Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62033477 Chenopodium quinoa HOM05D003948 ORTHO05D004610 6.0e-183 644.0 326 100.0
AUR62011090 Chenopodium quinoa HOM05D003948 ORTHO05D004610 9.4e-144 513.8 285 92.6
Ah.09g225870 Amaranthus hybridus HOM05D003948 ORTHO05D004610 1.6e-122 443.4 328 71.6
EL10Ac8g18617 Beta vulgaris HOM05D003948 ORTHO05D004610 5.2e-118 428.3 332 68.7
AUR62011108 Chenopodium quinoa HOM05D003948 ORTHO05D004610 5.7e-109 398.3 235 86.4
TAR625G1371 Trochodendron aralioides HOM05D003948 ORTHO05D004610 3.9e-89 332.4 329 56.2
Thecc.09G123100 Theobroma cacao HOM05D003948 ORTHO05D004610 9.5e-88 327.8 316 56.0
Dinv36546 Davidia involucrata HOM05D003948 ORTHO05D004610 4.7e-87 325.5 322 55.6
Manes.14G130600 Manihot esculenta HOM05D003948 ORTHO05D004610 1.4e-86 323.9 328 53.4
Dinv30573 Davidia involucrata HOM05D003948 ORTHO05D004610 1.2e-85 320.9 330 51.5
MBI04_g24205_MAGBIO Magnolia biondii HOM05D003948 ORTHO05D004610 2.6e-85 319.7 332 52.7
TWI34G1010 Tripterygium wilfordii HOM05D003948 ORTHO05D004610 2.6e-85 319.7 329 53.2
QL02p087786 Quercus lobata HOM05D003948 ORTHO05D004610 7.6e-85 318.2 301 54.8
Duzib168G1107 Durio zibethinus HOM05D003948 ORTHO05D004610 9.9e-85 317.8 332 54.2
Nn8g39388 Nelumbo nucifera HOM05D003948 ORTHO05D004610 1.3e-84 317.4 328 51.5
CSS0012666 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 1.7e-84 317.0 316 54.1
TPR.G37189 Trifolium pratense HOM05D003948 ORTHO05D004610 2.2e-84 316.6 317 53.3
Actinidia15794 Actinidia chinensis HOM05D003948 ORTHO05D004610 2.9e-84 316.2 327 53.2
CiPaw.03G241800 Carya illinoinensis HOM05D003948 ORTHO05D004610 2.9e-84 316.2 329 52.0
Manes.11G053200 Manihot esculenta HOM05D003948 ORTHO05D004610 3.8e-84 315.8 319 52.7
COL.COLO4_05762 Corchorus olitorius HOM05D003948 ORTHO05D004610 1.9e-83 313.5 303 55.4
COL.COLO4_12905 Corchorus olitorius HOM05D003948 ORTHO05D004610 1.9e-83 313.5 295 56.3
Atru.chr7.1198 Acer truncatum HOM05D003948 ORTHO05D004610 5.4e-83 312.0 329 52.6
Hma1.2p1_0317F.1_g123650 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 5.4e-83 312.0 332 51.2
Actinidia01766 Actinidia chinensis HOM05D003948 ORTHO05D004610 7.1e-83 311.6 331 51.7
Actinidia40456 Actinidia chinensis HOM05D003948 ORTHO05D004610 1.2e-82 310.8 296 55.7
Haze_16515 Corylus avellana HOM05D003948 ORTHO05D004610 1.2e-82 310.8 327 53.8
Gorai.009G130200 Gossypium raimondii HOM05D003948 ORTHO05D004610 1.6e-82 310.5 307 53.7
Ciclev10008863m.g Citrus clementina HOM05D003948 ORTHO05D004610 2.1e-82 310.1 319 53.3
vmacro18966 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 2.1e-82 310.1 323 50.2
Gohir.A05G125200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 2.7e-82 309.7 307 54.7
Dinv41531 Davidia involucrata HOM05D003948 ORTHO05D004610 3.5e-82 309.3 246 62.2
Medtr2g103300 Medicago truncatula HOM05D003948 ORTHO05D004610 3.5e-82 309.3 303 53.5
CANSAT56G2529 Cannabis sativa HOM05D003948 ORTHO05D004610 1.7e-81 307.0 318 51.3
Cfa002007 Carpinus fangiana HOM05D003948 ORTHO05D004610 1.7e-81 307.0 325 53.2
Gohir.D05G126200 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.7e-81 307.0 307 54.4
Gorai.009G019200 Gossypium raimondii HOM05D003948 ORTHO05D004610 1.7e-81 307.0 316 52.2
Cpa.g.sc10.224 Carica papaya HOM05D003948 ORTHO05D004610 2.3e-81 306.6 284 55.3
Duzib187G0771 Durio zibethinus HOM05D003948 ORTHO05D004610 2.3e-81 306.6 329 52.0
Actinidia22003 Actinidia chinensis HOM05D003948 ORTHO05D004610 3.0e-81 306.2 329 51.7
GSVIVG01017270001 Vitis vinifera HOM05D003948 ORTHO05D004610 3.0e-81 306.2 250 60.8
Gohir.A05G017900 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.1e-80 304.3 317 51.7
CiPaw.01G244700 Carya illinoinensis HOM05D003948 ORTHO05D004610 1.5e-80 303.9 331 51.4
Hma1.2p1_0018F.1_g012660 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 1.5e-80 303.9 322 52.2
Hma1.2p1_0018F.1_g012640 Hydrangea macrophylla HOM05D003948 ORTHO05D004610 1.9e-80 303.5 250 62.8
Potri.003G061800 Populus trichocarpa HOM05D003948 ORTHO05D004610 2.5e-80 303.1 332 50.0
Gohir.D05G018800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 3.3e-80 302.8 317 52.1
Ca_01082_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 7.3e-80 301.6 310 51.6
Ah.01g011210 Amaranthus hybridus HOM05D003948 ORTHO05D004610 1.6e-79 300.4 327 49.2
Prupe.7G239700 Prunus persica HOM05D003948 ORTHO05D004610 1.6e-79 300.4 325 51.4
Rhsim01G0076600 Rhododendron simsii HOM05D003948 ORTHO05D004610 1.6e-79 300.4 318 51.9
Cpa.g.sc648.2 Carica papaya HOM05D003948 ORTHO05D004610 2.1e-79 300.1 298 54.0
Sed0015734 Sechium edule HOM05D003948 ORTHO05D004610 2.1e-79 300.1 320 48.1
ATR1156G038 Amborella trichopoda HOM05D003948 ORTHO05D004610 2.8e-79 299.7 312 51.0
EL10Ac9g21937 Beta vulgaris HOM05D003948 ORTHO05D004610 2.8e-79 299.7 332 48.5
Nitab4.5_0006574g0020 Nicotiana tabacum HOM05D003948 ORTHO05D004610 2.8e-79 299.7 315 50.8
Sed0014623 Sechium edule HOM05D003948 ORTHO05D004610 3.6e-79 299.3 288 54.2
Sopen03g035350 Solanum pennellii HOM05D003948 ORTHO05D004610 3.6e-79 299.3 292 51.0
ClCG07G012790 Citrullus lanatus HOM05D003948 ORTHO05D004610 4.7e-79 298.9 291 55.0
VMungo1080G0933 Vigna mungo HOM05D003948 ORTHO05D004610 4.7e-79 298.9 304 51.0
Gorai.001G040900 Gossypium raimondii HOM05D003948 ORTHO05D004610 6.2e-79 298.5 313 51.4
PGSC0003DMG402000630 Solanum tuberosum HOM05D003948 ORTHO05D004610 6.2e-79 298.5 300 50.7
PGR142G4293 Punica granatum HOM05D003948 ORTHO05D004610 8.1e-79 298.1 307 51.1
Gohir.A10G076166 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.1e-78 297.7 327 49.8
Gorai.011G081300 Gossypium raimondii HOM05D003948 ORTHO05D004610 1.1e-78 297.7 327 49.8
Gohir.A07G034800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 1.4e-78 297.4 316 50.6
Prupe.3G081000 Prunus persica HOM05D003948 ORTHO05D004610 1.4e-78 297.4 253 59.3
FAN28G1194 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.8e-78 297.0 251 59.8
Lj3g0025185 Lotus japonicus HOM05D003948 ORTHO05D004610 1.8e-78 297.0 282 53.5
PGR031G2458 Punica granatum HOM05D003948 ORTHO05D004610 1.8e-78 297.0 337 49.6
Nitab4.5_0002257g0010 Nicotiana tabacum HOM05D003948 ORTHO05D004610 2.4e-78 296.6 311 51.4
Sabra03G0035900 Salix brachista HOM05D003948 ORTHO05D004610 2.4e-78 296.6 323 48.9
FAN23G0975 Fragaria x ananassa HOM05D003948 ORTHO05D004610 3.1e-78 296.2 251 59.4
Psat5g301000 Pisum sativum HOM05D003948 ORTHO05D004610 3.1e-78 296.2 303 52.1
Thhalv10008186m.g Eutrema salsugineum HOM05D003948 ORTHO05D004610 5.2e-78 295.4 325 49.5
Glyma.13G363700 Glycine max HOM05D003948 ORTHO05D004610 5.2e-78 295.4 305 50.2
Gohir.D07G038800 Gossypium hirsutum HOM05D003948 ORTHO05D004610 6.9e-78 295.0 313 51.1
CAN.G407.106 Capsicum annuum HOM05D003948 ORTHO05D004610 9.0e-78 294.7 334 48.2
AUR62011555 Chenopodium quinoa HOM05D003948 ORTHO05D004610 9.0e-78 294.7 330 47.9
Peaxi162Scf00274g00859 Petunia axillaris HOM05D003948 ORTHO05D004610 9.0e-78 294.7 304 51.6
RcHm_v2.0_Chr2g0136511 Rosa chinensis HOM05D003948 ORTHO05D004610 1.2e-77 294.3 280 55.7
AUR62016374 Chenopodium quinoa HOM05D003948 ORTHO05D004610 2.0e-77 293.5 308 50.0
Solyc03g116460.4 Solanum lycopersicum HOM05D003948 ORTHO05D004610 2.0e-77 293.5 295 51.2
Rhsim01G0076700 Rhododendron simsii HOM05D003948 ORTHO05D004610 2.6e-77 293.1 311 50.8
Rhsim08G0216000 Rhododendron simsii HOM05D003948 ORTHO05D004610 2.6e-77 293.1 327 47.1
FvH4_1g03590 Fragaria vesca HOM05D003948 ORTHO05D004610 3.4e-77 292.7 323 50.8
AT1G15410 Arabidopsis thaliana HOM05D003948 ORTHO05D004610 5.8e-77 292.0 294 52.0
MELO3C017899.2 Cucumis melo HOM05D003948 ORTHO05D004610 5.8e-77 292.0 311 50.8
arahy.Tifrunner.gnm1.ann1.T1A9DJ Arachis hypogaea HOM05D003948 ORTHO05D004610 7.6e-77 291.6 309 50.5
Cc04_g04060 Coffea canephora HOM05D003948 ORTHO05D004610 7.6e-77 291.6 332 46.1
CsaV3_4G001410 Cucumis sativus L. HOM05D003948 ORTHO05D004610 7.6e-77 291.6 311 50.5
FAN19G2000 Fragaria x ananassa HOM05D003948 ORTHO05D004610 9.9e-77 291.2 323 50.5
RcHm_v2.0_Chr2g0089121 Rosa chinensis HOM05D003948 ORTHO05D004610 9.9e-77 291.2 330 49.4
THA.LOC104813569 Tarenaya hassleriana HOM05D003948 ORTHO05D004610 9.9e-77 291.2 321 49.5
Ciclev10026043m.g Citrus clementina HOM05D003948 ORTHO05D004610 1.3e-76 290.8 298 52.7
Eucgr.C01133 Eucalyptus grandis HOM05D003948 ORTHO05D004610 1.3e-76 290.8 274 55.1
Carub.0001s1520 Capsella rubella HOM05D003948 ORTHO05D004610 1.7e-76 290.4 294 51.0
Eucgr.J03052 Eucalyptus grandis HOM05D003948 ORTHO05D004610 1.7e-76 290.4 296 52.4
AL1G27520 Arabidopsis lyrata HOM05D003948 ORTHO05D004610 2.9e-76 289.7 294 51.7
arahy.Tifrunner.gnm1.ann1.VXE6AC Arachis hypogaea HOM05D003948 ORTHO05D004610 2.9e-76 289.7 309 50.2
Lalb_Chr22g0351001 Lupinus albus HOM05D003948 ORTHO05D004610 3.8e-76 289.3 331 49.5
ClCG06G010930 Citrullus lanatus HOM05D003948 ORTHO05D004610 1.1e-75 287.7 330 45.5
Cc06_g08780 Coffea canephora HOM05D003948 ORTHO05D004610 1.1e-75 287.7 317 52.1
arahy.Tifrunner.gnm1.ann1.37ZKFY Arachis hypogaea HOM05D003948 ORTHO05D004610 2.4e-75 286.6 288 53.1
arahy.Tifrunner.gnm1.ann1.U8XBHX Arachis hypogaea HOM05D003948 ORTHO05D004610 2.4e-75 286.6 288 53.1
DCAR_014870 Daucus carota HOM05D003948 ORTHO05D004610 2.4e-75 286.6 301 50.5
vmacro20597 Vaccinium macrocarpon HOM05D003948 ORTHO05D004610 2.4e-75 286.6 290 53.1
Hund06577 Selenicereus undatus HOM05D003948 ORTHO05D004610 3.2e-75 286.2 337 45.1
Haze_25613 Corylus avellana HOM05D003948 ORTHO05D004610 4.2e-75 285.8 323 49.8
Glyma.15G010100 Glycine max HOM05D003948 ORTHO05D004610 4.2e-75 285.8 305 48.9
MD17G1205400 Malus domestica HOM05D003948 ORTHO05D004610 5.4e-75 285.4 330 50.3
FAN14G0295 Fragaria x ananassa HOM05D003948 ORTHO05D004610 9.3e-75 284.6 254 57.1
Sp1g13770 Schrenkiella parvula HOM05D003948 ORTHO05D004610 9.3e-75 284.6 294 50.0
MD17G1205900 Malus domestica HOM05D003948 ORTHO05D004610 2.7e-74 283.1 331 50.2
Lj3g0004615 Lotus japonicus HOM05D003948 ORTHO05D004610 3.5e-74 282.7 319 49.5
A06p11460 Brassica napus HOM05D003948 ORTHO05D004610 6.0e-74 282.0 253 54.5
BraA06t24323Z Brassica rapa HOM05D003948 ORTHO05D004610 6.0e-74 282.0 253 54.5
FAN05G4627 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.0e-73 281.2 254 56.3
FAN26G0686 Fragaria x ananassa HOM05D003948 ORTHO05D004610 1.0e-73 281.2 344 48.0
CANSAT11G2309 Cannabis sativa HOM05D003948 ORTHO05D004610 1.7e-73 280.4 304 50.0
BcaC05g25483 Brassica carinata HOM05D003948 ORTHO05D004610 2.3e-73 280.0 307 48.9
MELO3C026644.2 Cucumis melo HOM05D003948 ORTHO05D004610 2.3e-73 280.0 330 44.8
TPR.G10716 Trifolium pratense HOM05D003948 ORTHO05D004610 2.3e-73 280.0 282 51.4
BolC5t30094H Brassica oleracea HOM05D003948 ORTHO05D004610 3.9e-73 279.3 263 53.2
Lsat_1_v5_gn_4_105880 Lactuca sativa HOM05D003948 ORTHO05D004610 3.9e-73 279.3 253 55.3
CSS0016874 Camellia sinensis var. sinensis HOM05D003948 ORTHO05D004610 5.1e-73 278.9 317 49.5
FAN02G3756 Fragaria x ananassa HOM05D003948 ORTHO05D004610 5.1e-73 278.9 278 53.2
Lj4g0000861 Lotus japonicus HOM05D003948 ORTHO05D004610 5.1e-73 278.9 318 48.1
Aqoxy7G02097 Aquilegia oxysepala HOM05D003948 ORTHO05D004610 6.6e-73 278.5 296 51.4
Medtr4g114000 Medicago truncatula HOM05D003948 ORTHO05D004610 6.6e-73 278.5 258 53.5
C05p13580 Brassica napus HOM05D003948 ORTHO05D004610 8.7e-73 278.1 263 53.2
Psat4g040400 Pisum sativum HOM05D003948 ORTHO05D004610 1.1e-72 277.7 313 46.6
DCAR_025486 Daucus carota HOM05D003948 ORTHO05D004610 7.3e-72 275.0 285 52.6
Phvul.003G162800 Phaseolus vulgaris HOM05D003948 ORTHO05D004610 9.6e-72 274.6 309 47.9
VMungo1215G2012 Vigna mungo HOM05D003948 ORTHO05D004610 6.2e-71 271.9 293 48.1
Glyma.17G116500 Glycine max HOM05D003948 ORTHO05D004610 1.1e-70 271.2 272 50.4
Glyma.05G008200 Glycine max HOM05D003948 ORTHO05D004610 9.0e-70 268.1 286 47.9
Lj7A632T42 Lonicera japonica HOM05D003948 ORTHO05D004610 1.5e-69 267.3 273 51.3
Ca_21696_v3 Cicer arietinum L. HOM05D003948 ORTHO05D004610 2.0e-69 266.9 276 48.9
MSTRG.11117 Avicennia marina HOM05D003948 ORTHO05D004610 3.4e-69 266.2 281 53.0
CDE02G2452 Ceratophyllum demersum HOM05D003948 ORTHO05D004610 3.8e-68 262.7 300 46.7
SEGI_16675 Sequoiadendron giganteum HOM05D003948 ORTHO05D004610 4.6e-66 255.8 289 48.8
SGA_v2.0_scaffold5G02657 Striga asiatica HOM05D003948 ORTHO05D004610 1.3e-63 247.7 274 48.9
Thecc.06G071300 Theobroma cacao HOM05D003948 ORTHO05D004610 6.9e-62 241.9 250 51.6
SalBow2G2418 Salvia bowleyana HOM05D003948 ORTHO05D004610 5.8e-61 238.8 249 50.6
Migut.D01056 Erythranthe guttata HOM05D003948 ORTHO05D004610 9.9e-61 238.0 322 41.9
GSVIVG01015502001 Vitis vinifera HOM05D003948 ORTHO05D004610 9.3e-59 231.5 162 66.7
Os01g0555200 Oryza sativa ssp. japonica HOM05D003948 ORTHO05D004610 1.2e-58 231.1 324 42.9
Mapoly0023s0100 Marchantia polymorpha HOM05D003948 ORTHO05D004610 2.1e-58 230.3 179 59.8
Sabra01G0139400 Salix brachista HOM05D003948 ORTHO05D004610 3.5e-58 229.6 349 41.3
Zm00001eb342320 Zea mays HOM05D003948 ORTHO05D004610 6.0e-58 228.8 306 43.5
Duzib235G1097 Durio zibethinus HOM05D003948 ORTHO05D004610 1.1e-56 224.6 250 49.2
SalBow2G0819 Salvia bowleyana HOM05D003948 ORTHO05D004610 5.6e-56 222.2 252 47.2
ECA232G2488 Erigeron canadensis HOM05D003948 ORTHO05D004610 3.7e-55 219.5 160 63.1
PSO170G0552 Papaver somniferum HOM05D003948 ORTHO05D004610 9.0e-54 214.9 260 45.8
Nn2g11965 Nelumbo nucifera HOM05D003948 ORTHO05D004610 1.5e-53 214.2 240 48.8
Gohir.D10G075401 Gossypium hirsutum HOM05D003948 ORTHO05D004610 9.0e-46 188.3 151 60.9
Rhsim03G0104000 Rhododendron simsii HOM05D003948 ORTHO05D004610 4.5e-45 186.0 154 56.5
MD02G1035500 Malus domestica HOM05D003948 ORTHO05D004610 2.7e-42 176.8 237 44.3
Sc18g0000700 Simmondsia chinensis HOM05D003948 ORTHO05D004610 8.8e-41 171.8 227 45.4
CARHR015960 Cardamine hirsuta HOM05D003948 ORTHO05D004610 5.7e-40 169.1 204 44.6
FvH4_6g30270 Fragaria vesca HOM05D003948 ORTHO05D004610 1.1e-38 164.9 161 51.6
SMO271G0179 Selaginella moellendorffii HOM05D003948 ORTHO05D004610 1.5e-32 144.4 253 34.0
Atru.chr1.3072 Acer truncatum HOM05D003948 ORTHO05D004610 2.8e-31 140.2 229 38.9
Dinv38099 Davidia involucrata HOM05D003948 ORTHO05D004610 3.7e-31 139.8 280 36.8
Phvul.005G175301 Phaseolus vulgaris HOM05D003948 ORTHO05D004610 4.1e-30 136.3 186 40.9
CARHR015950 Cardamine hirsuta HOM05D003948 ORTHO05D004610 5.0e-28 129.4 90 65.6
Lj5A69T36 Lonicera japonica HOM05D003948 ORTHO05D004610 1.1e-27 128.3 107 62.6
FAN26G3201 Fragaria x ananassa HOM05D003948 ORTHO05D004610 4.8e-23 112.8 76 71.1
Lj1g0003343 Lotus japonicus HOM05D003948 ORTHO05D004610 2.4e-22 110.5 88 62.5
Psat0s806g0040 Pisum sativum HOM05D003948 ORTHO05D004610 9.4e-19 98.6 124 42.7
Oeu041220.1 Olea europaea HOM05D003948 ORTHO05D004610 2.1e-18 97.4 77 62.3
DCAR_000573 Daucus carota HOM05D003948 ORTHO05D004610 1.4e-17 94.7 83 55.4
Peaxi162Scf00274g00858 Petunia axillaris HOM05D003948 ORTHO05D004610 8.2e-15 85.5 79 54.4
ClCG09G013940 Citrullus lanatus HOM05D003948 ORTHO05D004610 1.8e-09 67.8 56 55.4


User provided reference genes

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