Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 4.3e-84 314.7 167 100.0
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 6.7e-61 237.7 139 89.9
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 1.1e-50 203.8 173 68.8
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 1.1e-42 177.2 180 62.2
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 8.8e-29 131.0 172 48.3
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 4.4e-28 128.6 112 64.3
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 5.7e-28 128.3 180 48.9
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 5.7e-28 128.3 180 48.9
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 5.7e-28 128.3 180 48.9
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 7.4e-28 127.9 173 46.8
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 9.7e-28 127.5 169 49.1
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 3.7e-27 125.6 174 50.0
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 4.8e-27 125.2 167 49.1
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 1.1e-26 124.0 93 73.1
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 1.8e-26 123.2 181 46.4
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 4.1e-26 122.1 107 61.7
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 4.1e-26 122.1 173 46.2
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 5.3e-26 121.7 165 49.7
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 5.3e-26 121.7 173 46.2
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 6.9e-26 121.3 115 61.7
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 6.9e-26 121.3 104 65.4
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 9.1e-26 120.9 138 52.2
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 1.2e-25 120.6 90 71.1
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 1.2e-25 120.6 180 45.0
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 1.5e-25 120.2 108 63.0
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 1.5e-25 120.2 108 63.0
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 1.5e-25 120.2 91 71.4
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 1.5e-25 120.2 174 45.4
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 2.0e-25 119.8 136 54.4
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 2.6e-25 119.4 106 66.0
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 4.5e-25 118.6 119 59.7
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 7.7e-25 117.9 160 52.5
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 7.7e-25 117.9 126 57.1
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 7.7e-25 117.9 166 48.8
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 7.7e-25 117.9 162 48.8
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 1.3e-24 117.1 120 55.0
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 1.7e-24 116.7 130 54.6
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 2.2e-24 116.3 169 47.9
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 2.2e-24 116.3 167 49.1
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 2.2e-24 116.3 157 50.3
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 2.2e-24 116.3 165 48.5
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 3.8e-24 115.5 175 46.3
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 3.8e-24 115.5 96 66.7
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 5.0e-24 115.2 177 48.0
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 5.0e-24 115.2 152 51.3
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 6.5e-24 114.8 92 66.3
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 6.5e-24 114.8 99 66.7
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 6.5e-24 114.8 96 66.7
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 1.1e-23 114.0 107 62.6
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 1.1e-23 114.0 164 47.6
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 1.1e-23 114.0 130 53.8
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 1.9e-23 113.2 174 46.0
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 2.5e-23 112.8 157 49.7
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 2.5e-23 112.8 157 49.7
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 3.2e-23 112.5 161 47.2
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 3.2e-23 112.5 100 65.0
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 4.2e-23 112.1 104 61.5
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 4.2e-23 112.1 144 48.6
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 5.5e-23 111.7 121 55.4
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 7.2e-23 111.3 147 49.0
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 7.2e-23 111.3 98 66.3
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 9.4e-23 110.9 111 57.7
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 9.4e-23 110.9 111 57.7
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 9.4e-23 110.9 111 57.7
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 9.4e-23 110.9 104 61.5
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 1.2e-22 110.5 175 45.1
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 1.6e-22 110.2 162 46.3
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 3.6e-22 109.0 126 50.0
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 4.7e-22 108.6 153 47.7
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 6.1e-22 108.2 167 46.1
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 1.4e-21 107.1 123 51.2
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 1.4e-21 107.1 153 47.7
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 3.9e-21 105.5 175 44.0
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 6.7e-21 104.8 76 73.7
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 6.7e-21 104.8 156 46.2
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 6.7e-21 104.8 114 57.0
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 8.8e-21 104.4 130 50.0
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 1.1e-20 104.0 156 46.8
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 1.5e-20 103.6 170 43.5
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 1.5e-20 103.6 170 42.9
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 5.7e-20 101.7 166 45.2
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 5.7e-20 101.7 166 45.2
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 9.7e-20 100.9 164 46.3
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 9.7e-20 100.9 120 55.8
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 1.3e-19 100.5 154 46.8
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 1.7e-19 100.1 75 69.3
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 3.7e-19 99.0 71 73.2
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 4.8e-19 98.6 149 46.3
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 5.3e-18 95.1 78 67.9
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 2.0e-17 93.2 130 47.7
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 2.0e-17 93.2 97 57.7
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 2.0e-17 93.2 131 46.6
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 2.6e-17 92.8 162 45.1
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 3.5e-17 92.4 84 60.7
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 4.5e-17 92.0 166 39.2
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 1.3e-16 90.5 111 47.7
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 2.2e-16 89.7 60 73.3
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 8.5e-16 87.8 59 72.9
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 1.1e-15 87.4 158 38.6
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 1.2e-14 84.0 76 61.8
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 4.8e-11 72.0 56 67.9
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 1.4e-10 70.5 94 45.7
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 2.0e-09 66.6 98 44.9
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 3.8e-08 62.4 105 38.1


User provided reference genes

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