Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62033501 Chenopodium quinoa HOM05D005679 ORTHO05D007228 8.4e-120 433.7 222 100.0
AUR62028549 Chenopodium quinoa HOM05D005679 ORTHO05D007228 4.8e-67 258.5 198 73.7
EL10Ac7g16934 Beta vulgaris HOM05D005679 ORTHO05D007228 5.8e-36 155.2 189 50.3
Ciclev10012247m.g Citrus clementina HOM05D005679 ORTHO05D007228 8.6e-32 141.4 186 46.8
vmacro07401 Vaccinium macrocarpon HOM05D005679 ORTHO05D007228 1.5e-31 140.6 179 46.4
CiPaw.09G012600 Carya illinoinensis HOM05D005679 ORTHO05D007228 3.3e-31 139.4 179 46.4
Rhsim03G0076400 Rhododendron simsii HOM05D005679 ORTHO05D007228 3.3e-31 139.4 179 46.4
Sc02g0000910 Simmondsia chinensis HOM05D005679 ORTHO05D007228 4.3e-31 139.0 185 44.3
Ah.08g210640 Amaranthus hybridus HOM05D005679 ORTHO05D007228 5.6e-31 138.7 191 50.3
Haze_19592 Corylus avellana HOM05D005679 ORTHO05D007228 7.3e-31 138.3 177 52.0
Potri.006G083300 Populus trichocarpa HOM05D005679 ORTHO05D007228 1.6e-30 137.1 179 46.4
GSVIVG01033827001 Vitis vinifera HOM05D005679 ORTHO05D007228 8.1e-30 134.8 219 39.7
TAR633G0672 Trochodendron aralioides HOM05D005679 ORTHO05D007228 1.8e-29 133.7 180 43.9
QL07p039311 Quercus lobata HOM05D005679 ORTHO05D007228 2.3e-29 133.3 179 47.5
Solyc09g009630.3 Solanum lycopersicum HOM05D005679 ORTHO05D007228 1.5e-28 130.6 180 43.9
Sopen09g004390 Solanum pennellii HOM05D005679 ORTHO05D007228 2.6e-28 129.8 180 43.3
Atru.chr8.1566 Acer truncatum HOM05D005679 ORTHO05D007228 3.4e-28 129.4 210 41.9
PGR004G0569 Punica granatum HOM05D005679 ORTHO05D007228 4.4e-28 129.0 179 44.7
TWI53G0317 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 4.4e-28 129.0 181 43.6
Sabra06G0062900 Salix brachista HOM05D005679 ORTHO05D007228 1.3e-27 127.5 179 45.3
PGSC0003DMG401002654 Solanum tuberosum HOM05D005679 ORTHO05D007228 1.3e-27 127.5 179 44.1
Hma1.2p1_0536F.1_g174040 Hydrangea macrophylla HOM05D005679 ORTHO05D007228 1.7e-27 127.1 179 43.6
MELO3C009462.2 Cucumis melo HOM05D005679 ORTHO05D007228 2.9e-27 126.3 179 44.7
AT2G36305 Arabidopsis thaliana HOM05D005679 ORTHO05D007228 3.8e-27 125.9 178 42.1
arahy.Tifrunner.gnm1.ann1.5KE53F Arachis hypogaea HOM05D005679 ORTHO05D007228 4.9e-27 125.6 179 42.5
CsaV3_3G037160 Cucumis sativus L. HOM05D005679 ORTHO05D007228 4.9e-27 125.6 179 45.3
Manes.09G056451 Manihot esculenta HOM05D005679 ORTHO05D007228 6.4e-27 125.2 211 39.8
arahy.Tifrunner.gnm1.ann1.J82H2E Arachis hypogaea HOM05D005679 ORTHO05D007228 8.4e-27 124.8 179 41.9
THA.LOC104807091 Tarenaya hassleriana HOM05D005679 ORTHO05D007228 8.4e-27 124.8 177 42.9
Nitab4.5_0002400g0100 Nicotiana tabacum HOM05D005679 ORTHO05D007228 2.4e-26 123.2 194 41.8
Peaxi162Scf00040g01117 Petunia axillaris HOM05D005679 ORTHO05D007228 2.4e-26 123.2 187 41.7
COL.COLO4_29768 Corchorus olitorius HOM05D005679 ORTHO05D007228 3.2e-26 122.9 180 40.6
Duzib093G1300 Durio zibethinus HOM05D005679 ORTHO05D007228 3.2e-26 122.9 180 42.8
TAR636G2700 Trochodendron aralioides HOM05D005679 ORTHO05D007228 3.2e-26 122.9 183 42.6
TWI77G0106 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 4.1e-26 122.5 181 42.5
Actinidia05440 Actinidia chinensis HOM05D005679 ORTHO05D007228 7.1e-26 121.7 177 44.1
CANSAT80G1368 Cannabis sativa HOM05D005679 ORTHO05D007228 7.1e-26 121.7 222 41.0
Sed0004661 Sechium edule HOM05D005679 ORTHO05D007228 7.1e-26 121.7 180 45.6
MD14G1020800 Malus domestica HOM05D005679 ORTHO05D007228 9.2e-26 121.3 179 41.9
Sp4g18530 Schrenkiella parvula HOM05D005679 ORTHO05D007228 1.2e-25 120.9 178 41.0
AL4G32420 Arabidopsis lyrata HOM05D005679 ORTHO05D007228 1.6e-25 120.6 178 42.7
MD12G1023600 Malus domestica HOM05D005679 ORTHO05D007228 1.6e-25 120.6 179 43.0
A03p20010 Brassica napus HOM05D005679 ORTHO05D007228 2.1e-25 120.2 177 41.2
BraA03t11252Z Brassica rapa HOM05D005679 ORTHO05D007228 2.1e-25 120.2 177 41.2
Nitab4.5_0001725g0030 Nicotiana tabacum HOM05D005679 ORTHO05D007228 2.1e-25 120.2 179 41.9
Lj2A135T55 Lonicera japonica HOM05D005679 ORTHO05D007228 2.7e-25 119.8 193 39.9
Gorai.009G404000 Gossypium raimondii HOM05D005679 ORTHO05D007228 3.5e-25 119.4 179 41.9
BcaB01g03852 Brassica carinata HOM05D005679 ORTHO05D007228 4.6e-25 119.0 223 36.8
Gohir.D04G100800 Gossypium hirsutum HOM05D005679 ORTHO05D007228 4.6e-25 119.0 179 43.0
ClCG10G019090 Citrullus lanatus HOM05D005679 ORTHO05D007228 6.0e-25 118.6 179 45.3
C03p23450 Brassica napus HOM05D005679 ORTHO05D007228 7.8e-25 118.2 177 41.8
Oeu047193.1 Olea europaea HOM05D005679 ORTHO05D007228 7.8e-25 118.2 219 34.2
Thecc.05G087100 Theobroma cacao HOM05D005679 ORTHO05D007228 1.0e-24 117.9 185 42.2
BcaC01g05669 Brassica carinata HOM05D005679 ORTHO05D007228 1.7e-24 117.1 177 41.8
BolC3t14741H Brassica oleracea HOM05D005679 ORTHO05D007228 3.0e-24 116.3 177 41.8
Carub.0004s1806 Capsella rubella HOM05D005679 ORTHO05D007228 3.0e-24 116.3 223 36.8
Nn6g34939 Nelumbo nucifera HOM05D005679 ORTHO05D007228 3.0e-24 116.3 222 36.9
Glyma.13G153052 Glycine max HOM05D005679 ORTHO05D007228 3.9e-24 115.9 189 39.7
VMungo0720G0655 Vigna mungo HOM05D005679 ORTHO05D007228 5.1e-24 115.5 179 39.1
Cc06_g05640 Coffea canephora HOM05D005679 ORTHO05D007228 6.6e-24 115.2 211 37.9
Lalb_Chr21g0315771 Lupinus albus HOM05D005679 ORTHO05D007228 6.6e-24 115.2 180 42.8
Gohir.A04G063700 Gossypium hirsutum HOM05D005679 ORTHO05D007228 8.6e-24 114.8 179 41.3
Medtr1g060300 Medicago truncatula HOM05D005679 ORTHO05D007228 1.5e-23 114.0 179 39.7
CARHR130580 Cardamine hirsuta HOM05D005679 ORTHO05D007228 3.3e-23 112.8 178 39.9
Eucgr.A01508 Eucalyptus grandis HOM05D005679 ORTHO05D007228 4.3e-23 112.5 179 39.1
Dinv21221 Davidia involucrata HOM05D005679 ORTHO05D007228 7.3e-23 111.7 137 48.2
Thhalv10016950m.g Eutrema salsugineum HOM05D005679 ORTHO05D007228 1.2e-22 110.9 221 36.7
PSO384G2019 Papaver somniferum HOM05D005679 ORTHO05D007228 1.2e-22 110.9 189 39.2
Phvul.007G229100 Phaseolus vulgaris HOM05D005679 ORTHO05D007228 1.6e-22 110.5 189 38.1
PSO339G3946 Papaver somniferum HOM05D005679 ORTHO05D007228 2.1e-22 110.2 185 37.8
Lj5g0006681 Lotus japonicus HOM05D005679 ORTHO05D007228 2.8e-22 109.8 179 40.2
HanXRQChr10g0313901 Helianthus annuus HOM05D005679 ORTHO05D007228 3.6e-22 109.4 188 37.8
Aa31LG5G21440 Aethionema arabicum HOM05D005679 ORTHO05D007228 1.1e-21 107.8 222 35.1
Migut.J01051 Erythranthe guttata HOM05D005679 ORTHO05D007228 1.4e-21 107.5 179 38.5
Psat6g080840 Pisum sativum HOM05D005679 ORTHO05D007228 1.4e-21 107.5 182 37.9
SalBow3G2040 Salvia bowleyana HOM05D005679 ORTHO05D007228 1.4e-21 107.5 187 38.0
RcHm_v2.0_Chr3g0472981 Rosa chinensis HOM05D005679 ORTHO05D007228 1.8e-21 107.1 179 39.1
TPR.G31118 Trifolium pratense HOM05D005679 ORTHO05D007228 1.8e-21 107.1 182 37.4
FAN02G2684 Fragaria x ananassa HOM05D005679 ORTHO05D007228 4.0e-21 105.9 179 38.0
FvH4_6g18450 Fragaria vesca HOM05D005679 ORTHO05D007228 5.2e-21 105.5 181 39.8
FAN14G3109 Fragaria x ananassa HOM05D005679 ORTHO05D007228 5.2e-21 105.5 181 39.8
ECA248G1272 Erigeron canadensis HOM05D005679 ORTHO05D007228 6.9e-21 105.1 171 39.2
HanXRQChr11g0340241 Helianthus annuus HOM05D005679 ORTHO05D007228 6.9e-21 105.1 177 38.4
Ca_26654_v3 Cicer arietinum L. HOM05D005679 ORTHO05D007228 1.2e-20 104.4 181 37.6
Aqoxy4G02804 Aquilegia oxysepala HOM05D005679 ORTHO05D007228 2.6e-20 103.2 177 40.1
FAN05G0675 Fragaria x ananassa HOM05D005679 ORTHO05D007228 3.4e-20 102.8 179 37.4
FAN05G4213 Fragaria x ananassa HOM05D005679 ORTHO05D007228 3.4e-20 102.8 179 37.4
HanXRQChr13g0424691 Helianthus annuus HOM05D005679 ORTHO05D007228 3.4e-20 102.8 168 38.7
Lsat_1_v5_gn_1_48041 Lactuca sativa HOM05D005679 ORTHO05D007228 5.8e-20 102.1 179 39.1
ATR0568G150 Amborella trichopoda HOM05D005679 ORTHO05D007228 1.3e-19 100.9 182 38.5
MSTRG.5837 Avicennia marina HOM05D005679 ORTHO05D007228 1.3e-19 100.9 233 33.5
SHI23954 Sapria himalayana HOM05D005679 ORTHO05D007228 3.2e-18 96.3 211 35.1
HPP92_006355 Vanilla planifolia HOM05D005679 ORTHO05D007228 4.2e-18 95.9 213 36.2
Dinv31674 Davidia involucrata HOM05D005679 ORTHO05D007228 3.5e-17 92.8 184 37.5
SEGI_36814 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 6.0e-17 92.0 190 33.7
SGA_v2.0_scaffold13G06736 Striga asiatica HOM05D005679 ORTHO05D007228 2.3e-16 90.1 166 36.1
Zm00001eb285910 Zea mays HOM05D005679 ORTHO05D007228 1.6e-14 84.0 187 34.2
unitig_749.g14296 Utricularia gibba HOM05D005679 ORTHO05D007228 9.0e-13 78.2 177 33.9
CSS0002811 Camellia sinensis var. sinensis HOM05D005679 ORTHO05D007228 2.6e-12 76.6 72 51.4
Lj9A526G37 Lonicera japonica HOM05D005679 ORTHO05D007228 4.9e-11 72.4 135 34.1
CAN.G397.28 Capsicum annuum HOM05D005679 ORTHO05D007228 1.9e-10 70.5 71 53.5
Pp3c4_17190 Physcomitrium patens HOM05D005679 ORTHO05D007228 3.2e-10 69.7 178 30.9
Glyma.10G071200 Glycine max HOM05D005679 ORTHO05D007228 3.5e-09 66.2 106 35.8
HanXRQChr10g0313981 Helianthus annuus HOM05D005679 ORTHO05D007228 3.9e-08 62.8 107 35.5
Prupe.7G112900 Prunus persica HOM05D005679 ORTHO05D007228 1.3e-06 57.8 71 46.5
Actinidia14313 Actinidia chinensis HOM05D005679 ORTHO05D007228 4.8e-06 55.8 44 68.2


User provided reference genes

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