Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AUR62033422 Chenopodium quinoa HOM05D001443 ORTHO05D001352 2.7e-167 592.4 419 100.0
AUR62011045 Chenopodium quinoa HOM05D001443 ORTHO05D001352 3.6e-148 528.9 420 91.4
EL10Ac8g18563 Beta vulgaris HOM05D001443 ORTHO05D001352 1.9e-112 410.2 421 64.4
Ah.09g227550 Amaranthus hybridus HOM05D001443 ORTHO05D001352 8.8e-94 348.2 459 53.6
Hund09167 Selenicereus undatus HOM05D001443 ORTHO05D001352 8.2e-84 315.1 304 63.5
Potri.019G072500 Populus trichocarpa HOM05D001443 ORTHO05D001352 3.7e-52 209.9 431 44.1
CSS0005108 Camellia sinensis var. sinensis HOM05D001443 ORTHO05D001352 1.4e-51 208.0 445 43.1
Prupe.1G442700 Prunus persica HOM05D001443 ORTHO05D001352 1.0e-49 201.8 309 51.1
Duzib268G0114 Durio zibethinus HOM05D001443 ORTHO05D001352 8.6e-49 198.7 437 49.0
Cfa008085 Carpinus fangiana HOM05D001443 ORTHO05D001352 9.5e-48 195.3 450 42.9
Haze_13952 Corylus avellana HOM05D001443 ORTHO05D001352 2.1e-47 194.1 450 44.7
Sabra19G0083900 Salix brachista HOM05D001443 ORTHO05D001352 4.7e-47 193.0 441 49.7
Potri.013G099800 Populus trichocarpa HOM05D001443 ORTHO05D001352 2.3e-46 190.7 432 47.0
Cpa.g.sc21.81 Carica papaya HOM05D001443 ORTHO05D001352 6.8e-46 189.1 453 39.1
Duzib116G0283 Durio zibethinus HOM05D001443 ORTHO05D001352 4.1e-43 179.9 443 46.3
CiPaw.03G015500 Carya illinoinensis HOM05D001443 ORTHO05D001352 9.2e-43 178.7 314 50.0
FvH4_2g35080 Fragaria vesca HOM05D001443 ORTHO05D001352 1.2e-42 178.3 451 44.6
FAN27G0488 Fragaria x ananassa HOM05D001443 ORTHO05D001352 1.6e-42 177.9 457 44.4
arahy.Tifrunner.gnm1.ann1.EVFJ1T Arachis hypogaea HOM05D001443 ORTHO05D001352 4.6e-42 176.4 442 42.8
Glyma.01G230700 Glycine max HOM05D001443 ORTHO05D001352 2.5e-40 170.6 440 50.9
VMungo1215G2872 Vigna mungo HOM05D001443 ORTHO05D001352 3.3e-40 170.2 449 44.8
COL.COLO4_24569 Corchorus olitorius HOM05D001443 ORTHO05D001352 1.2e-39 168.3 432 44.0
arahy.Tifrunner.gnm1.ann1.D93XQM Arachis hypogaea HOM05D001443 ORTHO05D001352 4.7e-39 166.4 451 40.6
Lj9A698G56 Lonicera japonica HOM05D001443 ORTHO05D001352 1.8e-38 164.5 305 45.6
Actinidia03525 Actinidia chinensis HOM05D001443 ORTHO05D001352 4.0e-38 163.3 431 37.8
Glyma.11G013900 Glycine max HOM05D001443 ORTHO05D001352 4.0e-38 163.3 442 37.3
Ca_24472_v3 Cicer arietinum L. HOM05D001443 ORTHO05D001352 1.5e-37 161.4 446 41.5
CSS0047769 Camellia sinensis var. sinensis HOM05D001443 ORTHO05D001352 5.8e-37 159.5 441 47.2
Manes.02G207700 Manihot esculenta HOM05D001443 ORTHO05D001352 5.8e-37 159.5 439 47.6
FAN15G2006 Fragaria x ananassa HOM05D001443 ORTHO05D001352 2.2e-36 157.5 456 41.7
TPR.G38046 Trifolium pratense HOM05D001443 ORTHO05D001352 3.7e-36 156.8 445 42.2
Lalb_Chr16g0376691 Lupinus albus HOM05D001443 ORTHO05D001352 4.9e-36 156.4 445 47.0
Phvul.002G036300 Phaseolus vulgaris HOM05D001443 ORTHO05D001352 1.4e-35 154.8 454 50.2
Gorai.009G267000 Gossypium raimondii HOM05D001443 ORTHO05D001352 2.4e-35 154.1 431 41.5
Gohir.A05G253600 Gossypium hirsutum HOM05D001443 ORTHO05D001352 7.1e-35 152.5 424 41.7
TWI75G1723 Tripterygium wilfordii HOM05D001443 ORTHO05D001352 7.1e-35 152.5 445 36.6
Hma1.2p1_0238F.1_g099710 Hydrangea macrophylla HOM05D001443 ORTHO05D001352 2.1e-34 151.0 311 50.2
Atru.chr13.2486 Acer truncatum HOM05D001443 ORTHO05D001352 3.5e-34 150.2 454 38.1
DCAR_014073 Daucus carota HOM05D001443 ORTHO05D001352 6.0e-34 149.4 300 46.0
FAN20G1854 Fragaria x ananassa HOM05D001443 ORTHO05D001352 1.0e-33 148.7 456 41.9
Lalb_Chr05g0211341 Lupinus albus HOM05D001443 ORTHO05D001352 1.1e-32 145.2 466 36.1
MD08G1108100 Malus domestica HOM05D001443 ORTHO05D001352 2.5e-32 144.1 186 54.3
Dinv22102 Davidia involucrata HOM05D001443 ORTHO05D001352 4.7e-31 139.8 120 66.7
Aqoxy5G00837 Aquilegia oxysepala HOM05D001443 ORTHO05D001352 1.1e-30 138.7 308 39.9
QL09p002054 Quercus lobata HOM05D001443 ORTHO05D001352 1.1e-30 138.7 458 39.5
LjContig00222g0010511 Lotus japonicus HOM05D001443 ORTHO05D001352 1.4e-30 138.3 261 42.5
CANSAT25G1707 Cannabis sativa HOM05D001443 ORTHO05D001352 1.8e-30 137.9 275 43.6
Actinidia29384 Actinidia chinensis HOM05D001443 ORTHO05D001352 2.4e-30 137.5 262 44.3
RcHm_v2.0_Chr6g0306891 Rosa chinensis HOM05D001443 ORTHO05D001352 3.1e-30 137.1 454 43.0
Gohir.A13G115900 Gossypium hirsutum HOM05D001443 ORTHO05D001352 4.0e-30 136.7 438 46.3
Eucgr.C00625 Eucalyptus grandis HOM05D001443 ORTHO05D001352 6.8e-30 136.0 302 41.4
Nn5g27279 Nelumbo nucifera HOM05D001443 ORTHO05D001352 6.8e-30 136.0 317 40.1
Gohir.D05G255600 Gossypium hirsutum HOM05D001443 ORTHO05D001352 3.4e-29 133.7 420 39.8
Sabra13G0085600 Salix brachista HOM05D001443 ORTHO05D001352 4.4e-29 133.3 302 47.7
TAR381G0091 Trochodendron aralioides HOM05D001443 ORTHO05D001352 1.7e-28 131.3 463 41.7
TAR624G1247 Trochodendron aralioides HOM05D001443 ORTHO05D001352 4.9e-28 129.8 304 39.8
MD15G1088800 Malus domestica HOM05D001443 ORTHO05D001352 6.4e-28 129.4 243 45.3
AL6G43850 Arabidopsis lyrata HOM05D001443 ORTHO05D001352 8.4e-28 129.0 312 39.1
Sp1g29050 Schrenkiella parvula HOM05D001443 ORTHO05D001352 1.9e-27 127.9 292 44.5
Carub.0006s2863 Capsella rubella HOM05D001443 ORTHO05D001352 4.2e-27 126.7 315 37.1
Psat2g187240 Pisum sativum HOM05D001443 ORTHO05D001352 4.2e-27 126.7 285 49.1
AT4G10070 Arabidopsis thaliana HOM05D001443 ORTHO05D001352 1.2e-26 125.2 303 38.9
ECA247G3095 Erigeron canadensis HOM05D001443 ORTHO05D001352 1.6e-26 124.8 415 42.4
Eucgr.I00053 Eucalyptus grandis HOM05D001443 ORTHO05D001352 2.7e-26 124.0 287 40.1
MELO3C022173.2 Cucumis melo HOM05D001443 ORTHO05D001352 1.7e-25 121.3 456 37.3
TWI12G1153 Tripterygium wilfordii HOM05D001443 ORTHO05D001352 3.0e-25 120.6 453 39.1
Oeu029090.2 Olea europaea HOM05D001443 ORTHO05D001352 3.9e-25 120.2 287 36.6
SalBow7G1995 Salvia bowleyana HOM05D001443 ORTHO05D001352 2.5e-24 117.5 317 38.8
CAN.G227.12 Capsicum annuum HOM05D001443 ORTHO05D001352 7.3e-24 115.9 441 34.2
Migut.C01374 Erythranthe guttata HOM05D001443 ORTHO05D001352 1.6e-23 114.8 439 37.1
THA.LOC104815830 Tarenaya hassleriana HOM05D001443 ORTHO05D001352 6.2e-23 112.8 293 43.0
Ciclev10018931m.g Citrus clementina HOM05D001443 ORTHO05D001352 1.4e-22 111.7 441 39.2
Sed0023582 Sechium edule HOM05D001443 ORTHO05D001352 1.4e-22 111.7 462 40.0
AL1G48090 Arabidopsis lyrata HOM05D001443 ORTHO05D001352 1.8e-22 111.3 327 37.3
Thecc.08G177400 Theobroma cacao HOM05D001443 ORTHO05D001352 3.1e-22 110.5 432 39.8
Gohir.D13G119100 Gossypium hirsutum HOM05D001443 ORTHO05D001352 5.2e-22 109.8 302 41.1
Sed0008630 Sechium edule HOM05D001443 ORTHO05D001352 9.0e-22 109.0 461 41.4
Thhalv10006898m.g Eutrema salsugineum HOM05D001443 ORTHO05D001352 1.2e-21 108.6 308 36.7
MBI06_g21946_MAGBIO Magnolia biondii HOM05D001443 ORTHO05D001352 2.6e-21 107.5 447 36.5
Sc26g0002200 Simmondsia chinensis HOM05D001443 ORTHO05D001352 2.6e-21 107.5 173 47.4
Peaxi162Scf00078g00548 Petunia axillaris HOM05D001443 ORTHO05D001352 5.8e-21 106.3 457 38.7
Gorai.013G133600 Gossypium raimondii HOM05D001443 ORTHO05D001352 9.9e-21 105.5 303 40.9
Dinv16105 Davidia involucrata HOM05D001443 ORTHO05D001352 3.8e-20 103.6 280 40.0
AT1G33680 Arabidopsis thaliana HOM05D001443 ORTHO05D001352 3.2e-19 100.5 314 45.9
Oeu013909.1 Olea europaea HOM05D001443 ORTHO05D001352 2.7e-18 97.4 296 35.1
Aa31LG6G8000 Aethionema arabicum HOM05D001443 ORTHO05D001352 2.3e-17 94.4 302 33.4
CsaV3_5G039940 Cucumis sativus L. HOM05D001443 ORTHO05D001352 2.3e-17 94.4 457 36.3
BcaB07g32996 Brassica carinata HOM05D001443 ORTHO05D001352 3.0e-17 94.0 291 37.8
Medtr5g008420 Medicago truncatula HOM05D001443 ORTHO05D001352 3.9e-17 93.6 437 48.7
Medtr7g010340 Medicago truncatula HOM05D001443 ORTHO05D001352 5.1e-17 93.2 176 42.6
Nitab4.5_0000213g0200 Nicotiana tabacum HOM05D001443 ORTHO05D001352 4.3e-16 90.1 296 40.2
CDE04G2080 Ceratophyllum demersum HOM05D001443 ORTHO05D001352 5.6e-16 89.7 314 35.7
C06p12290 Brassica napus HOM05D001443 ORTHO05D001352 1.3e-15 88.6 401 32.9
Hma1.2p1_0468F.1_g158710 Hydrangea macrophylla HOM05D001443 ORTHO05D001352 4.8e-15 86.7 447 37.1
CDE07G0800 Ceratophyllum demersum HOM05D001443 ORTHO05D001352 1.4e-14 85.1 311 37.3
Nitab4.5_0001155g0030 Nicotiana tabacum HOM05D001443 ORTHO05D001352 1.4e-14 85.1 329 35.6
Solyc11g040370.2 Solanum lycopersicum HOM05D001443 ORTHO05D001352 1.8e-14 84.7 438 32.6
Sopen11g018360 Solanum pennellii HOM05D001443 ORTHO05D001352 4.0e-14 83.6 438 32.6
Aa31LG9G11930 Aethionema arabicum HOM05D001443 ORTHO05D001352 6.9e-14 82.8 428 33.6
Cc10_g08730 Coffea canephora HOM05D001443 ORTHO05D001352 6.9e-14 82.8 438 45.4
A09p32700 Brassica napus HOM05D001443 ORTHO05D001352 9.0e-14 82.4 255 35.3
Rhsim08G0115800 Rhododendron simsii HOM05D001443 ORTHO05D001352 2.6e-13 80.9 448 31.7
CiPaw.04G009600 Carya illinoinensis HOM05D001443 ORTHO05D001352 7.6e-13 79.3 434 34.3
PGSC0003DMG400011914 Solanum tuberosum HOM05D001443 ORTHO05D001352 3.8e-12 77.0 436 31.2
BraA09t38810Z Brassica rapa HOM05D001443 ORTHO05D001352 6.4e-12 76.3 290 32.4
Lj7C421G5 Lonicera japonica HOM05D001443 ORTHO05D001352 6.4e-12 76.3 430 29.3
SGA_v2.0_scaffold24G10640 Striga asiatica HOM05D001443 ORTHO05D001352 6.4e-12 76.3 265 35.8
vmacro17838 Vaccinium macrocarpon HOM05D001443 ORTHO05D001352 8.4e-12 75.9 454 32.4
BcaC08g43847 Brassica carinata HOM05D001443 ORTHO05D001352 3.5e-10 70.5 408 31.1
BolC6t36380H Brassica oleracea HOM05D001443 ORTHO05D001352 3.5e-10 70.5 408 31.1
ECA232G0117 Erigeron canadensis HOM05D001443 ORTHO05D001352 3.0e-09 67.4 173 38.7
ATR1089G103 Amborella trichopoda HOM05D001443 ORTHO05D001352 8.1e-07 59.3 189 38.1
SGA_v2.0_scaffold118G32607 Striga asiatica HOM05D001443 ORTHO05D001352 1.1e-06 58.9 294 31.6


User provided reference genes

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