 7.2e-31 139.8 242 33.1
AUR62039782 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.1e-30 138.3 303 30.0
AUR62041092 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.1e-30 138.3 355 29.6
AUR62030606 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.4e-26 124.8 228 32.9
AUR62035592 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.9e-24 117.9 345 28.1
AUR62014831 Chenopodium quinoa HOM05D008448 ORTHO05D009883 8.5e-24 116.3 244 33.6
AUR62015725 Chenopodium quinoa HOM05D001371 ORTHO05D001319 2.1e-22 111.7 164 32.9
AUR62038404 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.4e-21 109.0 249 31.3
AUR62022342 Chenopodium quinoa HOM05D008448 ORTHO05D009883 1.5e-20 105.5 143 36.4
AUR62030114 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.3e-19 99.8 253 26.9
AUR62039435 Chenopodium quinoa HOM05D008320 ORTHO05D009883 7.0e-18 96.7 176 35.2
AUR62005044 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.5e-17 94.4 243 28.0
AUR62028801 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.7e-17 93.2 243 27.6
AUR62009195 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.2e-16 91.7 243 27.2
AUR62029710 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.2e-16 91.7 255 26.7
AUR62033389 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.9e-16 91.3 243 27.2
AUR62035363 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.9e-16 91.3 89 46.1
AUR62006070 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.8e-16 90.9 272 25.7
AUR62034039 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.8e-16 90.9 243 26.7
AUR62030619 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.0e-16 90.5 243 27.2
AUR62037412 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.5e-16 90.1 310 26.8
AUR62035391 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.5e-16 89.7 243 27.2
AUR62035718 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.5e-15 89.0 243 27.2
AUR62043619 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.9e-15 88.6 243 26.3
AUR62043170 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.2e-15 87.8 236 28.0
AUR62034174 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.5e-15 87.0 243 25.9
AUR62037064 Chenopodium quinoa HOM05D008320 ORTHO05D009883 5.5e-15 87.0 126 37.3
AUR62011252 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.2e-15 86.7 243 26.7
AUR62006829 Chenopodium quinoa HOM05D002461 ORTHO05D000898 9.5e-15 86.3 243 26.3
AUR62016684 Chenopodium quinoa HOM05D000554 ORTHO05D002829 1.2e-14 85.9 228 26.8
AUR62033779 Chenopodium quinoa HOM05D008320 ORTHO05D009883 2.1e-14 85.1 132 36.4
AUR62033075 Chenopodium quinoa HOM05D008320 ORTHO05D009883 3.6e-14 84.3 92 48.9
AUR62038800 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.7e-14 84.0 279 25.1
RcHm_v2.0_Chr6g0266671 Rosa chinensis HOM05D004096 ORTHO05D000898 4.7e-14 84.0 243 28.0
AUR62015292 Chenopodium quinoa HOM05D008448 ORTHO05D009883 8.0e-14 83.2 153 35.3
AUR62021179 Chenopodium quinoa HOM05D000170 ORTHO05D000159 8.0e-14 83.2 89 43.8
AUR62044323 Chenopodium quinoa HOM05D000170 ORTHO05D000159 8.0e-14 83.2 89 43.8
AUR62044548 Chenopodium quinoa HOM05D000170 ORTHO05D000159 8.0e-14 83.2 89 43.8
AUR62007003 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.0e-13 82.8 308 25.3
AUR62011603 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.0e-13 82.8 238 26.5
AUR62003872 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.3e-13 81.6 238 26.1
AUR62003732 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.0e-13 80.9 330 24.2
vmacro22169 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 8.8e-13 79.7 264 28.4
AUR62027923 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.2e-12 79.3 306 24.8
AUR62024626 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.5e-12 79.0 326 24.5
Prupe.7G070100 Prunus persica HOM05D004096 ORTHO05D000898 1.5e-12 79.0 297 26.3
RhsimUnG0240000 Rhododendron simsii HOM05D009719 ORTHO05D011041 5.7e-12 77.0 220 25.5
AUR62009170 Chenopodium quinoa HOM05D008320 ORTHO05D009883 7.5e-12 76.6 91 44.0
AUR62035231 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.5e-12 76.6 257 22.6
AUR62035341 Chenopodium quinoa HOM05D008320 ORTHO05D009883 7.5e-12 76.6 107 37.4
AUR62039695 Chenopodium quinoa HOM05D002461 ORTHO05D000898 9.8e-12 76.3 239 26.8
FAN04G2812 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.7e-11 75.5 250 25.2
FAN12G1875 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.7e-11 75.5 281 24.9
Os01g0152500 Oryza sativa ssp. japonica HOM05D008448 ORTHO05D009883 3.7e-11 74.3 246 23.2
Os11g0307600 Oryza sativa ssp. japonica HOM05D002461 ORTHO05D009883 4.9e-11 73.9 212 24.5
AUR62025549 Chenopodium quinoa HOM05D008320 ORTHO05D012961 6.3e-11 73.6 87 44.8
AUR62030713 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.3e-11 73.6 239 25.9
AUR62015686 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-10 72.4 293 26.3
Atru.chr10.1446 Acer truncatum HOM05D004096 ORTHO05D000898 1.8e-10 72.0 243 25.5
ECA247G2702 Erigeron canadensis HOM05D000014 ORTHO05D010592 1.8e-10 72.0 307 25.7
FAN18G0847 Fragaria x ananassa HOM05D004096 ORTHO05D000898 3.1e-10 71.2 281 25.3
AUR62014237 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.4e-10 70.5 212 26.4
AUR62016969 Chenopodium quinoa HOM05D008320 ORTHO05D009883 5.4e-10 70.5 56 48.2
AUR62012049 Chenopodium quinoa HOM05D008320 ORTHO05D009883 7.0e-10 70.1 129 34.9
AUR62026691 Chenopodium quinoa HOM05D008448 ORTHO05D009883 7.0e-10 70.1 87 36.8
AUR62032698 Chenopodium quinoa HOM05D008320 ORTHO05D009883 7.0e-10 70.1 72 48.6
AUR62040042 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.0e-10 70.1 212 26.4
AUR62041720 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.0e-10 70.1 239 24.7
AUR62031995 Chenopodium quinoa HOM05D008448 ORTHO05D009883 9.2e-10 69.7 65 43.1
AUR62042613 Chenopodium quinoa HOM05D002461 ORTHO05D000898 9.2e-10 69.7 181 27.1
AUR62035971 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.2e-09 69.3 209 24.4
Rhsim01G0228300 Rhododendron simsii HOM05D000537 ORTHO05D000415 1.6e-09 68.9 208 27.4
AUR62029783 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.0e-09 68.6 57 52.6
FAN09G2456 Fragaria x ananassa HOM05D004096 ORTHO05D010213 2.0e-09 68.6 321 24.3
vmacro10800 Vaccinium macrocarpon HOM05D011426 ORTHO05D011041 2.0e-09 68.6 242 27.7
AUR62035284 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.7e-09 68.2 256 23.8
AUR62034832 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.5e-09 67.8 212 25.9
SGA_v2.0_scaffold41G15799 Striga asiatica HOM05D017425 ORTHO05D019383 3.5e-09 67.8 287 24.4
SGA_v2.0_scaffold131G34381 Striga asiatica HOM05D002461 ORTHO05D002997 4.5e-09 67.4 290 24.8
RcHm_v2.0_Chr2g0155611 Rosa chinensis HOM05D010969 ORTHO05D015656 5.9e-09 67.0 251 24.3
AUR62037746 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.7e-09 66.6 181 27.1
Ah.10g026780 Amaranthus hybridus HOM05D006463 ORTHO05D002997 1.0e-08 66.2 242 21.9
FAN09G2500 Fragaria x ananassa HOM05D008674 ORTHO05D000898 1.0e-08 66.2 289 22.5
AUR62029050 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.7e-08 65.5 181 26.0
FvH4_7g31230 Fragaria vesca HOM05D000045 ORTHO05D000067 2.3e-08 65.1 280 22.9
AUR62002655 Chenopodium quinoa HOM05D008320 ORTHO05D009883 2.9e-08 64.7 160 31.2
AUR62042381 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.9e-08 64.7 62 45.2
AUR62044104 Chenopodium quinoa HOM05D008448 ORTHO05D009883 3.8e-08 64.3 247 23.5
FAN28G0502 Fragaria x ananassa HOM05D007993 ORTHO05D000898 3.8e-08 64.3 213 25.8
FvH4_4g05321 Fragaria vesca HOM05D004096 ORTHO05D000898 6.6e-08 63.5 209 23.4
AUR62038917 Chenopodium quinoa HOM05D000043 ORTHO05D044059 8.6e-08 63.2 63 46.0
FAN05G1382 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.1e-07 62.8 249 26.1
FAN16G2434 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.1e-07 62.8 249 26.1
FAN25G0030 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.1e-07 62.8 249 26.1
AUR62030064 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.9e-07 62.0 119 31.9
FvH4_5g19752 Fragaria vesca HOM05D004096 ORTHO05D000898 1.9e-07 62.0 303 24.8
FAN16G3666 Fragaria x ananassa HOM05D008674 ORTHO05D000898 2.5e-07 61.6 287 21.6
FAN22G0991 Fragaria x ananassa HOM05D004096 ORTHO05D000898 2.5e-07 61.6 249 26.1
FvH4_7g05770 Fragaria vesca HOM05D004096 ORTHO05D000898 4.3e-07 60.8 303 24.8
AUR62037613 Chenopodium quinoa HOM05D008448 ORTHO05D009883 5.6e-07 60.5 138 31.2
FAN25G1629 Fragaria x ananassa HOM05D004096 ORTHO05D000898 7.3e-07 60.1 217 24.9
FAN13G0792 Fragaria x ananassa HOM05D017852 ORTHO05D000898 9.5e-07 59.7 253 21.7
FAN28G2991 Fragaria x ananassa HOM05D008674 ORTHO05D000898 9.5e-07 59.7 271 22.5
Ah.07g200210 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.2e-06 59.3 197 24.9
FAN09G4098 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.2e-06 59.3 238 24.8
FAN09G4395 Fragaria x ananassa HOM05D004096 ORTHO05D025475 1.6e-06 58.9 238 24.8
FAN13G3014 Fragaria x ananassa HOM05D007993 ORTHO05D000898 1.6e-06 58.9 348 21.3
EL10Ac7g17236 Beta vulgaris HOM05D002461 ORTHO05D000898 2.1e-06 58.5 208 26.4
AUR62019069 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.1e-06 58.5 186 23.7
AUR62032142 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.1e-06 58.5 187 23.0
AUR62034984 Chenopodium quinoa HOM05D012707 ORTHO05D013844 2.1e-06 58.5 112 28.6
AUR62031194 Chenopodium quinoa HOM05D008448 ORTHO05D009883 2.8e-06 58.2 49 51.0
Ah.15g098050 Amaranthus hybridus HOM05D008448 ORTHO05D009883 3.6e-06 57.8 56 41.1
EL10Ac2g03335 Beta vulgaris HOM05D002461 ORTHO05D000898 4.7e-06 57.4 262 22.5
AUR62035994 Chenopodium quinoa HOM05D008320 ORTHO05D009883 4.7e-06 57.4 136 30.1
FAN22G2114 Fragaria x ananassa HOM05D004096 ORTHO05D000898 4.7e-06 57.4 236 25.4
AUR62025888 Chenopodium quinoa HOM05D008448 ORTHO05D009883 6.1e-06 57.0 84 38.1
HanXRQChr08g0223541 Helianthus annuus HOM05D002069 ORTHO05D001421 6.1e-06 57.0 271 25.5
Rhsim12G0083800 Rhododendron simsii HOM05D009719 ORTHO05D011041 6.1e-06 57.0 146 26.7
Atru.chr12.1974 Acer truncatum HOM05D008396 ORTHO05D000898 8.0e-06 56.6 109 29.4
AUR62040974 Chenopodium quinoa HOM05D008320 ORTHO05D138408 8.0e-06 56.6 43 48.8


User provided reference genes

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