Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62033693 Chenopodium quinoa HOM05D000107 ORTHO05D003213 7.7e-94 347.1 165 100.0
AUR62027978 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.2e-82 307.8 149 96.6
EL10As3g23351 Beta vulgaris HOM05D008455 ORTHO05D009597 1.2e-54 216.9 165 64.2
EL10Ac3g06518 Beta vulgaris HOM05D000107 ORTHO05D000062 2.6e-49 199.1 165 59.4
EL10Ac6g13954 Beta vulgaris HOM05D008455 ORTHO05D009597 5.6e-44 181.4 165 55.2
EL10Ac2g03817 Beta vulgaris HOM05D000107 ORTHO05D000062 1.6e-43 179.9 165 54.5
AUR62037410 Chenopodium quinoa HOM05D008455 ORTHO05D009597 7.6e-41 171.0 166 53.0
EL10Ac3g06258 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-40 170.2 165 53.3
AUR62037946 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.2e-39 164.1 162 52.5
AUR62040415 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.7e-38 162.5 156 47.4
EL10Ac4g08903 Beta vulgaris HOM05D000107 ORTHO05D000062 3.5e-38 162.2 153 52.9
Ah.02g116370 Amaranthus hybridus HOM05D000107 ORTHO05D003213 3.0e-37 159.1 154 52.6
EL10Ac2g03098 Beta vulgaris HOM05D000107 ORTHO05D000062 3.0e-37 159.1 142 54.9
EL10Ac2g03258 Beta vulgaris HOM05D000107 ORTHO05D003213 3.0e-37 159.1 137 56.9
EL10Ac3g06529 Beta vulgaris HOM05D008455 ORTHO05D009597 3.9e-37 158.7 147 54.4
EL10Ac9g22692 Beta vulgaris HOM05D000107 ORTHO05D000062 5.1e-37 158.3 165 49.7
EL10Ac8g19667 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-34 150.6 151 51.7
EL10Ac8g19666 Beta vulgaris HOM05D000107 ORTHO05D000062 2.5e-28 129.4 140 47.9
EL10Ac7g17382 Beta vulgaris HOM05D008455 ORTHO05D009597 6.9e-26 121.3 157 42.7
Peaxi162Scf00479g00422 Petunia axillaris HOM05D000107 ORTHO05D000062 1.0e-21 107.5 137 38.0
AUR62028450 Chenopodium quinoa HOM05D003339 ORTHO05D003847 5.1e-21 105.1 170 38.2
EL10Ac2g03319 Beta vulgaris HOM05D000107 ORTHO05D000062 9.9e-17 90.9 93 50.5
CAN.G1057.1 Capsicum annuum HOM05D001730 ORTHO05D003213 5.5e-15 85.1 133 35.3
CAN.G89.9 Capsicum annuum HOM05D000107 ORTHO05D000062 7.1e-15 84.7 121 32.2
EL10Ac7g17483 Beta vulgaris HOM05D000107 ORTHO05D000062 8.7e-13 77.8 80 43.8
EL10Ac8g19715 Beta vulgaris HOM05D000107 ORTHO05D000062 1.9e-12 76.6 80 43.8
QL05p061366 Quercus lobata HOM05D000107 ORTHO05D000062 7.4e-12 74.7 84 42.9
EL10Ac8g19688 Beta vulgaris HOM05D000107 ORTHO05D003213 1.3e-11 73.9 154 36.4
Rhsim03G0202400 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.7e-11 72.4 140 36.4
COL.COLO4_24166 Corchorus olitorius HOM05D000107 ORTHO05D003213 4.8e-11 72.0 152 29.6
EL10Ac3g06668 Beta vulgaris HOM05D000107 ORTHO05D000062 6.2e-11 71.6 78 42.3
EL10Ac6g14204 Beta vulgaris HOM05D000107 ORTHO05D003213 8.1e-11 71.2 154 35.1
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 2.4e-10 69.7 157 29.3
EL10Ac9g22369 Beta vulgaris HOM05D000107 ORTHO05D000062 2.4e-10 69.7 157 29.3
TPR.G36035 Trifolium pratense HOM05D000107 ORTHO05D000062 2.4e-10 69.7 169 29.6
EL10Ac6g14520 Beta vulgaris HOM05D007938 ORTHO05D009929 4.0e-10 68.9 112 36.6
QL09p027832 Quercus lobata HOM05D000107 ORTHO05D000062 4.0e-10 68.9 133 33.1
Rhsim02G0158700 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.0e-10 68.9 153 31.4
Rhsim12G0007200 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.0e-10 68.9 151 33.1
TWI31G1320 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 4.0e-10 68.9 150 30.0
Lj1g0007648 Lotus japonicus HOM05D000107 ORTHO05D003213 5.3e-10 68.6 88 40.9
PGSC0003DMG400023207 Solanum tuberosum HOM05D007930 ORTHO05D003213 5.3e-10 68.6 69 50.7
CSS0018002 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 6.9e-10 68.2 147 29.3
CSS0020537 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 6.9e-10 68.2 101 33.7
CSS0038506 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 6.9e-10 68.2 101 33.7
CSS0047073 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 6.9e-10 68.2 147 29.3
PSO541G4916 Papaver somniferum HOM05D000107 ORTHO05D000062 6.9e-10 68.2 125 34.4
Sopen01g021020 Solanum pennellii HOM05D000107 ORTHO05D009932 6.9e-10 68.2 69 47.8
EL10Ac1g01841 Beta vulgaris HOM05D000107 ORTHO05D000062 9.0e-10 67.8 155 30.3
CSS0034159 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 9.0e-10 67.8 159 28.3
Rhsim02G0220700 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.0e-10 67.8 68 48.5
Rhsim06G0085100 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.0e-10 67.8 68 48.5
Rhsim08G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.0e-10 67.8 68 48.5
Sopen02g004720 Solanum pennellii HOM05D000107 ORTHO05D000062 9.0e-10 67.8 69 47.8
TAR230G0001 Trochodendron aralioides HOM05D000107 ORTHO05D003213 9.0e-10 67.8 140 33.6
EL10Ac2g03017 Beta vulgaris HOM05D000107 ORTHO05D000062 1.2e-09 67.4 149 32.2
CSS0006285 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-09 67.4 159 28.3
CSS0013019 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-09 67.4 159 28.3
CSS0020176 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-09 67.4 159 28.3
CSS0022844 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-09 67.4 159 28.3
CSS0028705 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-09 67.4 147 28.6
CSS0033153 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-09 67.4 159 28.3
CSS0036792 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-09 67.4 159 28.3
CSS0043987 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-09 67.4 159 28.3
Sopen07g010120 Solanum pennellii HOM05D000014 ORTHO05D000016 1.2e-09 67.4 69 47.8
CSS0036122 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.5e-09 67.0 147 28.6
PSO566G0345 Papaver somniferum HOM05D000107 ORTHO05D000062 1.5e-09 67.0 119 31.9
Sopen04g011400 Solanum pennellii HOM05D000107 ORTHO05D000062 1.5e-09 67.0 69 46.4
EL10Ac2g03482 Beta vulgaris HOM05D007123 ORTHO05D000233 2.0e-09 66.6 114 29.8
CSS0031171 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.6e-09 66.2 147 28.6
CSS0035542 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.6e-09 66.2 159 28.3
Sopen01g017910 Solanum pennellii HOM05D000107 ORTHO05D000062 2.6e-09 66.2 69 46.4
Sopen07g016840 Solanum pennellii HOM05D000107 ORTHO05D000062 3.4e-09 65.9 69 46.4
Os08g0208400 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 4.5e-09 65.5 81 42.0
PSO210G0694 Papaver somniferum HOM05D000107 ORTHO05D000062 4.5e-09 65.5 112 30.4
Sopen01g009930 Solanum pennellii HOM05D000107 ORTHO05D000062 4.5e-09 65.5 69 46.4
Atru.chr1.497 Acer truncatum HOM05D000107 ORTHO05D000062 5.8e-09 65.1 112 33.0
Atru.chr5.1751 Acer truncatum HOM05D000107 ORTHO05D000062 5.8e-09 65.1 112 33.0
CANSAT78G1492 Cannabis sativa HOM05D000107 ORTHO05D000062 5.8e-09 65.1 139 31.7
Gorai.010G175300 Gossypium raimondii HOM05D000107 ORTHO05D000062 5.8e-09 65.1 83 36.1
Rhsim11G0143900 Rhododendron simsii HOM05D000107 ORTHO05D000062 7.6e-09 64.7 110 32.7
Sopen10g018620 Solanum pennellii HOM05D000107 ORTHO05D000062 7.6e-09 64.7 69 46.4
PGSC0003DMG400018891 Solanum tuberosum HOM05D000107 ORTHO05D003213 7.6e-09 64.7 137 29.9
CSS0015469 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 1.0e-08 64.3 79 40.5
HanXRQChr05g0153531 Helianthus annuus HOM05D000107 ORTHO05D000062 1.0e-08 64.3 113 29.2
PSO063G5761 Papaver somniferum HOM05D000107 ORTHO05D000062 1.0e-08 64.3 112 30.4
PSO210G2390 Papaver somniferum HOM05D000107 ORTHO05D000062 1.0e-08 64.3 112 30.4
PSO210G4818 Papaver somniferum HOM05D000107 ORTHO05D000062 1.0e-08 64.3 112 30.4
PSO210G4883 Papaver somniferum HOM05D000107 ORTHO05D000062 1.0e-08 64.3 112 30.4
PSO210G6071 Papaver somniferum HOM05D000107 ORTHO05D000062 1.0e-08 64.3 112 30.4
PSO210G6963 Papaver somniferum HOM05D000107 ORTHO05D000062 1.0e-08 64.3 112 30.4
PSO461G0010 Papaver somniferum HOM05D000107 ORTHO05D000062 1.0e-08 64.3 112 30.4
PSO566G0081 Papaver somniferum HOM05D000107 ORTHO05D000062 1.0e-08 64.3 112 30.4
PSO675G6583 Papaver somniferum HOM05D000107 ORTHO05D000062 1.0e-08 64.3 112 30.4
PSO782G5410 Papaver somniferum HOM05D000107 ORTHO05D000062 1.0e-08 64.3 112 30.4
Sopen03g018530 Solanum pennellii HOM05D000004 ORTHO05D009932 1.0e-08 64.3 69 43.5
PSO541G0711 Papaver somniferum HOM05D000107 ORTHO05D000062 1.3e-08 63.9 112 30.4
Sopen08g011050 Solanum pennellii HOM05D000107 ORTHO05D000062 1.3e-08 63.9 69 46.4
arahy.Tifrunner.gnm1.ann1.EFR0N4 Arachis hypogaea HOM05D000107 ORTHO05D000062 1.7e-08 63.5 69 43.5
EL10Ac7g17430 Beta vulgaris HOM05D007123 ORTHO05D000233 1.7e-08 63.5 105 33.3
Rhsim01G0188000 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-08 63.5 110 30.9
Rhsim09G0057000 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.7e-08 63.5 167 28.7
CANSAT78G2036 Cannabis sativa HOM05D000107 ORTHO05D000062 2.2e-08 63.2 139 31.7
AUR62032944 Chenopodium quinoa HOM05D003542 ORTHO05D000062 2.2e-08 63.2 76 42.1
Hma1.2p1_2133F.1_g314790 Hydrangea macrophylla HOM05D000107 ORTHO05D000062 2.2e-08 63.2 147 27.9
Lj1g0023677 Lotus japonicus HOM05D000107 ORTHO05D003213 2.2e-08 63.2 84 34.5
PSO210G1454 Papaver somniferum HOM05D000107 ORTHO05D000062 2.2e-08 63.2 112 30.4
Sopen05g025940 Solanum pennellii HOM05D000107 ORTHO05D000062 2.2e-08 63.2 69 44.9
EL10Ac4g08550 Beta vulgaris HOM05D007123 ORTHO05D000233 2.9e-08 62.8 105 31.4
EL10Ac9g22743 Beta vulgaris HOM05D000107 ORTHO05D000062 2.9e-08 62.8 155 28.4
PSO724G0950 Papaver somniferum HOM05D000107 ORTHO05D000062 2.9e-08 62.8 112 30.4
PSO832G2473 Papaver somniferum HOM05D000107 ORTHO05D000062 2.9e-08 62.8 112 30.4
TAR049G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 2.9e-08 62.8 128 31.2
Ah.05g172280 Amaranthus hybridus HOM05D000107 ORTHO05D003213 3.8e-08 62.4 97 33.0
CAN.G172.3 Capsicum annuum HOM05D022282 ORTHO05D017747 3.8e-08 62.4 152 30.3
PSO170G6590 Papaver somniferum HOM05D000107 ORTHO05D000062 3.8e-08 62.4 154 28.6
QL05p055903 Quercus lobata HOM05D000240 ORTHO05D003213 3.8e-08 62.4 104 29.8
Sopen12g016210 Solanum pennellii HOM05D000107 ORTHO05D009932 3.8e-08 62.4 69 46.4
Lj2g0003377 Lotus japonicus HOM05D000107 ORTHO05D000062 4.9e-08 62.0 98 35.7
Lj4g0021587 Lotus japonicus HOM05D000107 ORTHO05D000062 4.9e-08 62.0 98 35.7
PSO421G0530 Papaver somniferum HOM05D000107 ORTHO05D000062 4.9e-08 62.0 106 30.2
QL01p002857 Quercus lobata HOM05D000240 ORTHO05D003213 4.9e-08 62.0 104 28.8
QL04p081146 Quercus lobata HOM05D000107 ORTHO05D003213 4.9e-08 62.0 104 28.8
Sopen10g014350 Solanum pennellii HOM05D000107 ORTHO05D000062 4.9e-08 62.0 69 44.9
PGSC0003DMG400046730 Solanum tuberosum HOM05D000107 ORTHO05D012342 4.9e-08 62.0 137 35.0
HanXRQChr09g0257551 Helianthus annuus HOM05D000187 ORTHO05D003213 6.5e-08 61.6 79 32.9
MBI17_g17142_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.5e-08 61.6 159 27.7
Rhsim13G0141700 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.5e-08 61.6 129 33.3
Ah.03g145030 Amaranthus hybridus HOM05D000107 ORTHO05D000568 8.4e-08 61.2 166 29.5
Ah.14g078660 Amaranthus hybridus HOM05D000107 ORTHO05D000568 8.4e-08 61.2 87 33.3
EL10Ac5g11297 Beta vulgaris HOM05D007123 ORTHO05D000233 8.4e-08 61.2 122 29.5
Rhsim01G0072500 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.4e-08 61.2 109 30.3
TWI74G1678 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 8.4e-08 61.2 79 38.0
Ah.08g220140 Amaranthus hybridus HOM05D000107 ORTHO05D003213 1.1e-07 60.8 93 33.3
Migut.D01462 Erythranthe guttata HOM05D000107 ORTHO05D000062 1.1e-07 60.8 140 28.6
HanXRQChr13g0403301 Helianthus annuus HOM05D000107 ORTHO05D000062 1.1e-07 60.8 87 37.9
TWI79G1345 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.1e-07 60.8 69 40.6
CSS0013554 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D003213 1.4e-07 60.5 79 38.0
CANSAT64G0358 Cannabis sativa HOM05D000107 ORTHO05D000062 1.4e-07 60.5 95 34.7
Sopen06g015790 Solanum pennellii HOM05D000004 ORTHO05D000062 1.4e-07 60.5 89 39.3
Ah.13g068990 Amaranthus hybridus HOM05D000107 ORTHO05D003213 1.9e-07 60.1 80 33.8
Lj8C456G3 Lonicera japonica HOM05D000107 ORTHO05D000062 1.9e-07 60.1 114 27.2
TAR709G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000568 1.9e-07 60.1 118 32.2
Atru.chr3.1417 Acer truncatum HOM05D000107 ORTHO05D000062 2.5e-07 59.7 148 29.1
PSO339G0403 Papaver somniferum HOM05D000107 ORTHO05D000062 2.5e-07 59.7 89 32.6
Sopen09g019560 Solanum pennellii HOM05D000004 ORTHO05D000002 2.5e-07 59.7 127 33.1
AUR62018146 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.2e-07 58.9 68 39.7
MBI11_g22671_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.2e-07 58.9 103 30.1
Rhsim05G0124400 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.2e-07 58.9 110 27.3
Rhsim11G0023200 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.2e-07 58.9 110 27.3
TPR.G18679 Trifolium pratense HOM05D000107 ORTHO05D000062 4.2e-07 58.9 140 28.6
Ah.14g079590 Amaranthus hybridus HOM05D000107 ORTHO05D000062 5.5e-07 58.5 80 33.8
AUR62041533 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.5e-07 58.5 141 32.6
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.5e-07 58.5 85 35.3
Rhsim09G0047500 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.5e-07 58.5 85 35.3
RhsimUnG0181200 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.5e-07 58.5 85 35.3
CANSAT11G2258 Cannabis sativa HOM05D000107 ORTHO05D000062 7.1e-07 58.2 120 31.7
ECA248G0231 Erigeron canadensis HOM05D000107 ORTHO05D000062 7.1e-07 58.2 87 34.5
Atru.chr11.780 Acer truncatum HOM05D000107 ORTHO05D000062 9.3e-07 57.8 68 38.2
PGR102G0480 Punica granatum HOM05D000107 ORTHO05D000062 9.3e-07 57.8 159 28.9
Prupe.2G062700 Prunus persica HOM05D000107 ORTHO05D003213 1.2e-06 57.4 79 32.9
Atru.chr4.799 Acer truncatum HOM05D000107 ORTHO05D000062 1.6e-06 57.0 68 36.8
EL10Ac8g19929 Beta vulgaris HOM05D007123 ORTHO05D003213 1.6e-06 57.0 81 34.6
MELO3C010327.2 Cucumis melo HOM05D000107 ORTHO05D000062 1.6e-06 57.0 164 26.8
Rhsim11G0024300 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-06 57.0 110 26.4
Ah.14g079910 Amaranthus hybridus HOM05D000107 ORTHO05D003213 2.1e-06 56.6 84 33.3
Ah.15g097390 Amaranthus hybridus HOM05D000107 ORTHO05D000062 2.1e-06 56.6 87 32.2
Os08g0215200 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D003213 2.1e-06 56.6 80 38.8
Atru.chr1.1625 Acer truncatum HOM05D000107 ORTHO05D000062 2.7e-06 56.2 68 36.8
MBI19_g30599_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 2.7e-06 56.2 135 26.7
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 2.7e-06 56.2 140 30.7
CANSAT54G0103 Cannabis sativa HOM05D000107 ORTHO05D000062 3.5e-06 55.8 96 32.3
PSO781G0208 Papaver somniferum HOM05D000107 ORTHO05D000062 3.5e-06 55.8 98 30.6
Atru.chr2.1893 Acer truncatum HOM05D000107 ORTHO05D000062 4.6e-06 55.5 68 35.3
Ah.08g223240 Amaranthus hybridus HOM05D000107 ORTHO05D000062 4.6e-06 55.5 148 27.0
AUR62038913 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.6e-06 55.5 68 39.7
Hma1.2p1_0613F.1_g189140 Hydrangea macrophylla HOM05D007798 ORTHO05D009882 4.6e-06 55.5 139 31.7
TWI59G1300 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 4.6e-06 55.5 158 26.6
AUR62022208 Chenopodium quinoa HOM05D009516 ORTHO05D010476 6.0e-06 55.1 157 28.0
Atru.chr2.1683 Acer truncatum HOM05D000107 ORTHO05D000062 7.9e-06 54.7 68 36.8
Hma1.2p1_0902F.1_g234770 Hydrangea macrophylla HOM05D000107 ORTHO05D003213 7.9e-06 54.7 141 29.8


User provided reference genes

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